Id Trinity | TRINITY_DN52727_c6_g1_i5 |
---|---|
Name Transcript | Ll_transcript_479570 |
Sequence | AAAAGAACCATGTTTTTATACAAACATTACAATAGGAAACTTAGCCTCACAAATTAAACAAAAAGGTTAAGTTTTCAAAAATGTTGCGTCATCTAATTGG TTGGACTTGTATTGTACAATTAACCTCTATTCATAGGAAGGGGAGAGGAAAGTAGAGAGAGTGGTGCATGGACTTGTAAAGTAAACCATTAGGGTCAACC AAACGCGTGGAAGGTGATGTTGGGTCAAAGATATTACTCTTGGAAAATAGATAGATACACATGTGGTAGTGAACATAACAGAAACACTGCAAGATGTCCA AAATTATTCTATCTTCACCTTCACCAACCCTTTTTCCCTTAACCCTTTTCTTCATCCTCCTCCTCCTACTACACCCATGTGAAGCTGAAGATGTTGCCAT TTACTGGGGTCAAAATGTGAAGGAGGGAAACCTTACTGAAACTTGTGCAACAGCAAAATATTCCTTCATCAATATAGCTTTTCTTACCACTTTTGGCAGC AGCAAAACCCCCCAACTCAACCTTGCAGGTCATTGTGACCCTTCTACTAATGGATGCACTTTGATTGGGAGAGACATCATGAATTGCCAAAATCAAGGGA TCAAGGTCATGCTCTCTATTGGAGGAGGATCTGAAGGCTCCTATGCTCTAACTTCTTCAGAAGATGCTAAAAATGTGTCAGATTACTTATGGAACAATTT CTTGGGTGGCACTAATTACACTTCTTCACGCCCTTTTGGAGATGCTATATTAGATGGCATAGATTTTGACATATATGGAACTAATTCACACTGGGATGAA CTTGCACGTTACCTCAAGTCACACAACAATAACACAACTACAAAAACTATATACTTAACTGCTGCACCTCAGTGTACATTTCCTGATTATTCAATGGGTA CTGCCCTTGACACAGGGCTCTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGTGATTATGGTAAAGAAAGTATTGACAACATTGTGAATGC ATGGAACAAGTGGACAACATCATTAAAAGGAGCAAAAGTATTTCTCGGGCTACCAGCAGATCCAGCAGCTGCGGCAACAGCAAAGCATTAACACATGCAG GAGTCATGACAGTGGCTTCACACAACGTTATGGTTTTGTGTCCATAGCTGGTGTTAAGGTTTATGATGGTGATAAGAACATTGATGCAAAGTGCTGTGAG ATCATATGTTGGAATAACTGTTCTTGCGAAGCTTACGCGCTAGTGAATCATAATAACAACACTGGATGCCAGATATGGGGAAAAGGAGCGAGATTGATTA GAGATTCTGGAGAAAAGGGAGAGCCAATGATGCAAATCTACTTTGTTAAACACAAAGTGAACAGGTGGTGGATATGGCTCATAATTGGTGTTGGAGGAGC CCTTTCATTACCTGTGATCTTCTATTTATGCTATACCATCTGGAAAAAATATAAAGCAAAAGTGGATAGAAAAATGATGAAGAAGAAGTTATTACATGAG ATTGGAGGTAATGCAATGCTTTCGATGGTGTACGGAAAAGCCAGGAAAAGAAAGAACAAGGAAAAGACAAACAATGAGGTGGAAATATTTAGTTTTGAAA CCATTGTTGCTGCCACAAACAATTTCTCTGTTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAACTTTAAGTGATCAGCAAGAGGT AGCAATAAAGAGACTTTCTAAAAGTTCAGGGCAAGGGCTGATAGAGTTTAAGAATGAAGCTAAACTCATGGCTAAACTGCAACACACTAATCTTGTAAAG CTTTTAGGATTTTGCATCGAGAGAGATGAAAGAGTACTAGTTTATGAGTACATGTTGAATAAGAGCTTAGACTTCTACCTATTTGATTCAACTAGAAGGA ATTTGCTAGACTGGGGAAAACGCTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGGCTAAAGGTGATACACCGGGA CCTGAAAGCAGGCAACATATTACTTGATGAAGAGTTGAATCCTAAAATATCTGATTTTGGCATGGCTCGAATATTTGGTCATAGAGGATCAGAAGAAAAC ACAAATAGAGTTGTTGGTACATACGGCTACATGTCTCCTGAGTATGCAATGAATGGTGTTGTGTCAATCAAAACAGATGTATTCAGCTTTGGTGTATTAC TATTAGAGATTCTAAGTGGTAAGAAGAATAATAGTCGCTATCATCCCGACCGTCCACTGAGCCTCATAGGACATGTAAGTTTTCTAAATTGACTAAACAA CAATCAAGACTTAATCTTACTTGGTAGAGTCGGCTATTTCCCAATACTGACTGATTCATAAAATTCATGCTTATCAATGGTTCATAACTTTTATGCCGAT GCTCGGATTGTTGTAGGCCTGGCAGCTGTGGAATGAAGGCAGAGCTCCTGACCTAATAGACCCAGCATTTAATGAGTCAAGTAATGAGAATGAAGTTGTG AGATGTATTCACATTGGTCTATTGTGTGTACAAGATCAGGCAACAGATAGACCTACAATGTTAGAGGTTGTTTCTTTTCTATCAAATGAAACAATCAAAC TCCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTTGCTGTGGAAGAGTCAGAGATTCCTAACAGTAGGCAAGAATATCATACCTTAAATGATGTAAC AATTTCTAGTATGTATGGCAGATAGAATATTATTATTTTGACACCAAAAAATATTAGATAATTTTGCATAGTACTTACTTTATTCAGCTTACACAATTAT TGGCTACAAGTTTTGTTTTGTGAAGCAAATACAAAGTGTGTATGCATTGGAAAAGAGGTGGTGATGTCACACACAGCCTAGCAAACAAACCATGTTACTT GCAGCCATTGTTAACAAATTCTATCATACCACGACACACGACATAAACGCAGATCTCTGCAACTATCCTACTTGATAAGGGCCATGTTTCCAAAACATAT GTATAAAACAAAAATAATAATTGTTCTTTGTGTATATCAATTCTTCCCCTCTACTTGAAATTTTAAATCTTAATCAAATTTATTTTATCTCTAATAACAA AGTAAAATCTTTATTCAATAGCTAATGTTTTCCACGTGTAAAAGATTAAGTGGTCCAAGTGTGTTTTACTTCCCCTTCTAGCATCCGAATCTGATCATAG TGGGACTAATAACAAAACAGAACTCATTTGTGTTGTGTCTTTGTTTCATAATAGAAAGACAGTTAAGTGGTACAAGTTTACAGTTACCTCTATAGTTAGC AACTAAAAAACATGTTATTGTGATGTTAGTGTTGTGTGATAGAGGAAGGTGGTGAAAATGGATTTTTGGCCAGAATATCTTGCAAGAAGTTGGGGGAGCG AATTTGTAGCAGGAGGAATTGGAGGAACTGCTGGTATAGTATCAGGATACCCATTAGATGGAGGTAAGGAAGAAATGGGAGAGAACCAGTTCGCTAGAGA ACCACGAATCGGTTCGTTCGAACTGATTCGCGGTTCTCTGTGAAGTTGAGCGAATCTTGTTTCTATGATTGTAATTGACTACAAATGAAGTTATTATTTT TGTTTTCTTTTACTGCAGAATGCTATGGTTTTCCAAATTTATGCAGTTCTGTCTAAGGCATTTTGCACATCTGTTTCTTCTAATGACCCTCCTTCGTTGA AGGGTGTTGCCTTAGGAGGAGTTGGAACAAGTGCCTTCCAAAGTCTATTGCTTTCCCCTGTAGAGTTGGTGAAAATTCGCCTTCAACTGCAGAGCACGGG CCAATCTTCGGCATCCGAAAAGGGTCCTGTAAAGGTTGCTAAGAACATATGGAAAAATGAGGGACTTCGCAGAATTTATAGAGGACTAGACATTACTATG CTCAGAGATGCACCTGCATATGGTTTATACTTTATACTTCTGGACTTATGAGTACACTAGAGAAAACTTCACCCAGGTTGCAGAAAAAGTAGTGAAGAAA GCTTGAATACTATGTTAGTAGCAGGAGGATTAGCCGGTTTATCGAGTTGGATTTTCAGCTACCCTTTGGATGTTATAAAGACAAGGTTACAGGCTGAAAC ACCTTGTTCACAGAAATATAAAGGCATTTTGGATTGCCTCAGAAATAGCATCAAAGAAGAAGGATACAATGTGCTATGGAGGGGTTTAGGAACTGCAGTT TCTAGAGCTTTTGTAGTTAATGGTGCTGTGTTTTGTGCTTATGAGATTACTCTAAGGTGTTTGTTTAACAATTCAAGCATCCAAATATAGGATTCAACAA AGGAGCATTACTCTTCCCAATGTTTTTTAGGAGAGACATGATAAAGTATAACAAAAAGGCTTTGATATGAGACAATCATTACTTGATGTGGAAGCCAAAA CAAAAAATTCTTGTTGCTAAAGTGGTAATGTAAAGGGTCAAAACATCCAACAGAGTAAATCCAACATAGATGATTGAAGGTCTTTGTACAACTGATTCTG TTCAATATCACTATAGCTTGCTCCTTTTTTCTTTGATTTCTTTTATTGTCTAAACCATCAACAGTTAGACCCTTCACATTTTGAAGTATTATTGTAATAC AAGTTATTAATGGAAACAGACATTGGCCA BLAST |
Tissue | pods |
Gene name | LI_gene_195071; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479570
Blastp | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 from Arabidopsis with 61.87% of identity |
---|---|
Blastx | Receptor-like serine/threonine-protein kinase SD1-6 from Arabidopsis with 46.56% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT1G67520) |
CantataDB | Link to cantataDB annotations (CNT0001079) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458283.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |