Id Trinity | TRINITY_DN52689_c1_g1_i20 |
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Name Transcript | Ll_transcript_462725 |
Sequence | CTTTCATCCGCGATTCCCTCTTCACTCATGACCCAACAACCCATCTCCACCTTCTCCTCTCTTAACAGCGGCAGTGGTGGTCATAGAAGCTACAATGGTG GCGCCACCTATTCTTCCTCTTCTCGATGGTGTACCTTCTTTGAATTCGGTTTTCACCTTCGATCATCTTCACCGATTTTTGGTTTCCCTTCTCATTGCTA TGTCGTTGGTGATGGAATTCTGGTCCCATAACGCCCATCGGTTGGAGGTAAGAATCTCTCCCTCATCTTCCTCTTTTGATATCATCTTAGATTAGGGTTA CGGTTTAACCCCTTTTTTGGCCCAGCGATAACGACGACACATAAGGACCACCAACGGAGGGTGGTCACGATGGTGATACGGTTTCAGTCATAGATGGCTC GTGGCTGGCACAGTAACATCCCAAATGGCCCACTGATGCCGAATGAACCCAACTGGATTCGCAATGACATCCAGATAGGTGGACCAGAACACCTTCTTTA CTTGCTGAAGCCAACCACAAATTCAAGAAGCCTATTCAGATGCATTGTGGCAAATCAAATTGACATCCAGTGAAACAATGGAAGCCGGAACTTATCCAGA GCGTCCTGGAGAGCCAGATTGTTCATATTACATCAGAACAGGCCTTTGTAGATTTGGAGCAACATGTCGATTTAATCACCCTCCTAACAGGAAGCTGGCT ATTGCAACGGCAAGGATGAAAGGCGAATTCCCAGAAAGAATAGGGCAACCAGAATGTCAGGCATGTACTAGTTTCTCAATATGCATAAGGTGCATATTGC ATGTTTATGTGTATGATTCGGGAATCTACTCGTTTTAAGTACTATTTGAAGACTGGAACTTGCAAATTTGGAGCTACATGCAAGTTTCATCATCCAAGAG AACAGGCTGGGAGTGCTGGAAGAGTTGCCTTAAATACTTTAGGCTATCCACTCCACCCTAATGAGCCTGAATGCACTTATTATTTAAGAACAGGACAGTG TAAATTTGGGAACACTTGCAAATTCCACCATCCTCAACCAAGTAATATGATTCTTTCATTAAGGGGTTCTCCTGTTTATCCTACTGTCCAATCTCCAACT GCACCAGGTCAGCAATCATATGCTGGAGGAATTGCAAATTGGTCAAGAACATCTTATATTGCTAGTCCACGCTGGCAAGGCCCTTCAAGCTATACACCTT TAGTTCTACCTCAAGGAGTGGTCTCAGTGCCTGGGTGGAGTGCATACAGTGGTCAAATGAGATCAATCTCTGCTTCCGATAGTCCACAACAAATAATAGG AGATGGTCAGACATATGGAACTTCTCGCCAAGATGAAGTAGCAAATGCAGGATCACAAGGGGAATATTCTCAATTTCGTTCTGGCTCTGTTCCTGTAGGG TTTTATGCGTTGCAGAGGGAGAACATATTTCCTGAGAGACCTGGCCAGCCTGAATGCCAATTCTACATGAAGACTGGAGATTGCAAGTTTGGTGCAGTTT GTCGGTTCCACCATCCGCGTGAGAGGCTGATTCCTGTTCCTGACTGTGTCTTGAGTCCAATAGGCCTTCCATTGCGTCCTGGAGAGCCGTTGTGTGTTTT CTATTCGCGTTATGGCATATGCAAATTTGGCCCAAGTTGCAAATTTGACCACCCAATGGGAATCTTCACCTATAACTTATCTGCATCACCTTCAGCTGAG GCCCCTGGTCGGGGTCTGTTAGGTTCTTCATCAGGAACAGCTGCATTAAATTTATCATCAGGACTTGCTGAGTCAGGATCATCAAAGCCCAGGAGGCTTT CAATATCAGAGACAAGACAGGTTCCTTCCGGTGATGATGACATTGATGATGAGGGATGATGTCTCTTGGAAATGGGTCATTTCGCTTTTACAATTTTTTA TGATGGGAGAAATGAGTAATGTGTAATTTATTCCCATTGCTGGAGATGTACAGAGTTCATGTCAGGTTGATTCTGTCAATCTGAGATCAAATGTGGTTGA CAGATTCAGTTATTCTGGATTTAATGTTGCCATGTTGTGTAAATTTAAGCAAATATTGTCACATCAGGTCTTTACCGAATGTGAACATTTCTTCTGTCCT TAAGCTGCTGGTCTTTCTTATTAACCTTATATTAATATGTACAAAATCTCATTTTGGAAAATCAATGATGAAAATTTTACCTCTGTAAATCTTTGTTGAG TGCAGGACCTGCAGGTTTGAAACACATTACAAAGCCTTTACTTTATCAATACGCCTGGGTTTATGCTGTCTACTGTGCATGTGTAGAATTCATTTTAAGC AGTAAGACATCAGTTTTGTCAATACCTGAATTCAGCAGAATTCAATAAGTCAACCTTGATGTATATTTTCCTCAAGTCAAAATAACAACTGCCAGAATTA TTCTGGATTTAATGTTGCACATTGTGTAAATTAAGCAAATGTTTCACATTTTGGCCTGACCCAGTGTGAATATTTCTTTTGCCCATATGCTTATGGTCTT CCCGGTGAGCATTTTCTCAATACGTAAAAAAATCTCTTTTGGAGTATCCATATTTTACCTACTCTGAATCTTTGCTGGTTGCGGGATCTGAATGTTTGAA ACACATTACAAAACCTTTCTTGGTACACTTGGGTTTATGATGTCTACTGTGCATGTTAGAGTTCTTTTTAAGCGGCAAGCCAGCAGTATCAATACCTGAA TTTAGGAGAGTTCAAATAAAGTCAACCTTGCTTTTGTAATTTGTATATCTGTATATTTTCCTCAATTCTTGACAACAGCTACTGGAAAATAATTTCAATT TGTAATGTATATCTATCCATTATTTATTTCTGTTATGTGTAGTAATTGTGCTGGATAGAGTTTGTTTTGCAGAAGTGGAAGGTTGTTTTTATTGTGACTG TTGCAGGCAGTGAAAGGAACACCTTTTTGTGATGCTTTTTCCTTGATGTCATGCCTCAACACATTTTGAACATGTTCTTGTAGCTTGCTCCGGGGTTCAG GCTGCGAATTACATGGTCCAATGAATCAAATTTGGGTAATAGCTGGATGTTTTTTCCGCTTGGAATTGGGTTTGCAGTTCAATATGATGTTACAGCATTT GTGCAGATTAAATCAATGGGGAATGTTGTACTGTTGAGTGGAGAATCTTCACTGGTTACAGCATTTGTTAATTTTAGGCCTTTGTTTCCTTCAGCAATGA AAATATGAGTTTAAGCTTGGATTTAGTATTACTATTTGCCAACTTGCACAATGTAAAATACAACCACTGTTACTTAGTATTCTAATCAGATGCTGACAAC TTAAAGTTGTGGTTAAGCTAATAGGTTAACATGATAAATGCTGCTTCTGTATGGCCATCAATCGCTTCTTAAGTCTAGTGGAGAGGAAAATGAATCAATT GTTAAC BLAST |
Tissue | pods |
Gene name | LI_gene_194753; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462725
Blastp | Zinc finger CCCH domain-containing protein ZFN-like from Pisum with 81.52% of identity |
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Blastx | Zinc finger CCCH domain-containing protein ZFN-like from Pisum with 81.52% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427979.1) |
Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |