| Id Trinity | TRINITY_DN52694_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_463528 |
| Sequence | CCTAGAACAGCTCAGGTGCTGTGGAGTTCTAGAGGCTGCTAGAATTTCAAGGGTTGGATATCCTACTCGAATGACTCATCAAGAGTTCTCTAGAAGGTAC GGCTTTCTGCTTTCTGAAGCTACCGTATCTCAGGATCCATTAAGCATCTCAGTATCTGTTCTGCAACAATTTCATATTCCTTTTGAAATGTACCAAGTTG GCTACACCAAACTGTATCTTCGAGCACAGCAGATTGGTACATTGGAGGATAAGAGAAAGCAGGTTTTGCAGGGAATACTCGGGATTCAAAAATGCTGCGG CAGTTATCAAGCTTGCAGTTCTTTCTGTGAATTTACAAACGGAGTGACAACATTACAATCATGTACTGCCAGAATCAATATCAGTTTCACTTGAAACAGA ATTATCTGCTATTTCTTGGCATTATACACGTTTTTCTTCAGTTCTATGCAAATTTGTCAAGTAAAATATTTTTCATAAAACATAATATTGATAAAAACAA AAAACAACTGTGCAGTTTTCTTCTACTTTCTAATATCCAATTAGAAGACCTTGTTGATATACATTCAGTTATGAACTTTATATGCCTAAATTGATAACTA AATTCATAACATTCTTTGGTAATTATTCATAACATTGGTTCAAGATTGTATTTTCAATTGCTATATTGGTTACATCTCAGTTGTTCGTGGAGAAATTACG AGAAGGAAATATGGTGTTACAATGAAATGTTCCGTAACAAATTCTTCCAAAAAACTCGAGGAGATGCATGCAATCATACTACTACAATCTGTAATTCGTG GGTGGCTGGTTCGAAGGGGTGGCATGAATAAGTTGAAGAGATATCCTGAAAATGCAAAACCTAGGAGGAAATCATTAGTGGAGATGCCAGAAGTAAAGCA AGATATGTCCAAAGAGCAACTTCAATCAGCTTTAGAAGAACTCCAAATTCGGGTTGGCAATGCAGAAGCGTTTGCAGATCAAAAGGAAGAGGAAAATACT GAATTGAAGGAACAACTAAAACAATCTGAGGAAAGGTGGGCTGAATATGAGGCAAAGATGAAATCAGTGGAGGAGGCGTGGCAAAAACAGATGGCATCTT TGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTTCTGAGAACGGTAATGTTCAACCTCCAATACATGGTGTTACTTTTCCTTGCTACTATGATTC TGAAGATGCTACTTCGATGGGATCTCGTACAACTGGTGTGAGCACACCTATGAAGTTTATGAGTGGTCTCTGTACCTCTGATGGAGGGAGACAGGGTAAT GGTACTTTGACTACAGTTAGCAATCTGATGAAGGAATTTGAGCAGCGGAGACATAACTTTGATGATGAAATGAAAGTTCTGAACGAGGTCAAACCCGCGC AGCAGTCTGCTAACATGAATAATCTTCAGCAACTTCTGAAACTTAAACATAGATTTGAGGGATGGAAGAAGCAATACAAGGTTAGATTACAAGAGACAAA AGCAAGGCTTCATAAATCAGAGGTGGGGAAAAGTCGGCGAACATGGTGGGAAAAAGTAAGCTCGAGGGCATAATAGCATTTAGTTTCCAAACACTCTTTG GTGAAGTATTGAAAAGGTGGAGGATTCAGCCAAAACGGTCAAATGATTGTTGTCATAAACTGTCCTTTTGAGGAGCTGCTTCTCCTATATCTCACCAGGA CACTTGATCAAGTGCTACCGTTCTTCTATCTGGTGAATGGAAATTAATTGTATATCTACCAATTTTATTACCTGGTGGGAGTGGCTGTACATAATTGTAG ACATGTAGGTGTCATAGTTGTATTTAATAATCTAGCATGCTCATGTATATTTGCTTTTCAGTGAAAAACATGTATATTCTGTTGCTGATGTGATCTAAAA CTCAGCTCCAAAGAGATATTAAATGTTGGTATCTTCAATGTAATTGGAAAAATTGTCTCCTATGTTATAACTGTTTTAGACTGTTTTGGTGTGCATATAT GACTTCGGTTCTCTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_194797; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_463528
| Blastp | Myosin-2 from Arabidopsis with 46.81% of identity |
|---|---|
| Blastx | Myosin-2 from Arabidopsis with 44.52% of identity |
| Eggnog | myosin heavy chain(COG5022) |
| Kegg | Link to kegg annotations (AT5G54280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435284.1) |
| Pfam | IQ calmodulin-binding motif (PF00612.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |