Ll_transcript_464174

• Id Trinity: TRINITY_DN52683_c1_g2_i4
• Name Transcript: Ll_transcript_464174
• Sequence: AAGATGATGAATCTTGTGAAAGAAACATTGAAATGACATTTTCCATTCCCACATTTCTCTCTCTTTCCCTTTTTCTTCTCTTCCTTTCCCATTCCATCAT TTCACTTTCACTTCTCTCCCTTCTCTCTCTAAAACTCTTCTTCATTACTTTCTCTCTCTAAAACTCTTCATGTGAATTAATTTTCTTCAATGTTCTGTTC CCTCTTCCTTCGTATCTTCCTTCTCCTTCTCCAGAAACTCCGGAACGCGGTTCTCACTGTTTCGTTCAGTTTCTAGCTTAATTGAGCTTGATCCTCTGCG CGCAAAACGAGTCGTTTTTGGATTTTAGCGTTGTGTCCTATTCAGAAACTGTATGATAAAAGATGAGACGGATGAAGAACGAGATTGAAGATGAGATGCT CCCCAACAATATGACAGAATCACAGTTGAATGATGAGGGTAATGGAGGAAGTGGCAGCATAGTTGTTCTGAAGAAAGGTCCATGGACATCTGCTGAAGAT GCGATTTTGGTTGATTATGTCAAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGCATGCAGGCCTGTCGCGTTGCGGAAAAAGTTGCCGATTGC GGTGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGGGCGTTTACTGCACAAGAGGAGCGCTTAATTACTGAACTTCACGCAAAAATGGGAAACAAGTG GGCACGCATGGCAGCGCACTTGCCTGGTCGCACTGACAATGAGATAAAGAACTACTGGAACACCCGATCCAAGAGGCGTCAACGGGCTGGCTTGCCACTT TATCCTCTTGAAGCGTGTTCTCAAGCATTCCCAGAGAGTCAACAAAGGCAAAGCACTCGTGGAGGAGTTAATGCTGGCAATAAAGTGCATCATGATTTCT TGCACAAAAACAGTTATGAGATACATGATGCAATATTTGACAGTTTGAAGGATAACCAGGGAATCTCACCTTATGTGCCTGAGCTTCCTGATATTTCTGA TCATAGCAATATGCTAAAAGATCTTGATTCTTCTCAGTACTTTAATTTTGTGCCGTCAACATCACCTAACCATAAGCGTCTTCGAGAGTCAACAATGCCA TTTCTTGGTTCTAGTGATTGTGATATGCACAGAAATGTGTTTTATCCATTTGATCATATTCAGGATAATGCCTCGTTTGGAATGCAATCACCCCTTGATT ATGGTCCCTCCTCACACAGCTCAATGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTTATGAGGCTTTGAAGCTAGAGCT CCCTTCACTCCAATATCCAGATATTGATTTAGGTAGCTGGGGTACGTCTCCCCCACCTCCTTTGCTTGATACGGTTGATGATTTCATTCAGTCTCCCACA CCAATAAGTGCAATGGAGTCAGATAGTTCTTCCCCACAAAATAGTGGCCTTCTGGATGCTCTACTTTATCAGGCAAAGACTATGAGCAGTTCCAAGAACC ATTATTCTGACAAGAGTTCAAACTCATCTACTGCAACTCCTGGCCACAGAGCAGACAGCTCTATGTTGAACATGTGCGAGACGGAATGGGAAGACAATAC TGACCCTGTGTCTCCATTTGGTGCAACTTCTATATTGAATGAATGTCCTGCTGTTGCCAATGCAAATTCATTGGATGAAACACCACCCGGTCAGACCTTC AATGGTTAGTGCCTTTCAGTGTGCCTGTGTGGCATGAATGATGGTCATTGAAAACACTTCCAAACATTTATACTCATGTTCAGATGCATCTTAAGTACAA ACTGAAACTTGCTAATTACTTTGGAAATTTCCCGTTCTATTATTTTGGTCATTGTTTTATATGGTGCCAAATATATTCCTAAAATCTGTTAAAAAATAAT TGATGATCTTTTTTTATCAAATTAGACTTCATGAAACTCTATTTTACTCCAGAAAGCATACAAAGTCTTCATGCACATATAGTTTTTATTTTCTGCGATA GTTGAGGCAGCCCAATGAACAAGGTTCTCATCTAGTGGGGTCTGTGGATGGTAGATATGTGCAGCCTTATCACCACAAGCGAAGAGACTCTTTCTAATAT TTGAACATATGACCTTCAGGTCACAAGGCAAATAATCTTTTTGTTGTACTGAGGTCACCCTCTTTATTTTCTGTGATAGTTAGCATCATAAAAAAATTCA TCTATCATTTTTTATGAAAATGCATGTATTAGGTTTTCTCGTTAATTCCTATATTTTATCAATCACCCAGATTCTCAAGATCTATAGATATTCTATTAAA AGTTGAGGGTTTATTTGGATTTCATGCAGGGAATATTGTGAAATTAGAGTCTGCTGACCAGGTTTGGACCCCAAGCAGTGGAAATCAAACCATGTCTATG TTAAATTTTACTCGGCCAGACTTGTTGCTTGATGCAGATTGGACAGGATTCTGGGCATGTCAAGAACCAAACAATCACAACTGATGCTATATCAACCCTT TTAGGAGATGATTTAGCCACCCACTACAAGCATATGAGTGCTGGAATTTCTAAGTCATGTCAGGTATGGGGCTTTGGTTTTTCTGCACAGAACAGTGCTC TTCCTGTCTGGCCGATGTCTGATCTAGGTCAAGAAAAATGCTATGACATTTTTGTTTGAAACTTATTCATAATTGTAATAATGTTGATTTTTTAATATGG TAGCCAGGGGGTAATATCTCCTATACTGAGATTTTATATTGGGTGATTTATAGTTTGAAATAATTGGTCTGAGACAGGTGTTTTCTTGTAGCTTTATCAA TTGTTTTCTTCTGGTGTTGCATGTGTTGTATACCACCATGAATCTTGTTCTACACTGATGCTTTTGCAGGCTTTTTATTAATATGTAGAATAAGTGAACA TTACCTTTCTAAAA
• Tissue: pods
• Gene name: LI_gene_194696;
• Additional information: details;

Expression of Ll_transcript_464174

FPKM

• PAB: 0.4
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.4
• PS3: 0.2
• PW1: 0.3
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464174

• Blastp: Transcription factor GAMYB from Oryza sativa with 45.02% of identity
• Blastx: Transcription factor GAMYB from Oryza sativa with 44.42% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449331.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;