| Id Trinity | TRINITY_DN52697_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_462961 |
| Sequence | CGTATTGACCACATTTGAAGCTACTTGTCAGTTGCTGTTTCCATTTAATCAGATTCCTGCGTCACCTATGGAAACTGATGATGGGAATGCAAAACATTAT GACAAGGAAGATGCACATTATTCATGGATTAATGCTTCTTTAGCAAGTTATGGTAAATTTATGGACCGCCTAGTGACCTCATCTTTTATATTGTCTCCAT TGACAAAGCACTTGCTGGCACAACCTCTTGCAAATGGTATTATCCCGTTCCCACGAGATGCTGAGATGTTTGTGAAGGTCCTCCAATCCATGGTGCTGAA GGCCGTGCTTCCAGTTTGGAATCATCCCCAGTTCGTTGATTGTAGTTATGAATTTATTTCTACTATTATCTCTATTATTAGGCATGTTTATTCAGGGGTT GAAGTAAACAATGTAAGTGGCAGTAGTGGTGTTCATATTACGGGCCCTCCTCCCAATGAAACAACTATTTCAACCATTGTAGAGATGGGCTTTTCTAGGT CTAGAGCAGAGGAAGCTTTGAGGCAAGTTGGGTCAAATAGTGTGGAGTTGGCAATGGAGTGGTTGTTTTCCCATCCAGAGTCAGAGGAGACAGAAGAAGA TGATGAACTTGCTCGTGCACTTGCCATGTCCCTTGGAAAATCTGATTCAGACACCGAGGATGGTGTTGCTCAACAGCTTGAGGAAGAGATGGTCCAACCT CCTCCTATTGATGAGTTGTTATCAAATTGCACAAAACTTCTACAAAAGGAAACTCTCGCGTTTCCTGTTCATGACTTGCTTGTGATGATCTGTTCTCAGG ATGATGGTCAATGTAGATCTATTGTTGTCACTTATATTGTTGACCAGATCAAGGAAAGTGGGCTTGTTTCTAGTAATGGAAATTATACCGTCTTGGCTGC TCTGTTTCATGTTCTTGCTTTGATCCTTAATGATGATTCTGTAGCAAGGGATGCTGCTTCGAAGAGTGGTTTGATCAAAATTGCCTCAGATCTACTCTAC CAGTGGGATTCTTGTGTTGATAGAAAGGAGAAATTAGAGGTGCCAAAATGGGTCACAACTGCTTTTTTTGCATTAGACAGGCTGTTGCAAGTGGATCAGA AATTGAATTCTGAAGTTACAGAGCACTTGAAGAAGGAAGCTTTGAATAGCCAGCAGGCATCAATTACCATTGATGAGGATAAGCAGCACAAATGGCAGTC TGCATTGGGACTGCCTTCCAAGCATGCAGATATACATGAGCAGAAGAGACTTATTGAAGTTGCTTATAGTTGTATGAAGAACCAACTTCCCTCAGACACA ATGCATTCTATTCTGCTACTATGTTCCAATCTTACAAGGAATCATTCTGTTGCCCTTACTTTTTTTTATGCTGGTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_194837; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462961
| Blastp | E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 35.33% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 35.38% of identity |
| Eggnog | ubiquitin protein ligase(COG5021) |
| Kegg | Link to kegg annotations (AT1G70320) |
| CantataDB | Link to cantataDB annotations (CNT0001834) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414794.1) |
| Pfam | UBA/TS-N domain (PF00627.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |