Id Trinity | TRINITY_DN52720_c3_g3_i12 |
---|---|
Name Transcript | Ll_transcript_479632 |
Sequence | AGAGTTCAGACCAAACAAACTAAATAACAGAAAAAAACTGCTGTGACCTTTTCAGTTAACCCTTCCCTATTTCACATTACTCATTCTATTTTATGTGAAT AAATAATAAAGTTTTTCTGATTTCTGAGTATTAGGTCAGTGACATGAATAAAGCTAATAATTGTATGAGATGGGTTCTCTTGGATTTCATTCAAAAGTGC AATAACTTGAGATCCTTCAACAAAATTCATGCACACCTATTGACTTCTGGCCATGTTGCCAATGACCTTGTTCTCACCAAAGTTTCTAACTTTTTTGGAA AACATGTCACTGATCTCCATTACCCTTACAATTTCTTGAAGCATTTTGATTGGAAGTTGAGCTCTTTCCCTTGCAATTTGATTATTTCTGGATATGGTGC TGGCCACTTCCCCTGGGCTGCAATCCTAGTTTATAGACTTGTTGTGAGAAATGGGTTTGTGCCTGATGTGTACACTGTTCCTGCACTTTTGAAATCATGT GCTAAGTTTAAAGGGGTTAAGGAGGTTACACAGTTTCACTGTTTAGTTGTCAGAAATGCTTTGTGGTGTGACATTTATGTTCAGAACAGTCTTGTCCATG TTTATAGCATTTGTGGCGACACTGCTTCTGCTGTTAAGGTGTTTGATGATATGCTTGTGAGAGATGTGGTCTCTTGGACTGGTTTGATATCTGGTTATGT CAAGGCTGAGTTATTTGATAATGCCATTGCATTGTTTCTGAGGATGGATGTGGAGCCTAATGTGGCTACATTTGTTAGCATAATTGGGGCTTGTGGGAAG CTGAGTTTTTTAAATTTGGGAAAAGGAATTCATGGGCTGGTCGTAAAATGTCCACACGGGAAGGAATTGGTGGTAAGCAATGCTTTGATAGATATGTATA TGAAGTGTGAGTCTGTTACTGATGCAAAGCGAATATTCAATGAGATACCTGAAAAGGACGTTATTTCTTGGACTAGTATGATAAGTGGATTGGTGCAAAG TCAGTCTCCTAGGGAATCAATAGACTTGTTCTGTGAAATGCAGGCTTCGGGTTTTGAGCCTGATGGGATGATACTAACCAGTGTGCTTTCTGCTTGTGCC AGTCTTGGGCTTCTTGATTATGGAAGATGGGTCCATGAATACATTGATCATAGCCGTATCAAATGGGATGTTCATATAGGTACAGCATTGGTAGACATGT ATGCAAAATGTGGTTGCATAGAGATGGCACAACATATTTTTAACGAGATGCCTTCTAAGAATATCCGTACTTGGAATGCCTATGTAGGTGGTTTAGCAAT ACATGGGCATGGACAAGAAGCGTTGGAACAATTTGGAGAATTGATTGAATCTGGTACAAGGCTTAACGAGGTGACATTTCTAGCAGTCTTAACAGCATGC TGCCATTCTGGCTTGGTTGATGAAGGCCGTAGGTATTTCAATGAGATGACAAGTCCAAGCTACAACTTTTCTCCCTGGTTAGAGCACTATGGATGTATGG TTGATTTACTCTGCAGGGCTGGATTGGTGGGGGAAGCTATGGAGTTGATAAAGACAATGCCCATGCCACCCGATGTACAGATCATAGGAGCACTTTTGAG CGCCTGCAATACCTATGGAAACACTGGATTTTCTCAAGAAATGTTGAAATCTCTCCATAAATTTGAATACCAAGATAGTGGGATATATGTGCTTCTGTCT AATCTATATGCAGCTAATAAGAATTGGGGTGAAGTACGAAGCTTGAGGAGACTGATGAAGGAGAAAGGAATAAGCAAGGCTCCGGGTTCTAGCCTTATAA GGGTGGATGGTAAGAGTCATGAATTTTTAGTTGGAGATAGTAAACATCCTCGAAGTGAGGATATTCATGTACTACTAAACATCCTTGCCAATCAAATCTA CCTTGAGGGGAATATCAATACCATTTCCTGATCAAACAGATATCTGGAGCTGCCTGAACATGCATGCAATGCAAGGTGAAAATACAGGAAACACGTATAC AGAGACGTATCTGACAAATGATTTGTCCATAATATTGTTTTTGAACTTACTCATCGGACAAAGAATTGAATAAGGTAACTCTTTTTTTTGAAGAATCAAC ATAAAATATTCACCCGAATTACACTCTTTGTTTTCTATGTCCCACAATCCAGAAGAATAAACGAAAATTATGGAATTAAACCTCAACCGTTTTCTGATTG ATAGCTGTGTATCTCCATCTCTCCTTCTCCACAAAGTCTGCATCAAGAAACCGAGCAACAAAAGCCCACAGTTTGTATACATCTTCAAAATTAGACAGGA AACTTAATGCAGCAGTAACCACAGTTACTCCAAGGTTATATCTATCTTTTTTCTTGTTCCCAGTCACATCCTGGCCTTTGCCTTCTTTGCTCTGTAGAAC TCTTCCCTTCTCCTCTGCATACTTATCTGCAAACCAGATATGATGAAGAAATCCATAGCTGAGAGAAATGTTGTTTCTGTCAGCAAGTTTTTGTACCAGA ACAGGTTCCACCTTTTCTCCTTTCCAGTCACACACATTGAATGCCAAAGCAGCCCCCCTGTCAAATTTTATCTTTGGGCCATAAATCTTGACTAGGGGAG CCCCTTCTGTGTTAGGGTGTTTAAGCTTCAACATTGAGTTCACCAGCCAGTTGATCAGGTACCTAGCTCTGTTTGTGATCACTCTCAATCCTAAGGAGTC CAACTGATCCAAACACCTGCATTCAGTGTAAAATCTTCCATTTTCACTATCTTGGACATTCTTATCTTGATGGTTCTCATTTGACCTTTGTGCTCCATCA ACATCTGCAGGTACCTCAATGATTTGAAGCTCGGATGCTTCTCCTTCTCCTCCTTCAAACTGCGTTGTGTGTATCCGACCAGAGAAAGAAGTCAAAGAAG CTAATTCTTCTTCTTGTAAGCTAGATGCTGCTGACTTTTGTTCAATCTCTACATCATTTCCAGAAGAATCTTCCGACAGCTGATCCTGCCTCCTTTCAGG CATGAGGTTTACAATTCCTGCAATAGAAGAAGATTCCAGTACGGAAAGAGCAGATTTCTTGACAAACAGGCATCCAAACCCAGATGGATTTTCTCCGAAA ACCTTATAGAATGAACAAATGAGAAATTCAGGGCGAAAGAGAGAGAGGCCAAAGCTGTCCATGTCTTTAGGTCCCAATGCACAAGCATCAATCAACACAT GCCACCCATTCTCTTGTGCTATGCTCATCCATAGATAGGGATATCTTGCTCCCGTTACTCTGGAATGAAGTGGAAACACAAAAAGACCATTCTTTTTCTT CTTATTCCTCTTACTCTCAATCATCTTCCTCAACTTTGTTGACTGCATCCTGAGCCTTGGCCATGAGAACTCTGCCGACATAGCCTTTGCCCCTCTCTTC TCTGAGTAACTAATCATTGCTTCTACTGCCTCGCTCTCATAGTCATAAACTGTCAGAAGCTTCTTACTAGATTGGAATGGATAGGAATCAGCTACTAGTT TGAAAGCTGCTGTCCTGTTTGCAGTGAAAACCATGAAATAATCCTTTTCAGAAATGTTAAGGAACTTCATTATTCTCCTCCTCATTGCAGCTTCAAACTT TGACTCATGCCCTCCATGAAGCAGTAAAGCCTTCAGATTCCCGGTCTTATATGATATGCTGAAGAAGGGAATATCTGAATATTGCGGTGGAGATTGAGGT GGTGTTGAAGAAGAAGCAATTTGAGTTTTTGAAGCATCAAGGTGTTGTAGTTGTTGGCGTTGGTAGCAAGAAAAGAGGCCAGTACCAATATAATCAAGGC AAGTATGGTTGGAGAAAGAGAGATGGCAGTATTCTTTGGCTCTGACTTTGTCAACTTGCTCTGTCTCTGAGTATTGAGGGTACACTTGGTTGAACTCACT GAATGATTCATGAAAAGATGGAAGGGACTCATGGTTGGTGAATTTGGTGTTTGGAAAGACAGAGGATGTTGTTGTTGCTGCAAAGCTGTGTCTGCACTGT GAAGAACTGTTTCTTGGTTTTAATATATTATGAGATTGTGGTGATGAGTTGAACAATAAGGTTGGGCAGCAACCTTGAAGGCATACTTTTGAGACCTCAT TTTGGCTCAGTGACTTCATCTTTTTCTTCTTCAATGCACTCACTGACAACAATTCTAGTGGTTTATATAATGTACCAGTTGGACAGGATGATTGTCATGG TATATTATGGTTTTTTCTTTCATTAAAAATCAGTGGTTGTGATTGTGACATTATGTTTGTGGCTCTATAACAAATCCTGGAGTTGTTGACGTGAATGTTG TATTATTAAGTGTGTATACTAATTGGGGCAATGTTGTGTTCAGGGATCACTCTAAATTATTTATGTTGTATGATTTAAGCCATTATTATTCTTCTCAACT TCTCAATTCTCATCCTCCTCTCATAAGTTATGATGTTACTACTAAATTTGACTAAGTTCTCCC BLAST |
Tissue | pods |
Gene name | LI_gene_195013; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479632
Blastp | Molybdenum cofactor sulfurase from Bos with 23.08% of identity |
---|---|
Blastx | Pentatricopeptide repeat-containing protein At4g38010 from Arabidopsis with 54.41% of identity |
Eggnog | cysteine desulfurase(COG0520) |
Kegg | Link to kegg annotations (281226) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442158.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |