| Id Trinity | TRINITY_DN52681_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_465018 |
| Sequence | CGTGTCAAAGTTTACCGTCTGAATGATGATGGGAAATGGGACGACCAGGGTACTGGACATGCTGCTGTTGATTATTTGGAGGTTTGTACATATTTTGGAT TTGGGTGAAGCATTCACTTGTGACTGACATGCCTATTAAATTTTCTGGACTTCCCCTTGGTGAGATTGTTTATGTGGGCCCTGAGGCTTTTATCCTTGCA TTTCTTGTTACAAGATCAGCTATTTTTAATATATGTTCTCCTTAATGATGGGTGAATCCATTAATATTATTGATGTCCGTCTAGTACTGCTTTCTTATGA TATGTGATGATCATCATGTTTTCCCCTTCCTCCCCCACAATAAAATTGCCATTTAGTGTTAATGCGTTTTAGTAGTCAAGAGAGTAGGCGGTCAGTGAAT ATATTACTGTATTTAAGTGCATATAGGTGGTTTTTCATTTCTAATGGATCAAAATTTAAGTTCCCTTGCATTTTCAATTAATGAAAAATTATAATGCAGC ACCCAGAAGAGTTGGGTTTATTTGTTTATGATGAAGAAGAGAACGAGACCATACTTTTGCATCGCATCAGTTCTGATGATATTTATAGGAAGCAAGAAGA TACAATTATCTCATGGAGAGATCTAGAATATGCTACAGAACTGGCACTTAGCTTTCATGAGACTACTGGCTGCTCTTACATATGGGACCTCATTTGCAAT GTGCAGAGGAATATGCATTTTAATACGTTAAATAGTGAGCCATTTCACAGTGTTAACAGCCAGTTGAGGGAGTTGCCTGCTGTTGAATTATCCACACTCC CTTTGATTATTAAGACTGTCGTTGACAGTGGCATTGCAGACCAGTTGCGGCTTACAGAACTAATTTTAAATGATCAAGAATTTTTACCAAAGCTGGTAGA AGTATTCAGAGTTTGTGAAGACTTGGAAAATATGGCTGGCCTTCACATGATTTTTGAAATAGTCAAAGGGATCATTTTGCTTAATAGTACACCAATTTTT GATAGAATCTTCAGCGATâBLAST |
| Tissue | pods |
| Gene name | LI_gene_194671; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465018
| Blastp | Serine/threonine-protein phosphatase 4 regulatory subunit 3 from Xenopus with 39.66% of identity |
|---|---|
| Blastx | Serine/threonine-protein phosphatase 4 regulatory subunit 3 from Xenopus with 39.66% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (432127) |
| CantataDB | Link to cantataDB annotations (CNT0001838) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462469.1) |
| Pfam | Component of IIS longevity pathway SMK-1 (PF04802.14) |
| Rfam | - |
| GO | - |