Ll_transcript_464182

• Id Trinity: TRINITY_DN52683_c1_g2_i9
• Name Transcript: Ll_transcript_464182
• Sequence: AAGATGATGAATCTTGTGAAAGAAACATTGAAATGACATTTTCCATTCCCACATTTCTCTCTCTTTCCCTTTTTCTTCTCTTCCTTTCCCATTCCATCAT TTCACTTTCACTTCTCTCCCTTCTCTCTCTAAAACTCTTCTTCATTACTTTCTCTCTCTAAAACTCTTCATGTGAATTAATTTTCTTCAATGTTCTGTTC CCTCTTCCTTCGTATCTTCCTTCTCCTTCTCCAGAAACTCCGGAACGCGGTTCTCACTGTTTCGTTCAGTTTCTAGCTTAATTGAGCTTGATCCTCTGCG CGCAAAACGAGTCGTTTTTGGATTTTAGCGTTGTGTCCTATTCAGAAACTGTATGATAAAAGATGAGACGGATGAAGAACGAGATTGAAGATGAGATGCT CCCCAACAATATGACAGAATCACAGTTGAATGATGAGGGTAATGGAGGAAGTGGCAGCATAGTTGTTCTGAAGAAAGGTCCATGGACATCTGCTGAAGAT GCGATTTTGGTTGATTATGTCAAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGCATGCAGGCCTGTCGCGTTGCGGAAAAAGTTGCCGATTGC GGTGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGGGCGTTTACTGCACAAGAGGAGCGCTTAATTACTGAACTTCACGCAAAAATGGGAAACAAGTG GGCACGCATGTCAGCACATTTGCCTGGTCGCACAGATAATGAGATAAAGAACTACTGGAACACCCGAGCCAAGAGGCGTCAACGGGCTGGCTTGCCACTT TATTCTCCTGAAGTGTGTTCGCCAGCAGTCCAAGAGAGCCATCAAAGCCAAAGCACTGATGGAGTTAATGGTGGCAATAAAGTGCATCATGATTTGTTGA ACAGTTATGAGATACATGATGCAATAATTGACAGTGTGAAGGATAACCAGGGAATCTCACCTTATGTTCCTGAGCCTCCTGATATTTCTGATTATAACAA TATGCTGAAAGGCCTTGATTCTTCTCAGTACTGTAACTTTACATCATCAACATCACCTAACCATAAGCGTCTTCGAGAGTCAACAATGCCATTTTTTGGT TCCAGTTGTATGAGCACAAATTTGTTTTATCCATTTGATCATATTCGGGCTAACACCTCTGATAAGATTGCACAATCATTTGGAATGCAATCACCCCTTG ATCATGGCCCCTCCTTACACAGCTCAATGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTTCTGAGGCTGTGAAGCTAGA GCTCCCTTCACTCCAATATCCAGAAATTGATTTAGGTAGCTGGGGTACATCTCCCCCACTTCCTTTGCTTGATTCGGTTGATGATTTCATTAAGTATCCT ACACCAATTAGTACAATGGAGTCAGATTGTTCTTCCCCACAGAATAATGGCCTTCTGGATGCTTTAGTTTATCAGGCAAAGACTATGAGCAGTTCCAAGA AACATTATTCTGATGAGATTTCAAACTCATCTACTGCAATTCCTGGTCACAGAGCGGACAGCTCCACATTGAACATGTACGAGACAGAATTGGAAGACTA TGCTGACCCTGTATCTCCGTTTGGTGCAACTTCAATATTGAATGAATGCCCTGTTATTGCCAATGCAAATTCATTGGATGAAACTCCACTCGATCAGACC TTCAATGGTTAGTGCCTTTCAGTGTGTGCCTGTGTGGCATGAAGGATGATCATTGAAAACACTTCCCCAATCATTTATACTCACATTCACATGCATCTTT AGCACAAAGGGAAACCTGTTAAATTTTGCAGATTTCCTGTTCCATTATTTTGGTTATTGTTTTATAGTGACAAATATATTCCTAAAATCGGAGTTTTAAA ATAATTGATGAATCTTTTTTATCAAATAAGATTTGATGAAAATCTCTTTTACTTTAAAGTATACACAGTCTCCATGCATAGATACAACAACAGTCTTCTG CATATGCAATTACACAGTCTTCATGCACATATACAACAGCACTGTCTTCATGCACAGATACAACAGCACTGTCTTCATGCACAGATAGTACTTTTATTTT CTATCATAGTTGGATCACAAAAATTTTCCCATTTATTAGTTTTTCTTAAAATGCATGTGTTAGGCTTCCTGGTTATTCATGTTATATGAAAAGATGACAG TTTATTTGGATTTCACGCAGGTAACAGTGAAAACCAAACCATGTCTGTGTTAAATATTACTTGGCCGGACATTTTGCTTGATGAAGATTGGCTCCAGCAG GATTCTGGTAATGGCAAGAACCAAACCATCACAACTGATGCTATGTCAACCCTTTTCGGAGATGATTTAGCCACTGACTACAAGCATATGACTGATGGAA CTTCTAAGTCTAGTCAGGTATGGGGCTTTGGTTCTTGCGCACGGAACCACAGTGCCTTCTGTCTGTCAGGTGTCTGATCCCGATTGCGAAAAAGGTGAGA TGTGTGGTTTGAAACATTTTCATAATTGTAATCACGTTTGATTTTTAACATGGTAGCCAGGAGTTAATATCTCGTGGGCTGAAAGATTTTATATTGGTGT GATTTATAGTACCAAATACTTAGTCTGAGACTGGTGTTTTCTTGTAGCTTTATCAATTTTTTTCTTTTGGTGTTGAGTGTTGTATACCAGCATGAATCTT GTGTCCACAGTTCTGCTTTTGAAGGTTTTTTATTATTGTGTAGAATAACATTACATTTTTAATGGAATAAAACTTGCTTATTAAAAAACCAAA
• Tissue: pods
• Gene name: LI_gene_194696;
• Additional information: details;

Expression of Ll_transcript_464182

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.3
• PS3: 0.3
• PW1: 0
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464182

• Blastp: Transcription factor GAMYB from Oryza sativa with 46.46% of identity
• Blastx: Transcription factor GAMYB from Oryza sativa with 46.27% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434761.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;