Id Trinity | TRINITY_DN52727_c6_g1_i26 |
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Name Transcript | Ll_transcript_479592 |
Sequence | AAAAGAACCATGTTTTTATACAAACATTACAATAGGAAACTTAGCCTCACAAATTAAACAAAAAGGTTAAGTTTTCAAAAATGTTGCGTCATCTAATTGG TTGGACTTGTATTGTACAATTAACCTCTATTCATAGGAAGGGGAGAGGAAAGTAGAGAGAGTGGTGCATGGACTTGTAAAGTAAACCATTAGGGTCAACC AAACGCGTGGAAGGTGATGTTGGGTCAAAGATATTACTCTTGGAAAATAGATAGATACACATGTGGTAGTGAACATAACAGAAACACTGCAAGATGTCCA AAATTATTCTATCTTCACCTTCACCAACCCTTTTTCCCTTAACCCTTTTCTTCATCCTCCTCCTCCTACTACACCCATGTGAAGCTGAAGATGTTGCCAT TTACTGGGGTCAAAATGTGAAGGAGGGAAACCTTACTGAAACTTGTGCAACAGCAAAATATTCCTTCATCAATATAGCTTTTCTTACCACTTTTGGCAGC AGCAAAACCCCCCAACTCAACCTTGCAGGTCATTGTGACCCTTCTACTAATGGATGCACTTTGATTGGGAGAGACATCATGAATTGCCAAAATCAAGGGA TCAAGGTCATGCTCTCTATTGGAGGAGGATCTGAAGGCTCCTATGCTCTAACTTCTTCAGAAGATGCTAAAAATGTGTCAGATTACTTATGGAACAATTT CTTGGGTGGCACTAATTACACTTCTTCACGCCCTTTTGGAGATGCTATATTAGATGGCATAGATTTTGACATATATGGAACTAATTCACACTGGGATGAA CTTGCACGTTACCTCAAGTCACACAACAATAACACAACTACAAAAACTATATACTTAACTGCTGCACCTCAGTGTACATTTCCTGATTATTCAATGGGTA CTGCCCTTGACACAGGGCTCTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGTGATTATGGTAAAGAAAGTATTGACAACATTGTGAATGC ATGGAACAAGTGGACAACATCATTAAAAGGAGCAAAAGTATTTCTCGGGCTACCAGCAGATCCAGCAGCTGCGGCAACAGGTTATGTTCCACCTGATGTT TTAGAATCTAAGGTCTTACCTATGATAAATAAGTCACCAAATTATGGAGGTTTAATGTTGTGGTCAAGGTACTATGATAAAATGAGTGGATATAGTACTG ACATTCAGATAAATGTTTTATGCACACAGCAAAGCATTAACACATGCAGGAGTCATGACAGTGGCTTCACACAACGTTATGGTTTTGTGTCCATAGCTGG TGTTAAGGTTTATGATGGTGATAAGAACATTGATGCAAAGTGCTGTGAGATCATATGTTGGAATAACTGTTCTTGCGAAGCTTACGCGCTAGTGAATCAT AATAACAACACTGGATGCCAGATATGGGGAAAAGGAGCGAGATTGATTAGAGATTCTGGAGAAAAGGGAGAGCCAATGATGCAAATCTACTTTGTTAAAC ACAAAGTGAACAGGTGGTGGATATGGCTCATAATTGGTGTTGGAGGAGCCCTTTCATTACCTGTGATCTTCTATTTATGCTATACCATCTGGAAAAAATA TAAAGCAAAAGTGGATAGAAAAATGATGAAGAAGAAGTTATTACATGAGATTGGAGGTAATGCAATGCTTTCGATGGTGTACGGAAAAGCCAGGAAAAGA AAGAACAAGGAAAAGACAAACAATGAGGTGGAAATATTTAGTTTTGAAACCATTGTTGCTGCCACAAACAATTTCTCTGTTGCTAATAAGCTAGGAGAGG GTGGTTTTGGTCCTGTTTATAAGGGAACTTTAAGTGATCAGCAAGAGGTAGCAATAAAGAGACTTTCTAAAAGTTCAGGGCAAGGGCTGATAGAGTTTAA GAATGAAGCTAAACTCATGGCTAAACTGCAACACACTAATCTTGTAAAGCTTTTAGGATTTTGCATCGAGAGAGATGAAAGAGTACTAGTTTATGAGTAC ATGTTGAATAAGAGCTTAGACTTCTACCTATTTGATTCAACTAGAAGGAATTTGCTAGACTGGGGAAAACGCTTGAACATCATTGGAGGCATTGCTCAAG GACTTCTTTATCTTCACAAGTATTCAAGGCTAAAGGTGATACACCGGGACCTGAAAGCAGGCAACATATTACTTGATGAAGAGTTGAATCCTAAAATATC TGATTTTGGCATGGCTCGAATATTTGGTCATAGAGGATCAGAAGAAAACACAAATAGAGTTGTTGGTACATACGGCTACATGTCTCCTGAGTATGCAATG AATGGTGTTGTGTCAATCAAAACAGATGTATTCAGCTTTGGTGTATTACTATTAGAGATTCTAAGTGGTAAGAAGAATAATAGTCGCTATCATCCCGACC GTCCACTGAGCCTCATAGGACATGCCTGGCAGCTGTGGAATGAAGGCAGAGCTCCTGACCTAATAGACCCAGCATTTAATGAGTCAAGTAATGAGAATGA AGTTGTGAGATGTATTCACATTGGTCTATTGTGTGTACAAGATCAGGCAACAGATAGACCTACAATGTTAGAGGTTGTTTCTTTTCTATCAAATGAAACA ATCAAACTCCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTTGCTGTGGAAGAGTCAGAGATTCCTAACAGTAGGCAAGAATATCATACCTTAAATG ATGTAACAATTTCTAGTATGTATGGCAGATAGAATATTATTATTTTGACACCAAAAAATATTAGATAATTTTGCATAGTACTTACTTTATTCAGCTTACA CAATTATTGGCTACAAGTTTTGTTTTGTGAAGCAAATACAAAGTGTGTATGCATTGGAAAAGAGGTGGTGATGTCACACACAGCCTAGCAAACAAACCAT GTTACTTGCAGCCATTGTTAACAAATTCTATCATACCACGACACACGACATAAACGCAGATCTCTGCAACTATCCTACTTGATAAGGGCCATGTTTCCAA AACATATGTATAAAACAAAAATAATAATTGTTCTTTGTGTATATCAATTCTTCCCCTCTACTTGAAATTTTAAATCTTAATCAAATTTATTTTATCTCTA ATAACAAAGTAAAATCTTTATTCAATAGCTAATGTTTTCCACGTGTAAAAGATTAAGTGGTCCAAGTGTGTTTTACTTCCCCTTCTAGCATCCGAATCTG ATCATAGTGGGACTAATAACAAAACAGAACTCATTTGTGTTGTGTCTTTGTTTCATAATAGAAAGACAGTTAAGTGGTACAAGTTTACAGTTACCTCTAT AGTTAGCAACTAAAAAACATGTTATTGTGATGTTAGTGTTGTGTGATAGAGGAAGGTGGTGAAAATGGATTTTTGGCCAGAATATCTTGCAAGAAGTTGG GGGAGCGAATTTGTAGCAGGAGGAATTGGAGGAACTGCTGGTATAGTATCAGGATACCCATTAGATGGAGAATGCTATGGTTTTCCAAATTTATGCAGTT CTGTCTAAGGCATTTTGCACATCTGTTTCTTCTAATGACCCTCCTTCGTTGAAGGGTGTTGCCTTAGGAGGAGTTGGAACAAGTGCCTTCCAAAGTCTAT TGCTTTCCCCTGTAGAGTTGGTGAAAATTCGCCTTCAACTGCAGAGCACGGGCCAATCTTCGGCATCCGAAAAGGGTCCTGTAAAGGTTGCTAAGAACAT ATGGAAAAATGAGGGACTTCGCAGAATTTATAGAGGACTAGACATTACTATGCTCAGAGATGCACCTGCATATGGTTTATACTTTATACTTCTGGACTTA TGAGTACACTAGAGAAAACTTCACCCAGGTTGCAGAAAAAGTAGTGAAGAAAGCTTGAATACTATGTTAGTAGCAGGAGGATTAGCCGGTTTATCGAGTT GGATTTTCAGCTACCCTTTGGATGTTATAAAGACAAGGTTACAGGCTGAAACACCTTGTTCACAGAAATATAAAGGCATTTTGGATTGCCTCAGAAATAG CATCAAAGAAGAAGGATACAATGTGCTATGGAGGGGTTTAGGAACTGCAGTTTCTAGAGCTTTTGTAGTTAATGGTGCTGTGTTTTGTGCTTATGAGATT ACTCTAAGGTGTTTGTTTAACAATTCAAGCATCCAAATATAGGATTCAACAAAGGAGCATTACTCTTCCCAATGTTTTTTAGGAGAGACATGATAAAGTA TAACAAAAAGGCTTTGATATGAGACAATCATTACTTGATGTGGAAGCCAAAACAAAAAATTCTTGTTGCTAAAGTGGTAATGTAAAGGGTCAAAACATCC AACAGAGTAAATCCAACATAGATGATTGAAGGTCTTTGTACAACTGATTCTGTTCAATATCACTATAGCTTGCTCCTTTTTTCTTTGATTTCTTTTATTG TCTAAACCATCAACAGTTAGACCCTTCACATTTTGAAGTATTATTGTAATACAAGTTATTAATGGAAACAGACATTGGCCA BLAST |
Tissue | pods |
Gene name | LI_gene_195071; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479592
Blastp | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 from Arabidopsis with 47.22% of identity |
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Blastx | Cysteine-rich receptor-like protein kinase 10 from Arabidopsis with 57.19% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G16030) |
CantataDB | Link to cantataDB annotations (CNT0001079) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458282.1) |
Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |