| Id Trinity | TRINITY_DN52710_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_479065 |
| Sequence | TGGCATTGTGGCTGTACAACTTTTCTACCAACAATCCACAACTCTTAACTATATGAATATTGAAAAATAAGCCAAGAAAGCATGGAAGAAATGACAATGG CAATAGATAACTGTAGCCAGCAGAAGCAGCTTTCTCATCATGCTCTTCCATTTGCAAGAAGCTATCAGGTTGAAGCATTGGAGAAAGCTATGAAGGAAAA CACCATTGTGTTCTTAGAGACTGGTGCAGGCAAGACTTTGATAGCCATAATGCTTCTCCGAAGCTATGCTTATCTTCTGCGAAAGCCTTCGCCTTACATT GCAGTTTTCTTGGTTCCGAAAGTTGTGTTGGTATCTCAACAAGCTGAAGCGGTGAAAGTGCTCACTGATTTAAAAGTGGGAATGTATTGGGGAGAAATGG GAGTTGATTACTGGGATGCTTCCACCTGGAACAAAGAATTTGAGAAACATGAGGTTCTGGTTATGACCCCCGCAATATTGCTTAGGAGCTTGAGGCATAG CTTTCTCAAACTTAACATGATAAAGGTTCTAATAATGGACGAATGCCATCATGCTAGGGGTAGAGACCCTTATGCTTGTATCATGAGAGAGTTTTATCAT GACCAATTAAAATCTGGTGTCTCTGATCTACCTCGGATATTCGGGATGACTGCATCTCCAATTAAGACAAATGTTGGGAATTCTGAATGGACCTTGGCAG AAAGTATTCACAAACTAATGACTCTAATGCATTCAAAGGTATATACTTGTGCAAGTGAAGCTATAACAGAGTTCATTCCAATATCAACCCCAAAATTCAA GTTTTACAGGGAAGATGAAATTTCATATGTGCTATTTCAAGACTTAGCTGTTAAGATCAAGATGTTAAAACAGCAGGTGTGTAAAGTTAAGGAGTTGTGC AATAATTCCCCAGGTGTTAAGAGTAGTAATAAGTAATAACTCTCTAAATCAATGCCAGATTGTCAACACTGTCATGTTATTATCTTTATTAGTCAATCAT TTCTACTTTACAAGTTAAGCATTTTTTTTATCAGATATAGTTGATTATTTCCTTGAGGTTATTGACCATGGATATTCTGTTCCCTCAGCATGAACTCATC CTCAGAAATTCAGATTTCACAGAATCAGCTGCAGAGTCTGCACACAAACGAATCGAAAAGAGTTTTTATGCTATAATGTTTTGCTTGGATGAGCTTGGTG TTTGGTTGGCTTTAAGGGTTCTTATTTGCCCTTCTCCTGCTGCAGTTTTATTGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_194941; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479065
| Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 67.87% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 67.87% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT3G03300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440116.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |