| Id Trinity | TRINITY_DN52710_c1_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_479072 |
| Sequence | GCTGCAGTTTTATTGTTTTGGTGTTTGTTCATTTTTCATGATTGGTTAATTTAGTTCGAACATTTTTTTCTTCACAGGCTGCAGAGTCTTTATTTTCCAA TGAAACCGAATTATTTTCACGTGACAACTCTGGGGATGGACTTGTTAAAAGTTTCAGTCTTGCTACTGTGAATCATCTTACAACTTACTTACCGTCTGGT TCTCAGTGGTCTATTGGTGATAATATTAAATCTGACGTGGATATGGGGCTGTTAACCTCCAAAGTTTTCTGTCTTGTCGAATCTCTGCTTGAGTACAGGG ATTTGAATAATATGAGATGTATCGTTTTTGTTGAAAGGGTCATAACAGCAGTTGTTCTTGAGACTCTTTTGAATGTCTTGCTTCCAAAATACAATAGCTG GAAGACTAAATTTATAGCAGGACACAATTCTGGATTGAAAAATCAAACTAGGAATAAGCAAAATGAAATTGTAGAAGAGTTTCGTGATGGATTGGTCAAC ATTATTGTTGCAACATCGATTCTTGAAGAGGGTTTAGATGTCCAAAGTTGCAATTTGGTTATTAGATTTGACCCGTGTCCCACAGTATGCAGTTTCATAC AGTCCCGAGGTCGTGCCAGAATGCAAAATTCAGATTACGTATTAATGGTTAAGAGTGGGGATTCAGTTACGCATTCAAGACTAGAGAAATACCTTGCGAG TGGGGATATCATGAGGAAGGAGTCCCTGCGTCAATCTTCAATTCCTTGTGGTTCACTTGAACAACTTCCGGAGGAAGTTTATCGTGTTGAAAGCACTGGA GCCATTGTTAATCTTAGTTCTAGCATTACTTTGATATACTTGTATTGCTCATGGCTCCCTTCAGACGGGTACTTTAAACCGTCTCCAAGATGGGACAAAG AGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_194941; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479072
| Blastp | Endoribonuclease Dicer homolog 2 from Arabidopsis with 69.72% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 2 from Arabidopsis with 59.22% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT3G03300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440116.1) |
| Pfam | Helicase conserved C-terminal domain (PF00271.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |