Ll_transcript_481185

• Id Trinity: TRINITY_DN52722_c0_g2_i8
• Name Transcript: Ll_transcript_481185
• Sequence: GAGATAGAAGAGACAAACATATTCGAGCTTGTTCAATTCTAATTCAAACTCCAACATTAACAAGACATGTGGGTCCATGCACGACACGTGGCACTACCAA ATCCATAGTCTTGAACATGCAGCAACAACATAATCGGTACCGTCTCTGACACGGGAATGAATTTCTCTCATCAATGGTTGTGTGAGAAAGAAAGCAGGCA CCCACTGTGAATACAAATTAAGTAACATTCCTTTGATTTGCTCCACATCCTAATCATCAATTCTAGAAAAATTCAATGATTTAAATTAATAAATGAATCT AAACCATTTGATTCCCAAAAAATTAATGGTTAAGATAAAAAGTAATTCTTTTAGACTTTATCCTGAAGTAACTTGATCCACACCCCTGGGTATATATCCC TTATCTCTTGTAATATAGTGAAACCTTTCATTCATTTCCATATTTTTTAACTTACCATTCATTATTCTGTTACATTACTCGACATAGGTAATAAGCGCTT CATTATTTTATTTTTATTTGTGCTGAGTAATTAGCTCGTGTTAGAGTTACATAAATTTAGCTGAGTGTGGTTGGATTTATTGACTTATTCAGCATGTTTG CATTAAAATATTTTATTATGACCAGTTTGGTGTGATTTTGTTGCTCAATAGCTTTCATCAAACCCTTTACTTTCCGTGAGTTTCAAGTCACCCAAATTTA ATTTTTTTTATCATTCTGTTCATTCTTAATTTTTGAAGTTTTTTTGTCACCCAATTCAGTTTGGTGAGAAAATTTTCAATCTTTAGATCTGATTTTTTTT GGGTCTATTTAAACGTGTCTATGATCATGGAGTATTCGATCAGAAGAGTAGCTTGTGATACTCAGGGTCATTATTCCACTGTCCTTTTCTTCTTCTGCTA TCTCTGGCAGTTGTCATTTTCTGTATCTTGCTTCTTAATTTGATAGATCTGAAGTGAATTTAATTTCAGAAGTGTTTGCAATGGCAGCCAATTCTTCTAA TGGAGATAATGCAGCATCAAAGCAACCTCCTTTGCCATCTCCTTTGCGTTTTTCCAAATTCTTCCAGTCCAACATGAGAATCTTGGTTACTGGAGGAGCT GGATTTATTGGTTCTCACCTAGTCGATAGATTGATGGAAAATGAAAAGAATGAGGTCATTGTTGCTGACAACTACTTCACCGGGTCGAAGGACAACCTCA AAAAATGGATCGGACATCCAAGATTTGAGCTTATCCGTCATGGTATAATTACGTCCTTGTTAAAACTGTTATGCATGCTATATAATGGAGTTTTTATTTT TGCAGGAGGTCTCATTTGGTAGTATGTTGAAGTCTAAACACTTATGTCTAGATTGTTAACTAATTTCTGTTACCTTAAAAGACTGAAACTGTTGAGTTGT TACAACTTGAACCACAAATTGAAGTTATTGATATATTAGCTGTTTTTTAATCAACCACAATCTGAATAGCTGGCTGTATGTTGTTTTGGTCAAGAAAAAC TAACAATGAAGCTGTAGTGTGACATCTTATATTCAGCATTGCCTTTAAATCTGAGTAATTGCATAGATCGTGCTGCTGATACACATTATCATTCCGACCC CTTTATAGATGTCACTGAGCCTTTGTTGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCTTCTCCCATTTTCTACAAATATAATCCTGTGAAG ACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCGAAGCGAGTTGGAGCAAGGATTTTACTTACATCAACTTCAGAGGTATATGGTG ATCCTCTTGTGCATCCCCAACCTGAAAGTTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGACGAAGGGAAACGTGTGGCTGAGACTTT GATGTTTGATTACCATAGGCAGCATGGACTAGAAATTCGCATTGCGAGAATCTTCAACACATATGGACC
• Tissue: pods
• Gene name: LI_gene_195025;
• Additional information: details;

Expression of Ll_transcript_481185

FPKM

• PAB: 15.1
• PNAB: 7.2
• PS1: 7
• PS2: 5.9
• PS3: 9.7
• PW1: 11.5
• PW2: 26.2
• PW3: 25

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_481185

• Blastp: UDP-glucuronic acid decarboxylase 6 from Arabidopsis with 71.57% of identity
• Blastx: UDP-glucuronic acid decarboxylase 5 from Arabidopsis with 98.33% of identity
• Eggnog: Nad-dependent epimerase dehydratase(COG0451)
• Kegg: Link to kegg annotations (AT2G28760)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448643.1)
• Pfam: NAD dependent epimerase/dehydratase family (PF01370.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;