Ll_transcript_464173

• Id Trinity: TRINITY_DN52683_c1_g2_i3
• Name Transcript: Ll_transcript_464173
• Sequence: AAGATGATGAATCTTGTGAAAGAAACATTGAAATGACATTTTCCATTCCCACATTTCTCTCTCTTTCCCTTTTTCTTCTCTTCCTTTCCCATTCCATCAT TTCACTTTCACTTCTCTCCCTTCTCTCTCTAAAACTCTTCTTCATTACTTTCTCTCTCTAAAACTCTTCATGTGAATTAATTTTCTTCAATGTTCTGTTC CCTCTTCCTTCGTATCTTCCTTCTCCTTCTCCAGAAACTCCGGAACGCGGTTCTCACTGTTTCGTTCAGTTTCTAGCTTAATTGAGCTTGATCCTCTGCG CGCAAAACGAGTCGTTTTTGGATTTTAGCGTTGTGTCCTATTCAGAAACTGTATGATAAAAGATGAGACGGATGAAGAACGAGATTGAAGATGAGATGCT CCCCAACAATATGACAGAATCACAGTTGAATGATGAGGGTAATGGAGGAAGTGGCAGCATAGTTGTTCTGAAGAAAGGTCCATGGACATCTGCTGAAGAT GCGATTTTGGTTGATTATGTCAAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGCATGCAGGCCTGTCGCGTTGCGGAAAAAGTTGCCGATTGC GGTGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGGGCGTTTACTGCACAAGAGGAGCGCTTAATTACTGAACTTCACGCAAAAATGGGAAACAAGTG GGCACGCATGTCAGCACATTTGCCTGGTCGCACAGATAATGAGATAAAGAACTACTGGAACACCCGAGCCAAGAGGCGTCAACGGGCTGGCTTGCCACTT TATTCTCCTGAAGTGTGTTCGCCAGCAGTCCAAGAGAGCCATCAAAGCCAAAGCACTGATGGAGTTAATGGTGGCAATAAAGTGCATCATGATTTGTTGA ACAGTTATGAGATACATGATGCAATAATTGACAGTGTGAAGGATAACCAGGGAATCTCACCTTATGTTCCTGAGCCTCCTGATATTTCTGATTATAACAA TATGCTGAAAGGCCTTGATTCTTCTCAGTACTGTAACTTTACATCATCAACATCACCTAACCATAAGCGTCTTCGAGAGTCAACAATGCCATTTTTTGGT TCCAGTTGTATGAGCACAAATTTGTTTTATCCATTTGATCATATTCGGGCTAACACCTCTGATAAGATTGCACAATCATTTGGAATGCAATCACCCCTTG ATCATGGCCCCTCCTTACACAGCTCAATGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTTCTGAGGCTGTGAAGCTAGA GCTCCCTTCACTCCAATATCCAGAAATTGATTTAGGTAGCTGGGGTACATCTCCCCCACTTCCTTTGCTTGATTCGGTTGATGATTTCATTAAGTATCCT ACACCAATTAGTACAATGGAGTCAGATTGTTCTTCCCCACAGAATAATGGCCTTCTGGATGCTTTAGTTTATCAGGCAAAGACTATGAGCAGTTCCAAGA AACATTATTCTGATGAGATTTCAAACTCATCTACTGCAATTCCTGGTCACAGAGCGGACAGCTCCACATTGAACATGTACGAGACAGAATTGGAAGACTA TGCTGACCCTGTATCTCCGTTTGGTGCAACTTCAATATTGAATGAATGCCCTGTTATTGCCAATGCAAATTCATTGGATGAAACTCCACTCGATCAGACC TTCAATGGTAACAGTGAAAACCAAACCATGTCTGTGTTAAATATTACTTGGCCGGACATTTTGCTTGATGAAGATTGGCTCCAGCAGGATTCTGGTAATG GCAAGAACCAAACCATCACAACTGATGCTATGTCAACCCTTTTCGGAGATGATTTAGCCACTGACTACAAGCATATGACTGATGGAACTTCTAAGTCTAG TCAGGTATGGGGCTTTGGTTCTTGCGCACGGAACCACAGTGCCTTCTGTCTGTCAGGTGTCTGATCCCGATTGCGAAAAAGGTGAGATGTGTGGTTTGAA ACATTTTCATAATTGTAATCACGTTTGATTTTTAACATGGTAGCCAGGAGTTAATATCTCGTGGGCTGAAAGATTTTATATTGGTGTGATTTATAGTACC AAATACTTAGTCTGAGACTGGTGTTTTCTTGTAGCTTTATCAATTTTTTTCTTTTGGTGTTGAGTGTTGTATACCAGCATGAATCTTGTGTCCACAGTTC TGCTTTTGAAGGTTTTTTATTATTGTGTAGAATAACATTACATTTTTAATGGAATAAAACTTGCTTATTAAAAAACCAAA
• Tissue: pods
• Gene name: LI_gene_194696;
• Additional information: details;

Expression of Ll_transcript_464173

FPKM

• PAB: 2.8
• PNAB: 1.6
• PS1: 4.6
• PS2: 2.7
• PS3: 3.7
• PW1: 1.3
• PW2: 1.2
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464173

• Blastp: Transcription factor MYB33 from Arabidopsis with 42.51% of identity
• Blastx: Transcription factor MYB33 from Arabidopsis with 42.51% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (AT5G06100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434761.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;