Ll_transcript_481616

• Id Trinity: TRINITY_DN52719_c1_g1_i6
• Name Transcript: Ll_transcript_481616
• Sequence: GTGAACGAAAAGGAACTGTGTAAATATTTTGAACCTGGAAACCATGTTAAGGTTGTTTCTGGTGCTCAAGCGGGTGCCACTGGCATGGTGGTCAAGGTGG AGCAGCATGTCCTGATTTTAATATCTGACACAACAAAGGAACATATCCGTGTGTTTGCTGATGATGTCGTGGAAAGTTCTGAAGTGACCACTGGAGTTAC AAGCATTGGGGACTATGAACTTCGTGATCTTGTATTGCTAGATAATTTGAGCTTTGGTGTGATAATACGTGTAGAAAGTGAAGCATTTCAGGTTCTTAAG GGTGTTCCTGACCGAGCTGAAGTTGTGCTTGTTAAATTAAGAGAGGTCAAATCTAAATTAGATAAGAAGATAAGCGTGCAAGACAGATTCAAAAATACAG TTTCAGCGAAGGATGTTGTACGAATTGTTGAGGGTCCCTGCAAAGGCAAACAAGGTCCTGTGGAGCACATATATAGAGGAATCTTGTTCATCTGTGATCG CCATCATCTTGAACATGCAGGCTTTATATGTGTTAAGGCTCAATCATGTGTGGTTGTAGGAGGTTCACGTTCCAATGGGGACATAAATGGTAATGCCTAC TCTAGATTTGGCAGCCTCAGAACCCCCTCTCGTATTCCACAGTCTCCCAGTAGGTTTTCTAGGGGAGGGCCTCCAATTCATTCTGGAGGAAGAGGCCGAG GTGGAAGGGGGCACGATGGTCTGACAGGTTCAACAGTTAAAGTACGCCAGGGTCCCTACAAAGGTTATCGTGGGCGTGTTATTGAAGTTAAAGGCACATC AGTTCGTGTTGAATTGGAGTCCCAAATGAAGGTTGTGACAGTTGACCGCAACCATATATCTGACAATGTGGCTGTAACTCCATATCGTGAATCTCGATAC GGGATGGGAAGTGAAACCCCAATGCATCCTTCTCGAACTCCCTTACATCCATATATGACTCCTATGAGAGATCCTGGAGCGACCCCTATTCACGATGGAA TGAGAACACCTATGCGTGACCGGGCATGGAATCCTTATACACCAATGAGTCCTCCAAGGGATAACTGGGAAGATGGAAATCCAGGCTCTTGGGGAGCAAG TCCACAGTACCAACCAGGAAGCCCTGCTTCACGGCCATATGATGCTCCAACTCCTGGTGCTGGTTGGGCCAGCACTCCTGGTGGCAATTATAGCGAGGCT GGGACTCCCCGGGACACTTCTGCCTATGCCAATGCTCCAAGTCCATATTTACCATCAACACCTGGCGGGCAGCCTATGACACCAAATTCAGCGTCTTATC TTCCTGGAACCCCTGGAGGACAGCCTATGACTCCAGGAACTGGTGGTCTGGACATGATGTCCCCAGTTTTAGCTGGGGACAACGATGGGCCTTGGTTTAT ACCAGACATATTAGTCAATGTACACAAGTCTGGAGAGGAATCAGTTGGAGTTATACGAGAGCTTCTTCCGGATGGCTCTTGCAAGGTAGCTCTTGGATCT AGCGGAAATGGTGAAACAATAACAGCCCTTCCTAGTGAAATGGAAGCTGTAGTGCCAAGGAAATCAGACAAAATAAAAATCATGGGTGGTGCATTGCGTG GTGCCACAGGCAAGTTGATTGGTGTTGATGGCACCGATGGTATTGTAAAGGTAGACGATACTTTGGATGTGAAGATTTTAGACTTAGTTATTTTGGCAAA ATTAGCTCAAGCTTGATAATATTGTTGTAGACAATGTATATCTTTTACTTATGTATGAAATGAAGATTAGTCCACTTTCTAGAGGAATATGGGGGTGAAG AAAAATAATAGGTGAAATTATTACAAAAGTTTTAGAGATTAATGCTTTATCAATAAACATGATCTATGATAGAATATTATAACGTCGTTCGATCTTTGTA TCTGAACCCACTAAGTGGGATAAAAAATTTGTTGTATATTTTACCTCCTCTTTTATGAGCTATTTTCCCTGTCTTATTTTGCC
• Tissue: pods
• Gene name: LI_gene_195004;
• Additional information: details;

Expression of Ll_transcript_481616

FPKM

• PAB: 4.7
• PNAB: 4.9
• PS1: 9.9
• PS2: 9.5
• PS3: 13.4
• PW1: 9.3
• PW2: 8
• PW3: 9.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_481616

• Blastp: Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 75.09% of identity
• Blastx: Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 73.01% of identity
• Eggnog: Transcription elongation factor(COG5164)
• Kegg: Link to kegg annotations (AT4G08350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416440.1)
• Pfam: KOW motif (PF00467.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;