Id Trinity | TRINITY_DN52681_c1_g3_i4 |
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Name Transcript | Ll_transcript_465048 |
Sequence | TGTGGTTTCATCTATACACGTGTTGTTCAACCCATCATCACTTTCTCCATACATAACATAATAACATACTATACTTTCTTTGTTGCAATTCATTTGTTCC AAAAACAGACAGAGAAAATAACATCATCAATCATTGTTTTTGTTATTGTTATTGTTTGAAGATGAATCTTAAGACAAGCTGTAACTTGGAAACAAGGTCT TTGCTTGATGAAGTTTGTAACTTTGAGAAAGGAACACTCTTCGATCTTGGCCACCCTCTTCTCAACCGCATCACTCATTGTTTCCTCAATGCTGCTGGGA TTGGAGCGGTTCAAGCTATGGCCCGTGATGCTTATCTCACTGCTATCCAAGGTACCGGGGTTGATGGTATACCACCAGAAAGTTCATCTCTCAAGAAACA TGCTTTCCCAGGTCTTAGAGGAGAGACAAGCAACAAATCTCTTGAGGCCATGGTGAAGAGCACCGGAAAAGAGTCCTTACAGTGGGGATTGGCTGCAGGA ATGTATTCAGGTCTTACATATGGGCTCAAAGAAGCTCGTGGAGTTCATGATTGGAAAAACAGTGCAGTTGCAGGAGCAATAACTGGGGCAACCCTTGCAC TAACATTGGAAGACTCCACTCATGAACATATTATGCAGTGTGCTATCACTGGGGCTGCTATCTCCACTGCTGCAAATCTTCTCACTGGAATTTTCTAAAT GGGTTCTACTTCTTTTTAGATCAGTAATTTGGTTTCTGAATTATGTCACTTATGGGTACATATTTAAGATGAACTTGCTTTTTAAATTTCAAGTTGTCAT TGGTGACTTCCTTGTCAAAGGGTTTCAAATTATTGTTGCTTAGCCAAAGTAAGCCTATTTTCTCAATAATAACTCTTCATCTACTACAAAATAATCTCAA TATGAAAGCTTTTAGGAGTTTTTTAGCATACACTGTTTTATGTCTAATTGTTCTCTCTGGCAAATAAGTTCTTTGAATTTGAAGTTGATTTCTTATGGGC ATAAAATTCTTTGGCTGTTCAAGAAATCATTCTCATTCAG BLAST |
Tissue | pods |
Gene name | LI_gene_194675; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465048
Blastp | Outer envelope pore protein 16-2, chloroplastic from Arabidopsis with 61.85% of identity |
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Blastx | Outer envelope pore protein 16-2, chloroplastic from Arabidopsis with 60.12% of identity |
Eggnog | Mitochondrial import inner membrane translocase subunit Tim17 Tim22 Tim23 family protein(ENOG410YI0M) |
Kegg | Link to kegg annotations (AT4G16160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418806.1) |
Pfam | Tim17/Tim22/Tim23/Pmp24 family (PF02466.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |