Ll_transcript_479075

• Id Trinity: TRINITY_DN52710_c1_g2_i8
• Name Transcript: Ll_transcript_479075
• Sequence: TAACCTTTCATCTCCCCCATGATAAAAAGTATGATTTTTAAGTGTTTTGCATTTATGGGTTTTTTATATTGTGTAGTTACATGAAAAGAATCAGAGAAAC CATGGATGAAGTGACAATTGAAACAAATACCTGTGATCAGTTGCAGAAGCAGGAACTTTCTCCTCACGCTCTTCCATTTGCTAGAAGCTATCAACTTGAA GCATTGGAAAAAGCTATAAAGGAAAACACCATAGTTTTTTTGGAGACTGGTTCAGGAAAGACTTTGATAGCCATCATGCTTCTTCGCAGTTACGCGTATC TACTGCGAAAGCCTTCTCCTTACATTGCTGTGTTTTTGGTTCCCAAAGTTGTGCTGGTATCTCAACAAGCTGAATCTGTGAAAGCTCTCACCGATTTAAA AGTCGGAATGTATTGGGGTGAAATGGGAGTTGATTACTGGGATGCTGGTACCTGGAAAAAAGAAATCGAGAAATATGAGGTTCTGGTTATGACTCCGGCA ATATTGCTTAGGAGCTTGAGGCATAGCTTTCTCAAATTGAACATGATAAAGGTTCTAATAATGGACGAATGCCATCATGCTAGGGGAAGAGATCCTTACG CTTGCATCATGAGGGAGTTTTATCATGACCAACTACAATCTGGTACCTCTGATCTACCTCGGATTTTCGGGATGACTGCGTCTCCAATTAAGTCAAAAGT TGGAAATTCTGAATGGACCTTGGCAGAAAATATTCGCAAACTAATGACTCTAATGAATTCAAAGGTATATACTTGTTCAAGTGACGCTATTGCAGAGTTC ATTCCACTATCAACCCCAAAATTCAAGTTTTACAGGGAAGATGTAATTCCACCTATGGTAGTTGAAGAGTTAGCTGGTAAGCTCAAGATGTTGAAAGAAC AGCATGAAGAAGCCCTCGTAAATTCAGATTTCACACAATCCGCTATAGATTCTGCACAGAAGAGAATGGAAAAGATTTTGTTCGCTTTAATGTTTTGCTT GGATGAGCTTGGTATTTGGTTGGCTTTGAAGGCTGCAGAGTCCTTATCTTCCAATGAATCTGAATCAATTTCACGTAGTAACTCCGGGGATAGATTTGTT AAAAGTTTCAGTCTCGCTACCGTTCATCATCTTACAACTTACTTACCGTCTGGTCCCGAGTGGTCTTTTGGTGATAATATTAAATCTGATATGGATATAG GGCTGTTAACCTCCAAAGTTTACTGCCTTGTCGAATCTCTGCTCGAGTACAGGGATTTGAATAATATGAGATGTATAGTTTTTGTTGAGAGGGTCATTAG TGCAGTTGTTCTTGAGATTCTTTTGAATGCCTTGCTTCCAAAATATAATAGCTGGAAGGCTAAATTCATAGCAGGACACAATTCTGGATTGAAAAATCAA ACAAGGAAAAAGCAAAATCAAATTGTCGAAGAATTTCGTGATGGACTGGTCAACATCATTGTCGCGACGTCGATTCTTGAAGAGGGTTTAGATGTCCAAA GTTGCAATTTGGTTATTCGATTTGACCCATGTCCCACAGTATGCAGTTTCATACAGTCCCGTGGTCGTGCTAGAATGCATAATTCAGATTACTTATTAAT GGTTAAGAGCGGGGATTCGGATACACATTCAAGACTAGAGAAATACCTTGCAAGTGTGGATGTTATGAGGAAGGAGTCGATGCGTCAGTCTGCGATTCCT TGTGACTCTTTTGAACAGCTCCCGGAGGAAGTGTATCGTGTTGAAAGCACTGGAGCCATTGTTAATCTTAGCTCTAGCATTACTTTGATATACTTGTATT GCTCATGGCTCCCTTCAGACGGGTACTTTAAACCGTCTCCAAGATGGGACAAAGAGACCGGAACACTGTATCTTCCCAAGAGCTGCCCTCTACAGCCTAT TCAGGTACAAGGTGTCAAAAAGTTCTTAAAGAATATTGCATGTCTCGAAGCATGCAAGCAACTTCATAATATCGGAGCTTTGACTGATAATCTGGTTCCT GATATTGTCGTGGAAGAAGCAGAGGTGGATGAATTTGAGAATGAGCCTTACAATGAGGAGCAACCATGTTATGTACCGACTCAATTGATCAACCACCTCT CGAAGGATGATAAGACAATGTATCACTGTTATTTAATTGAATTGAAGCAAAATTTTAGCTATGACATCTCTGTGCGTGACATTGTGCTTGCAACAAGAAG TGAGCTTGATCCAGAAACTGAAAGCACGCAATTTGAAATGTGCTTTGACCGGGGTAGTCTGTCGATAAACTTAAGACGCATCGGAGCTGTTCATCTTTCC CCAAATGAGGTTCTTTTGTGTAAAACATTCCAAGTCACTATTCTCAAGATTCTTGTAGATCACAATATTGATAAGTTGGCAGCTAGTTTAAAATCTTTTG ATAAACTCTATTTGGACGATGATCTGGAGATCGATTATCTTCTGCTACCGGCCACTGCCATACAACATAGACCTGCCGTAATTGATTGGGTGTCCATTAC CTCTGTCAATCCATCTAAAATTATATGCGATAAGCATTCTCCAAAAGTATGGACGAAAAATGGTCTAGTTTGCCCTTGCATACTACAAAACTCTTTGGTT TATACTCCTCATAATGGTCGAATTTATATCACCACTAGTATAATGGAATTGGATGGGAACTCACCTCTGGAACTAAGGGATGGTGGAGTTACGACGTACA AGAAATACTATGAAGAAAAGCATGGCACTCAATTGTGTTTTGAACATCAAGAACTGCTTAAAGCAAGACACATTTTTCTCGTAAAAAATTACTCTCATGG ACGCAGACAAGAGAAGGATAGAGCAGGCAAGAACTATGTTGAACTACCC
• Tissue: pods
• Gene name: LI_gene_194941;
• Additional information: details;

Expression of Ll_transcript_479075

FPKM

• PAB: 0
• PNAB: 0
• PS1: 1.1
• PS2: 0
• PS3: 0
• PW1: 0.7
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479075

• Blastp: Endoribonuclease Dicer homolog 2 from Arabidopsis with 53.46% of identity
• Blastx: Endoribonuclease Dicer homolog 2 from Arabidopsis with 53.46% of identity
• Eggnog: Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571)
• Kegg: Link to kegg annotations (AT3G03300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419124.1)
• Pfam: Type III restriction enzyme, res subunit (PF04851.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;