Ll_transcript_479630

• Id Trinity: TRINITY_DN52720_c3_g3_i10
• Name Transcript: Ll_transcript_479630
• Sequence: ACACGGTTTATAGAGTTTTACAATCTAGTATTCATGCAATACAACAAAAAGGATGATGGCTCTCTTGAACCTCTTAAGCATAAAAAAATATAGATACTGG CATTGGACTTGAACGTACGAATTGACACAGTAGGAGTAATGTAACACAGCAAATTACCCTCCTTTCCATCTTTAATTTTCTCCCTCGTTGGCACGTCTAT CTTTCACTTTTTATTCAATGTGATTCCTTAGTTACTGTGATTTTGCTATGTTTAGATTGTTTATTCTGTCTGTTTTTGAAATCTGACCAACCACCATAGA CTTTAAGGCTGATTTTCAATTAAAAACAAATACAGGTTTATTCACTTTTTGCTTAGAGATTAACTGTGAATTTGATGCCAAAAAATTGGAGTAAACCACC ATTATAATAGCTAATGTTGTAAGCATCTATCATTAGTCCATGACTTTAGGAAATTACCATTTTTGTCATTGTTCTATTGGATTCCTCATGTGTACAATAT TCATTTTTTTTGTCGTTTCTAATTCTGTTTGGTAGTTAGTTTCCTAGTTCAGTTGCATCTTTTAAACATGTCATTCTATTATATATGTTTGGCTATTTGA AGCCTATAATCTGACAAGCTGAAATTATTTTAATGTGTAGCTAAATGTGATGGTTGTGTGCTGGCTCTGTTATTTAGGAAATTTTTGTTCGGACAAGAAA CCAGCTGCTGTAAATTGGATTGAGGG
• Tissue: pods
• Gene name: LI_gene_195013;
• Additional information: -

Expression of Ll_transcript_479630

FPKM

• PAB: 4.3
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.1
• PS3: 0.5
• PW1: 0.5
• PW2: 0.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479630

• Blastp: -
• Blastx: Alanine--tRNA ligase, chloroplastic/mitochondrial from Sorghum with 90% of identity
• Eggnog: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity)(COG0013)
• Kegg: Link to kegg annotations (SORBI_10g008780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004500706.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;