Ll_transcript_481560

• Id Trinity: TRINITY_DN52712_c3_g1_i15
• Name Transcript: Ll_transcript_481560
• Sequence: ATGGGCATGTTGCAAACCTATATAAGATACATATTGTAGTCATTTGTGACACAAGAAGAATATATTTATTTACATCTACATTTAGATTTTCATTTTCTCA TATAATTTAATCTACACACTCGATATTTAGATTTTCTTTTCATCTATACCTCTTTCAAACGCATATTATATAGTGTATCTTAGTTGCCTCCACCAACTGC CATGGCGGCCATCGGAGCATCTCTAAGTCCCGCCGCTTCTTTTCCCGTTTACAGCTGCCAAGAACCGTCGCAGACAGTTCTGAAATTAAAGGCAAAAGGG ATTCCTATCATGCCTGCACGTTTCGCATTTTCCGTTGACCGAGTTCCGGAGACAAGTATGACGGCGATACTGCCGAATAACGGAATTCCATCGGTGAAGG TGAACGGAGAAGAAGGTACGTTGGCAGAGAAAGTGAAGCGTAGTGAGAATAAGAAAGATGAAGAGGAAGAGGAGCTGAATCGGAGAAGCGGTTGGAGGAG TTACGTGGAACAGTCGAAGGAGATTGCTAAACCGGACGGTGGACCGCCGCGGTGGTTTTCGCCGTTGGAGAGCGGTTCGCGGTTGGATAAATCTCCTCTG CTGCTGTTTTTGCCGGGGATTGATGGTGTGGGACTTGGACTTACTTTGCATCATCAGAAATTGGGAAGTATTTTTGATGTCTGGTGCTTGCATATTCCAG TTGCGGACCGAACACCATTCACAGAATTTGTGAAAATAGTTGAGAAAACAGTTAGATCAGAACATCAACGGTTACCAAATAGACCCATATATCTTGTTGG AGAATCTCTAGGAGGATGCCTCGCGATGGCCGTTGCAGCCCATATCCCTGACATTGATGTTGTACTAATTTTGGCAAACCCAGCTACTTCATTTGGCAGA TCACAGTTGCAACTTCTAACACCATTAATGGAAGCTATGCATGGTCCACTCTCTCTTTTCCCACCAGAAATTCTCAGTTCGATATCAGGTGACCCTTTGA AGCTGTTGGATAATTTGGTGAGAGGATTTCCTTTGCAAAATACAGCTAAAGAGCTATTGGAGGACTTCATTACTTTCTCAGGATCTCTCCCTGTTCTTGC TAATATATTGCCAATAGAAACACTTCAGTGGAAACTAAAGCTGCTTAAGTCGGGTTCTGCTTATGTCAATTCACGCCTTCATGCTATCAAAGCTCAAACT TTGATACTTTGCAGGTTCATGCTATTTGACTTGTCCATCTTGTATCATTCAAAATATGGAACATACTTTGTTAACATTGGCTTTCAGTACTCATAGCAGA AACACTATTATCATCATGATAGAAACAACTAGATCAACTAGTTTTTCTGAATCTGTTGGAATCTGTTAACTGAGCAATCTAATGGCATGTTAGTTAGTTA AGATAAATTGCCATGATTAACTTGGGAAAAAAATAGAAGCTTAAATGGTAGAAGTAATTGACTATCTGATCTCAATATGATTTTTCCTATCTGAAAGCAA GTCTAGATTATGATGACCCGAGTAGTCCTAACTGCAATTCCTTTTTTAGTTTCTAATTCGTGCATTAGCTTAAATTGGACAATGAATCCCATTATAGATA GTAAAATAACCCCATTTAATATCAGATGTAGACAACATATTTTTTGTTTCTAGCATATGGCTCTTTTTAAAGGTGAAACTGAGTTTTAGCATTTGTCCTT TTAGTGGAAATGATCGGTTACTACCTAGTCAACAGGAAGGTGAAAGACTATGTCAGTTACTTCCAAGATGCGAGCTTGGTAAATTTGAAGGCAGCGGACA TTTCCTATTTTTGGTATAAGTTCTCTGTTTCTATTTTTCTGCTTCATGCATGCAACATGATCTTACATTCCTACGCATTTGATAGTTGAGCGAAATACCA AATATCAGTGTCAAGTCTTAACAGACCTTAATGCGGTACATTTGTTCATTGCACAGGAAGGTAGCATTGACCTGGTAACAGTCATCAAGCGTGTTTCTTT CTATCGCCGTGGCAAGTATCATGACTATGT
• Tissue: pods
• Gene name: LI_gene_194950;
• Additional information: details;

Expression of Ll_transcript_481560

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.3
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_481560

• Blastp: Acyltransferase-like protein At3g26840, chloroplastic from Arabidopsis with 45.83% of identity
• Blastx: Acyltransferase-like protein At3g26840, chloroplastic from Arabidopsis with 45.83% of identity
• Eggnog: Acyltransferase(COG0204)
• Kegg: Link to kegg annotations (AT3G26840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437418.1)
• Pfam: Serine aminopeptidase, S33 (PF12146.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;