| Id Trinity | TRINITY_DN52719_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_481609 |
| Sequence | GGTTGTGAAGGTGGAGCAGCATGTCCTGATCTTAGTATCTGATACAACAAAGGAACATATCCGTGTGTTTGCTGATGATGTTGTGGAGAGTTCTGAAGTG ACCACTGGAGTTACTAAAATTGGAGACTACGAACTTCGTGATCTTGTACTGCTAGATAATTTGAGCTTTGGTGTGATAATACGTGTAGAAAGTGAGGCAT TTCAGGTTCTTAAGGGTGTTCCTGACCGAGCTGAAGTGGTGCTTGTTAAATTGAGAGAGATCAAATGTAAGTTAGATAAGAAAATCAGCGTGCAAGACAG ATTCAAAAACACAGTATCAGCAAAGGATGCTGTGCGGATTGTTGAGGGTCCCTGCAAAGGCAAACAAGGTCCGGTGGAGCACATATATAGAGGAATCTTG TTCATCTGTGATCGCCATCATCTTGAACATGCAGGCTTTATATGTGTTAAGGCTCAATCATGTGTGGTTGTAGGAGGTTCACGTTCCAATGGGGACATAA ATGGTAATGCCTACTCTAGATTTGGCAGCCTCAGAACCCCCTCTCGTATTCCACAGTCTCCCAGTAGGTTTTCTAGGGGAGGGCCTCCAATTCATTCTGG AGGAAGAGGCCGAGGTGGAAGGGGGCACGATGGTCTGACAGGTTCAACAGTTAAAGTACGCCAGGGTCCCTACAAAGGTTATCGTGGGCGTGTTATTGAA GTTAAAGGCACATCAGTTCGTGTTGAATTGGAGTCCCAAATGAAGGTTGTGACAGTTGACCGCAACCATATATCTGACAATGTGGCTGTAACTCCATATC GTGAATCTCGATACGGGATGGGAAGTGAAACCCCAATGCATCCTTCTCGAACTCCCTTACATCCATATATGACTCCTATGAGAGATCCTGGAGCGACCCC TATTCACGATGGAATGAGAACACCTATGCGTGACCGGGCATGGAATCCTTATACACCAATGAGTCCTCCAAGGGATAACTGGGAAGATGGAAATCCAGGC TCTTGGGGAGCAAGTCCACAGTACCAACCAGGAAGCCCTGCTTCACGGCCATATGATGCTCCAACTCCTGGTGCTGGTTGGGCCAGCACTCCTGGTGGCA ATTATAATGAAGCTGGGACTCCCCGGGACAGTTCTGCCTTTGCCAATGCTCCAAGTCCATATTTACCATCAACACCTGGTGGGCAGCCTCTGACACCAAG TTCAGTGTCTTATCTGCCTGGCACCCCTGGAGGACAACCTATGACTCCAGGAACTGGTGGTCTGGACATGATGTCCCCAGTTTTAGGTGGAAACAGCGAA GGGCCTTGGTTTTTGCCAGACATATTAGTTAATGTACACAAGCCCGGAGAGGAATCAGTTGGGGTTATAAGAGAGGTTCTTACGGATGGCTCATGCAGGG TAGCTCTCGGATCTAGCGGGAACGGTGAAACAATAACTGCCCTTCCTAGTGAAATGGAGGCTGTGGTACCAAGGAAATCAGATAAAATAAAAATAATGGG TGGCTCATTGTGTGGTTCCACAGGCAAGTTGATTGGTGTGGATGGTACTGATGGTATTGTAAAGGTAGATGACACTTTGGATGTGAAGATTTTAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_195004; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_481609
| Blastp | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 74.95% of identity |
|---|---|
| Blastx | Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 72.73% of identity |
| Eggnog | Transcription elongation factor(COG5164) |
| Kegg | Link to kegg annotations (AT4G08350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415219.1) |
| Pfam | KOW motif (PF00467.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |