| Id Trinity | TRINITY_DN52727_c6_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_479578 |
| Sequence | AAAAGAACCATGTTTTTATACAAACATTACAATAGGAAACTTAGCCTCACAAATTAAACAAAAAGGTTAAGTTTTCAAAAATGTTGCGTCATCTAATTGG TTGGACTTGTATTGTACAATTAACCTCTATTCATAGGAAGGGGAGAGGAAAGTAGAGAGAGTGGTGCATGGACTTGTAAAGTAAACCATTAGGGTCAACC AAACGCGTGGAAGGTGATGTTGGGTCAAAGATATTACTCTTGGAAAATAGATAGATACACATGTGGTAGTGAACATAACAGAAACACTGCAAGATGTCCA AAATTATTCTATCTTCACCTTCACCAACCCTTTTTCCCTTAACCCTTTTCTTCATCCTCCTCCTCCTACTACACCCATGTGAAGCTGAAGATGTTGCCAT TTACTGGGGTCAAAATGTGAAGGAGGGAAACCTTACTGAAACTTGTGCAACAGCAAAATATTCCTTCATCAATATAGCTTTTCTTACCACTTTTGGCAGC AGCAAAACCCCCCAACTCAACCTTGCAGGTCATTGTGACCCTTCTACTAATGGATGCACTTTGATTGGGAGAGACATCATGAATTGCCAAAATCAAGGGA TCAAGGTCATGCTCTCTATTGGAGGAGGATCTGAAGGCTCCTATGCTCTAACTTCTTCAGAAGATGCTAAAAATGTGTCAGATTACTTATGGAACAATTT CTTGGGTGGCACTAATTACACTTCTTCACGCCCTTTTGGAGATGCTATATTAGATGGCATAGATTTTGACATATATGGAACTAATTCACACTGGGATGAA CTTGCACGTTACCTCAAGTCACACAACAATAACACAACTACAAAAACTATATACTTAACTGCTGCACCTCAGTGTACATTTCCTGATTATTCAATGGGTA CTGCCCTTGACACAGGGCTCTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGTGATTATGGTAAAGAAAGTATTGACAACATTGTGAATGC ATGGAACAAGTGGACAACATCATTAAAAGGAGCAAAAGTATTTCTCGGGCTACCAGCAGATCCAGCAGCTGCGGCAACAGGTTATGTTCCACCTGATGTT TTAGAATCTAAGGTCTTACCTATGATAAATAAGTCACCAAATTATGGAGGTTTAATGTTGTGGTCAAGGTACTATGATAAAATGAGTGGATATAGTACTG ACATTCAGATAAATGTTTTATGCACACAGCAAAGCATTAACACATGCAGGAGTCATGACAGTGGCTTCACACAACGTTATGGTTTTGTGTCCATAGCTGG TGTTAAGGTTTATGATGGTGATAAGAACATTGATGCAAAGTGCTGTGAGATCATATGTTGGAATAACTGTTCTTGCGAAGCTTACGCGCTAGTGAATCAT AATAACAACACTGGATGCCAGATATGGGGAAAAGGAGCGAGATTGATTAGAGATTCTGGAGAAAAGGGAGAGCCAATGATGCAAATCTACTTTGTTAAAC ACAAAGTGAACAGGTGGTGGATATGGCTCATAATTGGTGTTGGAGGAGCCCTTTCATTACCTGTGATCTTCTATTTATGCTATACCATCTGGAAAAAATA TAAAGCAAAAGTGGATAGAAAAATGATGAAGAAGAAGTTATTACATGAGATTGGAGGTAATGCAATGCTTTCGATGGTGTACGGAAAAGCCAGGAAAAGA AAGAACAAGGAAAAGACAAACAATGAGGTGGAAATATTTAGTTTTGAAACCATTGTTGCTGCCACAAACAATTTCTCTGTTGCTAATAAGCTAGGAGAGG GTGGTTTTGGTCCTGTTTATAAGGGAACTTTAAGTGATCAGCAAGAGGTAGCAATAAAGAGACTTTCTAAAAGTTCAGGGCAAGGGCTGATAGAGTTTAA GAATGAAGCTAAACTCATGGCTAAACTGCAACACACTAATCTTGTAAAGCTTTTAGGATTTTGCATCGAGAGAGATGAAAGAGTACTAGTTTATGAGTAC ATGTTGAATAAGAGCTTAGACTTCTACCTATTTGATTCAACTAGAAGGAATTTGCTAGACTGGGGAAAACGCTTGAACATCATTGGAGGCATTGCTCAAG GACTTCTTTATCTTCACAAGTATTCAAGGCTAAAGGTGATACACCGGGACCTGAAAGCAGGCAACATATTACTTGATGAAGAGTTGAATCCTAAAATATC TGATTTTGGCATGGCTCGAATATTTGGTCATAGAGGATCAGAAGAAAACACAAATAGAGTTGTTGGTACATACGGCTACATGTCTCCTGAGTATGCAATG AATGGTGTTGTGTCAATCAAAACAGATGTATTCAGCTTTGGTGTATTACTATTAGAGATTCTAAGTGGTAAGAAGAATAATAGTCGCTATCATCCCGACC GTCCACTGAGCCTCATAGGACATGCCTGGCAGCTGTGGAATGAAGGCAGAGCTCCTGACCTAATAGACCCAGCATTTAATGAGTCAAGTAATGAGAATGA AGTTGTGAGATGTATTCACATTGGTCTATTGTGTGTACAAGATCAGGCAACAGATAGACCTACAATGTTAGAGGTTGTTTCTTTTCTATCAAATGAAACA ATCAAACTCCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTTGCTGTGGAAGAGTCAGAGATTCCTAACAGTAGGCAAGAATATCATACCTTAAATG ATGTAACAATTTCTAGTATGTATGGCAGATAGAATATTATTATTTTGACACCAAAAAATATTAGATAATTTTGCATAGTACTTACTTTATTCAGCTTACA CAATTATTGGCTACAAGTTTTGTTTTGTGAAGCAAATACAAAGTGTGTATGCATTGGAAAAGAGGTGGTGATGTCACACACAGCCTAGCAAACAAACCAT GTTACTTGCAGCCATTGTTAACAAATTCTATCATACCACGACACACGACATAAACGCAGATCTCTGCAACTATCCTACTTGATAAGGGCCATGTTTCCAA AACATATGTATAAAACAAAAATAATAATTGTTCTTTGTGTATATCAATTCTTCCCCTCTACTTGAAATTTTAAATCTTAATCAAATTTATTTTATCTCTA ATAACAAAGTAAAATCTTTATTCAATAGCTAATGTTTTCCACGTGTAAAAGATTAAGTGGTCCAAGTGTGTTTTACTTCCCCTTCTAGCATCCGAATCTG ATCATAGTGGGACTAATAACAAAACAGAACTCATTTGTGTTGTGTCTTTGTTTCATAATAGAAAGACAGTTAAGTGGTACAAGTTTACAGTTACCTCTAT AGTTAGCAACTAAAAAACATGTTATTGTGATGTTAGTGTTGTGTGATAGAGGAAGGTGGTGAAAATGGATTTTTGGCCAGAATATCTTGCAAGAAGTTGG GGGAGCGAATTTGTAGCAGGAGGAATTGGAGGAACTGCTGGTATAGTATCAGGATACCCATTAGATGGAGGTAAGGAAGAAATGGGAGAGAACCAGTTCG CTAGAGAACCACGAATCGGTTCGTTCGAACTGATTCGCGGTTCTCTGTGAAGTTGAGCGAATCTTGTTTCTATGATTGTAATTGACTACAAATGAAGTTA TTATTTTTGTTTTCTTTTACTGCAGAATGCTATGGTTTTCCAAATTTATGCAGTTCTGTCTAAGGCATTTTGCACATCTGTTTCTTCTAATGACCCTCCT TCGTTGAAGGGTGTTGCCTTAGGAGGAGTTGGAACAAGTGCCTTCCAAAGTCTATTGCTTTCCCCTGTAGAGTTGGTGAAAATTCGCCTTCAACTGCAGA GCACGGGCCAATCTTCGGCATCCGAAAAGGGTCCTGTAAAGGTTGCTAAGAACATATGGAAAAATGAGGGACTTCGCAGAATTTATAGAGGACTAGACAT TACTATGCTCAGAGATGCACCTGCATATGGTTTATACTTTATACTTCTGGACTTATGAGTACACTAGAGAAAACTTCACCCAGGTTGCAGAAAAAGTAGT GAAGAAAGCTTGAATACTATGTTAGTAGCAGGAGGATTAGCCGGTTTATCGAGTTGGATTTTCAGCTACCCTTTGGATGTTATAAAGACAAGGTTACAGG CTGAAACACCTTGTTCACAGAAATATAAAGGCATTTTGGATTGCCTCAGAAATAGCATCAAAGAAGAAGGATACAATGTGCTATGGAGGGGTTTAGGAAC TGCAGTTTCTAGAGCTTTTGTAGTTAATGGTGCTGTGTTTTGTGCTTATGAGATTACTCTAAGGTGTTTGTTTAACAATTCAAGCATCCAAATATAGGAT TCAACAAAGGAGCATTACTCTTCCCAATGTTTTTTAGGAGAGACATGATAAAGTATAACAAAAAGGCTTTGATATGAGACAATCATTACTTGATGTGGAA GCCAAAACAAAAAATTCTTGTTGCTAAAGTGGTAATGTAAAGGGTCAAAACATCCAACAGAGTAAATCCAACATAGATGATTGAAGGTCTTTGTACAACT GATTCTGTTCAATATCACTATAGCTTGCTCCTTTTTTCTTTGATTTCTTTTATTGTCTAAACCATCAACAGTTAGACCCTTCACATTTTGAAGTATTATT GTAATACAAGTTATTAATGGAAACAGACATTGGCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_195071; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479578
| Blastp | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 from Arabidopsis with 47.22% of identity |
|---|---|
| Blastx | Cysteine-rich receptor-like protein kinase 10 from Arabidopsis with 57.19% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (AT3G16030) |
| CantataDB | Link to cantataDB annotations (CNT0001079) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458282.1) |
| Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |