Ll_transcript_479638

• Id Trinity: TRINITY_DN52720_c3_g9_i1
• Name Transcript: Ll_transcript_479638
• Sequence: TTTCATTTGGTCTTTTACTGATGATTTTGTTGAATTTTTCCCTCCCCTGAAGAATATGTATTTCTATGAATTTGGGATGTGGTTAACACTGAGACCTAAA TTTAAGAAGTGAACTTCGCAATTGTGGTGCTTACTTTGGGCAATTTAATTTACTGTGTACATTCATTTTATGCGCACCACCTATTTGACAAAATGATTTA GAGAATGCTGATTTACTTGTATTCTCTTCAATGAGAGTCATGAAAATCTTGAGAAGATGTGACATATTCTGTCATAATTCTTCCACCCATTTTAGAAAAT TATCAGTTATATCCGAGGCCAAACGAGATGTCTTAAAGATGAAACAGGATGTTAACATGGATGCAGATGCTGCTGCTGCTCGTGTTTCAAATTTACAATA TGTTTTGCAGTTATGTGCAAAAACAAGATCGTCCATAGGAGGAATGTCATGCCATGCTCAAACTATTCGACTCGGGTTGGAAATGGACATATTGACATCT AATATGCTGATTAACATGTATTCCAAATGTGCTTTACTCGATAATGCTCGCAAAAAATTCGATGAAATGCCATTAAGAAGCTTAGTTTCATGGAACACGA TGATTGGAGCACTTACTCAGAATGCAGAGGAACAAGAAGCTCTCACACTTTTCATTCAAATGCAGAGAGAGGGAACACCGTTCAATGAATTTACCATTTC CAGTGTTCTATGTGCATGTGCCTTGAAATGTGCTATGTTTGAGTGTACACAGTTGCATGCTTTTTCAATTAAGGCGAAAATAGATTCTAATTGTTTTGTT GGAACTGCTTTACTTGATGTCTATGCTAAATGCTCTTCAATAAAAGATGCGAGTAAGATATTTGAGAGTATGACAGAAAGAAGTGCTGTTACTTGGAGTT CAATGGTAGCAGGTTATGTGCAAAATGGGTTTCATGAGGAGTCTTTGCTGCTTTTTCACAAGGCTCGAAAGTTGGGTTTTGACAACGACCCGTTTATGAT TTCATCTGCTATTTGTGCATGTGCAGCTTTGGCAACTTTGATTGAAGGGAAGCAACTACATGCTATTTCATCTAAGTCTGGAATTGGTTCCAATATATAT GTTGTTTCCTCTATTATAGATATGTATGCAAAATGTGGTTGCATAAGAGAAGCTTACCTTGTATTTCAAGGTGTTGAGGAGGTGACAAGCATTGTTTTGT GGAACGCAATGATTTGTGGGTTTGCTAAACATGCTCGTGCACTAGAGGCTATGATCTTATTCGAAAAAATGCAGCAGAGAGGCTTCTTTCCCGATGATGT AACATATGTGTCTGTATTAAATGCATGTAGTCACATGGGTTTGCATGAAGAAGGACAAAAGTATTTTGATCTCATGATCAGAGAGCACAATCTTAAACCC AGTGTCCTTCACTATTCATGTATGATCGACATTCTCGGTAGAGCCGGATTGCTTAACAAGGCTTATGCCTTAATAAAGAGAATGCCATTTCATGCGACTA GTTCTATATGGGGTTCCCTTTTAGCCTCTTGCAGAATTTACGGCAACATTGAGTTTGCTGAGATTTCTGCGAAACGTCTATTTGAAATGGAACCTGATAA TGCAGGTAACCACATTTTGCTAGCAAACATATATGCAGCAAATAAAAAGTGGGAGGATGTTGCAAGAACAAGGAAGCTTCTCAAAGAGAGTGATGTGAGG AAGGAGATGGGTGCAAGTTGGATTGAAATAAAAAATAAAGTTCACTTATTTACTGTTGGTGAAAGAAATCATCCACAAATTGAAGGGGTTTATGCTAAGT TGGATAATTTAGTGGAAGAGTTGAAGAAAGTGGGTTACAAGGTTGATACAAATCATGACCTGCATGATGTGGAAGAGAGCAGAAAACAGATTCTGTTGAG ACACCATAGTGAGAAGCTTGCCGTTACATTTGGATTGATGTGTTTGCCTAGTAATGATATACCAATAAGGATTATGAAAAACCTTAGAATTTGTGGTGAT TGCCACAATTTTATGAAACTTGTTTCTAGGTTTACTAGCAGGGTGATCATTGTTAGAGATACACATCGTTTTCACCACTTCAGGGATGGCTTTTGTTCTT GTGGAGAGTTTTGGTGAACTTTGCTATATTTGCTATATGCATTTTTTATATTTAAACCAAATAATGCGGATTTCAAGGGTAAAGCTTGGTGAATAAATAT GAATTCAG
• Tissue: pods
• Gene name: LI_gene_195019;
• Additional information: details;

Expression of Ll_transcript_479638

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.4
• PS2: 0.3
• PS3: 0.5
• PW1: 0.7
• PW2: 0.5
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479638

• Blastp: Pentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 54.8% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 54.8% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G04780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451505.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;