Ll_transcript_481618

• Id Trinity: TRINITY_DN52719_c1_g1_i7
• Name Transcript: Ll_transcript_481618
• Sequence: TGGAGCAGCATGTCCTGATCTTAATATCTGACACAACAAAGGAACATATCCGTGTGTTTGCCGATGATGTTGTGGAGAGTTCTGAAGTGACCACTGGAGT TACAAGAATTGGGGACTATGAACTTCGCGATCTTGTACTACTCGATAATATGAGCTTTGGTGTGATAATACGTGTAGAAAGTGAGGCATTTCAGGTTCTT AAAGGTGTCCCTGACCGAGCTGAAGTTGTGCTTGTTAAATTAAGAGAGATCAAATGTAAGTTAGATAAGAAAATCAGCGTGCAAGACAGATTCAAAAACA CAGTATCAGCAAAAGATGTTGTGCGGATTATTGAGGGTCCCTGCAAAGTGAGATTCTGACTTCTGGTTAGATATATTTCTCGGTAGTTAATATTATTAAA TTATCACCTTTTTTCTAGGGCAAACAAGGTCCGGTGGAGCACATATATAGAGGAATCTTGTTCATCTGTGATCGCCATCATCTTGAACATGCAGGCTTTA TATGTGTTAAGGCTCAATCATGTGTGGTTGTAGGAGGTTCACGTTCCAATGGGGACATAAATGGTAATGCCTACTCTAGATTTGGCAGCCTCAGAACCCC CTCTCGTATTCCACAGTCTCCCAGTAGGTTTTCTAGGGGAGGGCCTCCAATTCATTCTGGAGGAAGAGGCCGAGGTGGAAGGGGGCACGATGGTCTGACA GGTTCAACAGTTAAAGTACGCCAGGGTCCCTACAAAGGTTATCGTGGGCGTGTTATTGAAGTTAAAGGCACATCAGTTCGTGTTGAATTGGAGTCCCAAA TGAAGGTTGTGACAGTTGACCGCAACCATATATCTGACAATGTGGCTGTAACTCCATATCGTGAATCTCGATACGGGATGGGAAGTGAAACCCCAATGCA TCCTTCTCGAACTCCCTTACATCCATATATGACTCCTATGAGAGATCCTGGAGCGACCCCTATTCACGATGGAATGAGAACACCTATGCGTGACCGGGCA TGGAATCCTTATACACCAATGAGTCCTCCAAGGGATAACTGGGAAGATGGAAATCCAGGCTCTTGGGGAGCAAGTCCACAGTACCAACCAGGAAGCCCTG CTTCACGGCCATATGATGCTCCAACTCCTGGTGCTGGTTGGGCCAGCACTCCTGGTGGCAATTATAGCGAGGCTGGGACTCCCCGGGACACTTCTGCCTA TGCCAATGCTCCAAGTCCATATTTACCATCAACACCTGGCGGGCAGCCTATGACACCAAATTCAGCGTCTTATCTTCCTGGAACCCCTGGAGGACAGCCT ATGACTCCAGGAACTGGTGGTCTGGACATGATGTCCCCAGTTTTAGGTGGGGACAACGAAGGCCCTTGGTTTATGCCAGAGATATTAGTCAATGTTCACA AGCCTGGAGAGGAGTCAATTGGAGTTATACGAGAGCTTCTTCCGGATGGATCTTGCAGGGTGGCTCTGGGATCTAGTGGAGATGGTGACACAATAATAGC CCTTCCCAGTGAAATGGAAGCTGTAGTACCAAGGAAATCAGACAAAATAAAAATCATGGGTGGTGCATTGCGTGGTGCCACAGGCAAGTTGATTGGTGTT GATGGTACTGATGGTATTGTAAAAGTAGACGACACATTGGATGTGAAGATTTTAGACTTAGTTATTTTGGCAAAATTAGCTCCATCTTGATAATCTTGTA GAGAAATTGTTCAATGCATGTCTTTCACCTCCTCTGTTACGAGCTCTTTTGTCTTTATCTCTCATTATACATCATATTCACGCACATGCTTCCTTTCTCC TCCCAAGTTGGTTTATTCAAGTTGGACATATCTTAATATCTAGTTTCAACTATGGATAATTTTTGCATCTGCTTCCCTTATGTATGGCGAGAAGCACGGG AGGAATGGTTAGGTATATCCATGACAAAAATGTAGACTATCCTTTGACTTGGGAGTGGAGATAGCAAAACAGTTAGCCCAGCCTGTTTTGTCCTACCACA ATTGCGGGTATGCCCACATTGACTTAATGGGTACAAAGGCGGTCCAAGATACCGTTGAATAATTTTAAAATAAAAAAAATTAAATAAAGTAGATAGAG
• Tissue: pods
• Gene name: LI_gene_195004;
• Additional information: details;

Expression of Ll_transcript_481618

FPKM

• PAB: 6
• PNAB: 3.2
• PS1: 5.4
• PS2: 6.5
• PS3: 6.9
• PW1: 7.4
• PW2: 7
• PW3: 8.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_481618

• Blastp: Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 79.46% of identity
• Blastx: Putative transcription elongation factor SPT5 homolog 1 from Arabidopsis with 70.4% of identity
• Eggnog: Transcription elongation factor(COG5164)
• Kegg: Link to kegg annotations (AT4G08350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416440.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;