Ll_transcript_480889

• Id Trinity: TRINITY_DN52700_c1_g1_i13
• Name Transcript: Ll_transcript_480889
• Sequence: GTTGAACTTCCATTTCTATATTATTATCTTTTGTACTATACCTTCTTCCTTTATAAAATAAAATCAATCAAAAATTCACGTTCACATTCATATCACTATC ATAACCAATAACAACAACACAGTTTCCACTATAATCTAATAATTTTACTTTCCCTTTTGTTTTTTTTTTCAGTTTTAAATATAGGAAGGAAGAGCTTGTG TCTGTTTACTTTATAGTCTAATTACAAGGCTTGGTGGTTGGTTGTAGTTATTGGCTATGTGGGTTGCTCTTAATTGGAACCATGGTTGTGTATGTGTTCT CTTTCTTGACTCTTTGGGAATAATTCAAGTTAATTACCTTTGATTTGTGCTGTTAATTTCTCTAATTTAGCATTAGTGCCAGTTATTTGTGTGATTAGGA GTATTTGGATTAAGATTTTGGAGTTTTAGGTTGTTAATTTGTTATTATGGAAGCTAGATTTGGAACAGAAGCATATCATTATTATGGTATAGGTGATAAC TCCACTGATTTGAGAGGTTTGGGAAAGAGATCCACAGAGTGGGATTTGAATGAGTGGAGATGGGATGGTGATCTATTTTTAGCCAGCCGGTTGAATCCGG CTGCGGCTGGTGGTGTGGGGCAGCAGTTTTTCCCTCTTGGGTCAGGGATCCCTGTTGCCACGGTTGGGAGTTCTGGTTCCCCCAACAGTTCGTCTTCTCA TTATGAGGAAGCAGATCTTGAGAATCGAAAAGGGAACAAGGAAGGGGAGAGGAAAAGGAGGGTAATTGTGTTGGAGGATGGTGGTTTGAATGAGGAAGCA GGTGCTCTTAGCTTAAAGCTTGGAGGTCACGGAGAACCTTTGGCCGATAGGGAGATTGCGAGCTGGGATGGTGTGAATGGCAAGAAGAGCAGAGTGGTTG GAGGTACTTCGAATCGAGCCGTTTGTCAGGTGGAAGATTGTGGTGCAGATCTGACCAAAGCTAAAGATTATCACCGGCGTCATAAAGTTTGTGAAGTTCA CTCCAAGGCTACTATGGCGCTTGTGGGAAATACAATGCAGAGGTTCTGTCAACAATGTAGTAGGTTTCACTTGCTTCAAGAGTTTGATGAAGGAAAGAGA AGCTGTCGAAGACGTTTGGCAGGCCATAATAAACGTAGAAGGAAAACAAATCAGGAAGCTGTTCCGAATGGAAGTACACTCAATGAGGATCAGACTAGCA GTTATCTGTTGATAAGTTTATTGAAAATACTTTCAAATATGCAAACTGAGAGGTCAGATCAAACTACAGAGCAGGATGTGCTAACTCATCTTCTAAGGAG TCTTGCTAGTCAGAATAGTGAACAAGGGGGCAAGAACTTGTCTAACCTTTTGCGGGAACCAGAGAACTTGTTGAAAGAGGGGAGTTCATCTGGGAAGTCA GAGATGGTTTCAACTTTATTCTACAATGGTTCTCAAGGCTCTCCAACTGATATAAGACAGCACCAAACAGTATCTATGAGTAAAATGCAAAAGCAAATGA TGCTTATACATGATGCTAGGGTTACTGATCATCAAACGATGTCTTCTACAAAGCCCAGCATTACGAACAGCCCTCCAGCTTACTCAGAAGCCAGGGACAG TTCTGCTGGACAGGTCAAGATGAATAATTTTGATTTGAATGATATATATATTGACTCAGATGATGGAATTGAAGATGTAGAAAGATTGCCCATCTCCACA AATCATGGGACTAGCTCTCTTGACTACCCATGGGCACAACAAGATTCTCATCAGTCAAGTCCACCTCAAACAAGTAGAAACTCAGATTCTGCATCTGCCC AGTCCCCTTCTAGTTCTAGTGGAGAAGCGCAGAGCCGCACAGATAGAATTGTTTTCAAACTCTTTGGTAAAGAGCCAAATGATTTTCCTCTTGTACTTAG AGCACAGATTCTCGACTGGCTATCCCACAGTCCTACTGATATAGAGAGCTATATACGGCCTGGTTGTATTGTTTTGACCATTTATCTCCGTCAAGATGAG GCTGTGTGGGATGAACTTTGCTACAATCTGAGTTCCAATTTGAATAGGCTGCTGAATGTCTCTGAGGATTCTTTTTGGAGAACTGGATGGGTTCACATCA GGGTGCAGCATCA
• Tissue: pods
• Gene name: LI_gene_194862;
• Additional information: details;

Expression of Ll_transcript_480889

FPKM

• PAB: 4.8
• PNAB: 9.8
• PS1: 13.2
• PS2: 5.1
• PS3: 8.1
• PW1: 8.2
• PW2: 9.8
• PW3: 7.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480889

• Blastp: Squamosa promoter-binding-like protein 12 from Arabidopsis with 52.59% of identity
• Blastx: Squamosa promoter-binding-like protein 12 from Arabidopsis with 51.78% of identity
• Eggnog: Squamosa promoter-binding-like protein(ENOG4110DQF)
• Kegg: Link to kegg annotations (AT3G60030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441263.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;