Ll_transcript_479077

• Id Trinity: TRINITY_DN52710_c1_g2_i10
• Name Transcript: Ll_transcript_479077
• Sequence: TGTAGTTATCTGTCTATCTCGTTACATTTGTTATTCAATACACTTTTCCGAATCTGACATGTATACTATATTTGCAGGGATTTGAATAATATGAGATGTA TAGTTTTTGTTGAAAGGATCATTACAGCAGTTGTTCTTGAGACACTTTTGAATGCCTTGCTTCCGAAATACAATAGTTGGAAGACTAAGTTCATAGCTGG ACACAATTCTTGGTTGAAAAATCAAACAAGGAAGACACAAAATGAAATCGTGGAAGAATTTCGTGATGGATTGGTCAACATCATTGTTGCAACATCGATT CTTGAAGAGGGTTTAGATGTCCAGAGTTGCAATTTGGTTATTAGATTTGACCCATGTCCCACAGTATGCAGTTTCATACAGTCCCGAGGTCGTGCCAGAA TGCAAAATTCAGATTACTTATTAATGGTTAAGAGTGGGGATTCAGTGACACATTCAAGACTCGAGAATTACCTTGCATGCGGAGATATCATGAGGAAGGA GTCCTTGCGTCAGTCTTCAATTCCTTGTGGTTTTTTTGAACAACTTCCGGAGGAAGTTTATCGCGTTGAAAGCACTGGAGCCATTGTTAATCTTAGTTCT AGCATTACATTGATATACTTGTATTGCTCATGGCTCCCTTCAGATGGGTACTTTAAACCATCTCCAAGATGGGACAAAGAGAC
• Tissue: pods
• Gene name: LI_gene_194941;
• Additional information: details;

Expression of Ll_transcript_479077

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.6
• PS2: 0.2
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479077

• Blastp: Endoribonuclease Dicer homolog 2 from Arabidopsis with 69.39% of identity
• Blastx: Endoribonuclease Dicer homolog 2 from Arabidopsis with 69.35% of identity
• Eggnog: Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571)
• Kegg: Link to kegg annotations (AT3G03300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426302.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;