Ll_transcript_480926

• Id Trinity: TRINITY_DN52734_c1_g1_i1
• Name Transcript: Ll_transcript_480926
• Sequence: AAAGGGGTGAAAGCATCTCACAAAATCTCCTTGATGCAATTGAGGAATCTCTTATTGCAATTGTTATAATCTCCAAAAACTATGCTTCTTCAACTTGGTG TTTGGATGAGCTACAAAAAATTGTTGAATGCAAACAAAGTTTGGGATTACATGTATTCCCAATTTTCTATGGTGTTGATCCATCTCATGTACGACATCAA AAGGAAAGTTTTGAACAAGCTTTCAAGGTTCATGAACAAAAATTTGATGAAGACAAAGAGAAGGTGCAAAAATGGAGAGATGTACTAAAAGATGTTGCCA AATTATCTGGTTGGGACTCTAAAAATAAGTAAGTTTTTCATTTATCTTTTGGTATCATACAACATCTACTTACTCTAGTTGAGATTCTTTTTTTTATTTA ATTTAGTTTTCATACACAATTCTTCTTTGAATAACAGATCCAATTCTAGCATACAGATTTTAAACTTTAAATTCAAACTTATGAATTAGTTGACACTAGA AAGTTAATTAAAAATGCTTCATTTCTTTTATTTTGTTAGATAAATTCACCATGACATTTATATGCCATATTCTGAACTCAAATATATTTAAAAACAAAAT TCATTAAGACCCATATTAGTTTTGTCATTGTTTTGTTGATTTGATCGTTTTCTTTAGGCATGAGTCAAAACTGATTGAAGAAATAGTTGAACAAGTATGG AAAAAGCTGGAACCCAAGTTGGCAATAAATACTGATGGATTGATTTCAATAAAAACAAAAGTAAATGATTTGATTTCACATTTAAGGTTGGAGTTGCAAG ATACTCACCTTATAGGAATATGGGGTATGGGCGGAATTGGAAAAACAACACTAGCTGATGTTGTTTACAACAGAATCAAAAGCAAATTTGATTTTAGTTG TTTTCTTCCCAATGTCCGAGAGGCTTATAATGAAGGGGATCAGGGTCTGGTCAAATTACAAGATAAACTTCTTTCCCAGTATAAACCAAAGAGCATGGTA ATTGATACTGCTCGACAAGGAAAAGACATGATAAAAAACTTTCTGCACAACAAAAAAGTTCTTCTGGTACTTGATGATGTGAATGCTGAAATTCAACTAG AACATTTGGCTGGAAACCAAAACTGGTTTGGTGGAGGGAGTAGAATAATAGTGACAACAAGGGATAAACACTTGTTGACTTCACATGGATTATTGTTTGC TGTATATGAGATGAGACTCTTAAATAATCAAGAGTCTCTTCTTCTCTTTTGTGAAAAAGCATTTAATGGAAATCAACCATTAACTGAATATTTGGAGTTG TCTAAAAAAGTAGTTGAATACAGTGGAGGGCTTCCTCTAGCACTTAAAGTTTATGGTTCATTACTTCATGGAAGAAGTATACAAGAATGGGAAGACACTT TGATTAAGATAAGTCGTGTTCCACTTGATGATATCCTTAACAAGCTTAAAATAAGTTATGATATGTTGGAAGATGAGTACAAGACTATATTTTTGAGTAT TGCATGTTTCTTCAATGGATGTGATAAAGAACATGCGACAAGAATATTAGATAACTGTGGTCTGCATCCAAAAATGGGAATAAATGTTCTTATTGAAAAA TCATTGATAGCTTGTGATGCAATACGTGTTCTACGAATACATGATTTGCTTCAGGAAATGGGTCAAAAAATTGTTATCCAAGAATCTCCTCTTGATCCTG GTAGACGTCAATGGTTGTGGTCTCTTGAGGATATTGATAAAGTTTTAAGAACAAATACAGGAACTGAAAAAGTCCAAGGAATTGTTTTCAACCGAAGAGT GCAATATGATGCATGTTGGCTACCTGATGCATTCTCTAAAATGTGTAACATTAGATTACTCATTATAAATTGTGATTTGCACCTTCAG
• Tissue: pods
• Gene name: LI_gene_195141;
• Additional information: details;

Expression of Ll_transcript_480926

FPKM

• PAB: 0.5
• PNAB: 2.9
• PS1: 0.4
• PS2: 0.1
• PS3: 0.2
• PW1: 2.9
• PW2: 3.3
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480926

• Blastp: TMV resistance protein N from Nicotiana with 40.18% of identity
• Blastx: TMV resistance protein N from Nicotiana with 37.86% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452279.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;