Ll_transcript_480876

• Id Trinity: TRINITY_DN52700_c1_g1_i5
• Name Transcript: Ll_transcript_480876
• Sequence: CGGACAACATTGCTCTTATTATTTCTTTACCATATATGCACAGAATATTAAAGACATGTATAATTGAAGTTCCATTTTTATATCATTATCTTTTGTACTA TACCTTCTCCCTTTAAAAAAAACTCAATCACATTCACTATAATCCTCATCATCAATAACCACAATACTATTTCTTTCCACCGAATCTGTTTCCCATTTTG CGTGGCGCACTTTCCGCCATTCATTTACCGCCGATCTAATTTTCTTCCTCCTCCACCACTCAATTCTTTGACACCCAGAAGGAAGAACTTTTTTAGTACT TGAGAGTCTAATTACAAGTTTTGTAGTACTTGGCTATGTGGGTTGCTCTTAATTGGAACCATGGTTGTGTTGGTGTGCTTTTTCTTGACTCTTTGGGAAG AATTCAAGCTAATTAACTGTGATTCGTGCTGTTAATTTATCTGATTTGGTATTGGTATCAGTTAATTGTGTGATTAGGAGTATTTGGATTAAGATTTGGA GTTCTAGGTTGTTTAATTGTTATCATGGAAGCTAGATTTGGAACAGAAGCTTATCATTTTTATGGTGTGGGCCCTTCCACTGATTTGAGTAGTTTGGGGA AGAGATCCACAGAGTGGGATTTGAATGAGTGGAGATGGGATGGTGATCTGTTTTTAGCTAGCCGGTTGAATCCGGCGGCGGGTAATGGTGTGGGTCAGCA ATTTTTCCCTCTCGGGTCCGGGATCCCCAACGCTGGGGGTTCTGGTCCCACCAACAGTTCTTCTTCGTGTTCCGAGGAAGCAGATCTTGAGAATCAAAAA GGGAACAAGGAAGGGGAGAGGAAAAGGAGGGTAATTGTGCTTCAGGATGATGGTTTGAATGAAGAAGTGGGCACCCTTAGCTTAAAGGTTGGTGGCCATG GAGAACCGTTGGCGTATAGGGAGATTGCGAGCTGGGATGATGTCAATGGGAAGAAAAGCAGAGTGGCTGGAGGAACTTCGAATCGAGCTGTTTGTCAGGT GGAGGACTGTGGTGCAGATCTGACCAAAGCTAAAGATTATCACCGGCGTCATAAAGTTTGTGAAGTTCACTCCAAGGCTACTAAGGCACTTGTGGGAAAT GCAATGCAGAGATTCTGTCAACAATGTAGTAGGTTTCACTTGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGCCGAAGACGACTGGCTGGCCATAATA AACGCAGAAGGAAAACAAATCAGGAAGCTGTTCCGAATGGAAGTACACTCAATGAGGATCAGACTAGCAGTTATCTGTTGATAAGTTTATTGAAAATACT TTCAAATATGCAAACTGAGAGGTCAGATCAAACTACAGAGCAGGATGTGCTAACTCATCTTCTAAGGAGTCTTGCTAGTCAGAATAGTGAACAAGGGGGC AAGAACTTGTCTAACCTTTTGCGGGAACCAGAGAACTTGTTGAAAGAGGGGAGTTCATCTGGGAAGTCAGAGATGGTTTCAACTTTATTCTACAATGGTT CTCAAGGCTCTCCAACTGATATAAGACAGCACCAAACAGTATCTATGAGTAAAATGCAAAAGCAAATGATGCTTATACATGATGCTAGGGTTACTGATCA TCAAACGATGTCTTCTACAAAGCCCAGCATTACGAACAGCCCTCCAGCTTACTCAGAAGCCAGGGACAGTTCTGCTGGACAGGTCAAGATGAATAATTTT GATTTGAATGATATATATATTGACTCAGATGATGGAATTGAAGATGTAGAAAGATTGCCCATCTCCACAAATCATGGGACTAGCTCTCTTGACTACCCAT GGGCACAACAAGATTCTCATCAGTCAAGTCCACCTCAAACAAGTAGAAACTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCTAGTGGAGAAGCGCA GGTATATATGTTTTGCTGTATTATTTTGAATTGGCTATTTTACTTGTGCTTTCCTCTACGGTCCTTGGACTAAGATACAGCTGAAAACTCAAAAGCCACA AGTATTGGATTAAATTTGTTACATATTGATTTTGTCATATTTAACTATTAATTTTTCGTTCCCACCATCAGAGCCGCACAGATAGAATTGTTTTCAAACT CTTTGGTAAAGAGCCAAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTCGACTGGCTATCCCACAGTCCTACTGATATAGAGAGCTATATACGGCCT GGTTGTATTGTTTTGACCATTTATCTCCGTCAAGATGAGGCTGTGTGGGATGAACTTTGCTACAATCTGAGTTCCAATTTGAATAGGCTGCTGAATGTCT CTGAGGATTCTTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCAGCATCAAATAGCCTTCATTTTCAATGGTCAAGTTGTCATAGATAAATCCCTACC TTTCAAAGGTAGCAATTATAGCAAGATTATGAGTGTCAGTCCAGTTGCTGTACCAGCATCAAAGCGAGCTCAGTTTTCTGTTAAGGGTGTCAACCTGATA GGCTCTGCCACTAGGTTAATATGTGCTTTAGAAGGGAAATATCTTCTATGTGAAGATGCTCATGAGTCAATCGATCAACACCCCAAGGAGCTTGATGAGA TCCAGTGCATCCAGTTTTCATGTTCTGTCCCTGTGATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGCTTGAGTAGCAGCTTTTTTCCTTTTAT AGTGGTTGAAGAGGATGTTTGCTCAGAAATCTGTTTGCTTGAGCCTCTATTAGAATTTAGTGAAACTGATCCAGATACTGTTGGGACTGGAAAAATTGAA GCAAAAAGTCAAGCCATGGATTTCATTCATGAAATTGGTTGGCTTCTTCACAGAAACCAAAGGAAATCTAGGATGGTTCACTTAAACTCTAGTGCAGAAC TCTTTCCATTAAAACGGTTCAAGTGGCTCATGGAGTTCTCTATGGATCATGATTGGTGTGCAGTGGTGAAAAAGCTATTGAACCTGCTTCTTGGTGGAAC TGTGACTTCAGGAGATCACCCTTCCCTGTATCTTGCACTTTCAGAGATGGCCCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGCTG TTTTTGAGATATGTTCCTGAGAATGTTTCTGATAAAGCAGGAACTGAAGACAAGGCACTAGTTGATGGAAAGAATAAGAGCTTCTTGTTTAGACCTGATG TTGCTGGTCCCGCTGGTTTAACACCTCTCCATATAGCAGCTGGCAAAGATGGTTCAGATGAAGTACTGGATGCTTTAACTAATGATCCTTGCATGGTGGG AATTGACGCGTGGAAGAATGCTCGTGACAGCACAGGCTCCACGCCTGAGGATTATGCACGCTTACGTGGCCATTATACTTACATTCATTTAGTGCAGAAG AAAATTAATAAGAGACAAGGAGCACCTCATGTGGTGGTTGAGATTCCCAGCAATGTGACAGAGAGCACTTCAAACCAGAAGCAAAATGAGTCATCCACTA CCTTTGAGATCGGAAAGGCTGAAGTAAAACGCGGCCAAGGTATCTGCAAAGCTTGTGATACTAAATTGTCGTGTAGAACTGCAGTAGGCAGGTCTTTGGT TTACAGACCTGCAATGCTCTCAATGGTGGCCATAGCAGCCGTCTGTGTCTGCGTGGCCCTTCTATTTAAGAGCTCGCCGGTAGTTTTATATGTATTCCAA CCCTTCAGGTGGGAGTCATTGGAATTCGGTACATGCTAAGGTTCATTAACTTGAAACTTAAATAAGACTTGATAGGTAATAATATAAGGATGCATTTGTA TACTTAATGACTGAGATTTCCTGTAGGATTAGTTCTTTGTATTGGCTAAATTGTGTAATATTATTTACATATTTATTATCCTTCAATGGACTTCCTTGTA TTATGTATTGGATATTGACTCTTCTGAAACTGTATTTTTGTAGAATCCTATATATTTCAGTGTAATAATTGTATGGGAATATTAAATATTGTCTTTATAT TTCAATCTGCATTGTACATGTTTCATTAGTATACGCCTGATGGATTCTGGATTCTGGATTCTCACCCAAAGTATTTTAGTATTATATTGACATGTATTTT TATCACTGATTCTAAGGAATGTAAAGG
• Tissue: pods
• Gene name: LI_gene_194862;
• Additional information: details;

Expression of Ll_transcript_480876

FPKM

• PAB: 0.8
• PNAB: 0.1
• PS1: 0.8
• PS2: 0.6
• PS3: 0.2
• PW1: 0.1
• PW2: 0.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480876

• Blastp: Squamosa promoter-binding-like protein 12 from Arabidopsis with 45.47% of identity
• Blastx: Squamosa promoter-binding-like protein 1 from Arabidopsis with 58.11% of identity
• Eggnog: Squamosa promoter-binding-like protein(ENOG4110DQF)
• Kegg: Link to kegg annotations (AT3G60030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427869.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;