Id Trinity | TRINITY_DN52683_c1_g2_i16 |
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Name Transcript | Ll_transcript_464193 |
Sequence | AAGATGATGAATCTTGTGAAAGAAACATTGAAATGACATTTTCCATTCCCACATTTCTCTCTCTTTCCCTTTTTCTTCTCTTCCTTTCCCATTCCATCAT TTCACTTTCACTTCTCTCCCTTCTCTCTCTAAAACTCTTCTTCATTACTTTCTCTCTCTAAAACTCTTCATGTGAATTAATTTTCTTCAATGTTCTGTTC CCTCTTCCTTCGTATCTTCCTTCTCCTTCTCCAGAAACTCCGGAACGCGGTTCTCACTGTTTCGTTCAGTTTCTAGCTTAATTGAGCTTGATCCTCTGCG CGCAAAACGAGTCGTTTTTGGATTTTAGCGTTGTGTCCTATTCAGAAACTGTATGATAAAAGATGAGACGGATGAAGAACGAGATTGAAGATGAGATGCT CCCCAACAATATGACAGAATCACAGTTGAATGATGAGGGTAATGGAGGAAGTGGCAGCATAGTTGTTCTGAAGAAAGGTCCATGGACATCTGCTGAAGAT GCGATTTTGGTTGATTATGTCAAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGCATGCAGGCCTGTCGCGTTGCGGAAAAAGTTGCCGATTGC GGTGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGGGCGTTTACTGCACAAGAGGAGCGCTTAATTACTGAACTTCACGCAAAAATGGGAAACAAGTG GGCACGCATGTCAGCACATTTGCCTGGTCGCACAGATAATGAGATAAAGAACTACTGGAACACCCGAGCCAAGAGGCGTCAACGGGCTGGCTTGCCACTT TATTCTCCTGAAGTGTGTTCGCCAGCAGTCCAAGAGAGCCATCAAAGCCAAAGCACTGATGGAGTTAATGGTGGCAATAAAGTGCATCATGATTTGTTGA ACAGTTATGAGATACATGATGCAATAATTGACAGTGTGAAGGATAACCAGGGAATCTCACCTTATGTTCCTGAGCCTCCTGATATTTCTGATTATAACAA TATGCTGAAAGGCCTTGATTCTTCTCAGTACTGTAACTTTACATCATCAACATCACCTAACCATAAGCGTCTTCGAGAGTCAACAATGCCATTTTTTGGT TCCAGTTGTATGAGCACAAATTTGTTTTATCCATTTGATCATATTCGGGCTAACACCTCTGATAAGATTGCACAATCATTTGGAATGCAATCACCCCTTG ATCATGGCCCCTCCTTACACAGCTCAATGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCAAAGCCTACTTATGAGGCTGTGAAGCTGGA GCTCCCTTCACTCCAATATCCGGAAATTGATTTAGGTAGCTGGGGTACATCTCCCCCACCTCCTTTGCTTGATTCGGTTGATGATTTCATTCAGTCTCCT GCACCAATTAGTGCAATGGAGTCAGATAGTTCTTCCCCACATAATAGTGGCCTTCTGGATGCTTTAGTTTATCAGGCAAAGACTATGAGCAGCTCCAAGA ACTATTATTCTAACAAGAGTTCAAACTCATCTACTGCAACTCCTGGTCACAGAGCAGACAGCTCCACGCTGAACATGTACGAAACAGAATTGGAAGACCA TACTGACCCTGTATCTCCATTTGGTGCAACTTCAATATTGAATGAATGCCCTGCTGTTGCCAATGCAAATTCATTTGATGAAACGCCGCCTGATCGGACC TTCAATGGTAACATTGTGAAATTAGAGTCTGCTGACCAGGTTTGGACCCCGAACAGTGAAAATCAAAACATGTCTGAATTGAATATTACTAGGCCAGACT TGTTGCTTGATGCAGATTGGCTCCAACAGGATTCTGGACATGGCAACAACCAAGCCATCACGACCGATGCTATCTCAACCCTTTTTGCAGATGATTTAGC CACTGACTACAAGCAAATGATTGTTGGAACTTCTAAGTCGAGTCAGGTATGGGGCTTTGGTTCTTGTGCTCGGAACAACAATGCCTTCTGTCTGTCTGGT GTCTGATGTCGGTGAAGAAAAAACTATGAGATGTGTGGTTTGAAACTTTTTCAGAATTATAATCATGTTGCTTTTTAACATGGTAGCCAGGAGTTAATAT TTTCCTCGGGTGAAAGATTTTGTATTGGTGTGAGTTATAGCACCAAATACTTGGTCTGAGACTGGTGTTTTCTTGTAGCTTTATCATTTTTTTTCTTTAG GCATTGCATGTGTTGTATACCAGCATGAAACTGTGTACACAGCTGCTTTTCCAGACTTTTAATTTTTAATTTTTAGAATAACATTGCATTTGGAACATTG GACTGAACTTAGCTATAGATGGATTAAGAATGTGATACAACTGGATTTCCTTGCACGTTTTAACCTATAACCTTTTACAGACAAAAAGTAGTTATCTGCA TTTTTTTGGGTCTAAACCATTGTAGGAGACAAT BLAST |
Tissue | pods |
Gene name | LI_gene_194696; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464193
Blastp | Transcription factor MYB33 from Arabidopsis with 42.08% of identity |
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Blastx | Transcription factor MYB33 from Arabidopsis with 41.89% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (AT5G06100) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434761.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |