| Id Trinity | TRINITY_DN52734_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_480938 |
| Sequence | AAAGGGGTGAAAGCATCTCACAAAATCTCCTTGATGCAATTGAGGAATCTCTTATTGCAATTGTTATAATCTCCAAAAACTATGCTTCTTCAACTTGGTG TTTGGATGAGCTACAAAAAATTGTTGAATGCAAACAAAGTTTGGGATTACATGTATTCCCAATTTTCTATGGTGTTGATCCATCTCATGTACGACATCAA AAGGAAAGTTTTGAACAAGCTTTCAAGGTTCATGAACAAAAATTTGATGAAGACAAAGAGAAGGTGCAAAAATGGAGAGATGTACTAAAAGATGTTGCCA AATTATCTGGTTGGGACTCTAAAAATAAGTAAGTTTTTCATTTATCTTTTGGTATCATACAACATCTACTTACTCTAGTTGAGATTCTTTTTTTTATTTA ATTTAGTTTTCATACACAATTCTTCTTTGAATAACAGATCCAATTCTAGCATACAGATTTTAAACTTTAAATTCAAACTTATGAATTAGTTGACACTAGA AAGTTAATTAAAAATGCTTCATTTCTTTTATTTTGTTAGATAAATTCACCATGACATTTATATGCCATATTCTGAACTCAAATATATTTAAAAACAAAAT TCATTAAGACCCATATTAGTTTTGTCATTGTTTTGTTGATTTGATCGTTTTCTTTAGGCATGAGTCAAAACTGATTGAAGAAATAGTTGAACAAGTATGG AAAAAGCTGGAACCCAAGTTGGCAATAAATACTGATGGATTGATTTCAATAAAAACAAAAGTAAATGATTTGATTTCACATTTAAGGTTGGAGTTGCAAG ATACTCACCTTATAGGAATATGGGGTATGGGCGGAATTGGAAAAACAACACTAGCTGATGTTGTTTACAACAGAATCAAAAGCAAATTTGATTTTAGTTG TTTTCTTCCCAATGTCCGAGAGGCTTATAATGAAGGGGATCAGGGTCTGGTCAAATTACAAGATAAACTTCTTTCACAGTTCAAACCAAAGAGCATGATA ATTGACACTGCAAGACAAGGAAAAGACATGATAAAAAACTTTCTGCACAACAAAAAATTTCTTCTGGTACTCGATGATGTGAATGCTGAAATTCAACTGG AACATTTGGCCGGAAACCAAAACTGGTTTGGTGGAGGGAGTAGAATAATAGTGACAACAAGGGATAAACACTTGTTGACTTCACATGGATTATTGTTTGC TGTATATGAGATGAGACTCTTAAATAATCAAGAGTCTCTTCTTCTCTTTTGTGAAAAAGCATTTAATGGAAATCAACCATTAACTGAATATTTGGAGTTG TCTAAAAAAGTAGTTGAATACAGTGGAGGGCTTCCTCTAGCACTTAAAGTTTATGGTTCATTACTTCATGGAAGAAGTATACAAGAATGGGAAGACACTT TGATTAAGATATGTCATGTTCCACTTGATGATATCCTCAACAAGCTTAAAATAAGTTATGATATGTTGGAAGATGAGTACAAGACTATATTTTTGTGTAT AGCTTGTTTCTTTAATGGGTGGCCAAAAAAGGAAGTCAAACTAATATTGGAAAATTGTGGCATGCATCCATTAATAGGAATAAATGTTCTTATGGAAAAA TCATTGATAGCTTGTGATGCAAAACTTGTTCTACGAATGCATGATTTGCTTCAGGAAATGGGCCAAAAAATTGTTACCCAAAAATCTCCTCTTGATCCTG GTAGACGTCAATGGTTGTGGTCTCTTGAGGATATTGATAAAGTTTTAAGAACAAATACAGTAAGTATATATTTTCGTTTTTAATTAAGATGAATTGATTT GCTGAAATGTATCTCATATATATATTATGTTAATTTTCATTCTTTTATATTAGGGAACTGAAAAAGTCCAAGGAATTGTTTTGAATGAAAGAGTGCAATA TGATGCATGTTGGCTACCCGATGCATTCTCTAAAATGTGCAACATTAGATTACTCATCATAATGTGTGATTTGCACCTTCAGATTGGTATCAAATGTCTT TCTAGTTCGTTAAAAGTTGTTATTTGGGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_195141; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_480938
| Blastp | TMV resistance protein N from Nicotiana with 40.25% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 38.07% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452279.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |