| Id Trinity | TRINITY_DN52704_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_479132 |
| Sequence | CAGGACAGTGTACTTTTCTCACTGTCTATGTTCTGTCTCTCACCGTGTCTTTCTCAATTTGTAAGGTTACACAGTTGGAGACACTGTTACTTCATTTTTA TAAAAATATTCACTTTTCACTTTATTTATTTATATTCATTCACAAACTGTTGAAGCCACATCATATATGATCATAACTTCACAAACTGGGTTCGGAAGAA GAAGAAAAAACCACTCTTTTCCGCATAAAAAAGAGGTAAACTTCATTTCTGCACCACCCTTTTGTGAGATAGGTGCTCTTCTACTTCAAGTTGCAAACTT TACTCGACACCTTTTGTTGGGTTAACCGGTTCTTCAGAAAAAAGGGCCAGAAATCAGTGGGACTGTGGGGATATTATAATTTATAATCGATTTTAGTTCT GGAAATAACCATTGAGGGCAAGCCGATCATCTCTGTCAACAATGTCGGATGCATATGAAGACCAAGAGCCTCCTGTACAGCCAACTGTAAGATTTGCCCG AAGAACATCCTCGGGTCGCTATGTAAGTTACTCAAGGGATGATCTTGATAGCGAGCTCGAGAGTGGTGATTTCATGAATTACACGGTGCATATACCACCA ACCCCTGATAACCAACCTATGGATCCATCAATTTCACAGAAAGTTGAGGAGATATATGTGTCCAATTCACTCTTCACAGGTGGGTTCAACAGTGTTACTC GAGCACATCTCATGGATAAGATAATAGAATCTGAAGCAAACCATCCACAGATAGCTGGTGCAAAAGGATCTTCGTGTGCTGTTCTTGGATGTGATTCTAA GGTGATGAGTGATGAACGTGGTGTGGATATTCTTCCATGTGAGTGTGATTTTAAGATATGTAGAGATTGTTATCTAGATGCAGTAAAAATGGGAGGTGGG TTATGCCTGGGATGCAAGGAGCCATATAAGAACGCCGAACTAGATGGAGCGGATGTGGATGATGATCAACCCCTTTCACTTCTTCGGACAAGTGGACTAT CTAAAATGGAGAGGAGAATGTCTAAGATGAAGTCAACTAATAAATCGGCATTGATGAGGAGCCAAACGGTAGAATTTGATCATAATAGGAACCTTTTTGA AACAAAGGGTACCTATGGCTACGGCAATGCTTTATGGCCAAAGGAAGGAGGTTTTGGAAATGGAAAAGAGGGAGAAGTTGCTGAGCCAAATGAGTTTATG GACAAGCCATGGAGGCCCCTTACACGGAAGCTGAAGATACCTGCAGCTATTCTGAGCCCATATCGGCTTGTTATTTTTATCCGTTTGATTGTACTGGGAC TGTTCCTGGCGTGGAGGGTTATGCACAAAAATACTGATGCATTATGGCTATGGGGAATGTCTGTGGTTTGTGAGATCTGGTTTGCTTTTTCGTGGATTCT GGATCAACTTCCCAAACTATGCCCAGTGAATCGTGCTACCGATCTTAATATTCTGAAGGAGAAATTTGAAACACCGACTCTCAGCAATCCTACTGGAAAG TCTGATCTTCCAGGCATAGATATCTTTGTCTCCACAGCTGATCCTGACAAAGAACCACCTCTTGTCACCGCCAACACTATCTTGTCTATTTTAGCTGCTG ATTACCCAGTTGAGAAGCTGTCCTGCTATGTTTCTGATGACGGAGGCGCGCTTCTAACTTTTGAGGCAATGGCTGAAGCTGCTAGCTTTGCTAATGAGTG GGTTCCCTTCTGCCGTAAACATGATATAGAGCCGAGGAATCCTGAATCATATTTCAACTTAAAGAGAGACCCTTATAAAAACAAAGTGAAGCCTGATTTT GTCAAAGATCGTAGACGGTTGAAGCGTGAGTATGACGAGTTCAAGGTCAGGATTAATGGTCTGCCCGATTCTATCCGTCGCCGATCAGATGCCTATCATG CAAGAGAGGAAATCAAGGCCATGAAACTTCAGAGACAAACCAGGGGAGATGAACCTATAGAAACTGTAAAGATTCCCAAAGCAACATGGATGGTTGATGG AACTCATTGGCCAGGGACTTGGTTAAGTCCTACATCTGAGCACTCTAAGGGTGACCACGCTGGTATAATTCAGGTGATGTTGAAACCTCCCAGCGATGAA CCTCTTCTCGGAGGTGCTGATGATGCAAAGCTTATCGACCTGGCAGATATTGATATCCGTCTTCCCCTTCTTGTTTATGTTTCTCGAGAGAAGCGTCCAG GCTATGATCATAACAAAAAAGCGGGGGCCATGAATGCCTTGGTTCGTGCCTCTGCTATAATGTCAAATGGTCCTTTTATACTCAATCTTGATTGTGATCA CTATATCTACAACTCGAAGGCAATGAGGGAAGGCATGTGCTTTATGATGGATCGTGGAGGTGACCGCCTATGTTATGTCCAGTTCCCACAGAGGTTTGAG GGGATTGATCCCTCTGATAGATATGCAAATCATAACACTGTCTTCTTTGATGTCAACATGCGTGCCCTTGCTGGACTTCCAGGGCCAGTCTATGTGGGAA CCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_194891; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479132
| Blastp | Cellulose synthase-like protein D2 from Arabidopsis with 79.48% of identity |
|---|---|
| Blastx | Cellulose synthase-like protein D2 from Arabidopsis with 79% of identity |
| Eggnog | Glycosyl transferase, family 2(COG1215) |
| Kegg | Link to kegg annotations (AT5G16910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422405.1) |
| Pfam | RING/Ubox like zinc-binding domain (PF14570.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |