Ll_transcript_480930

• Id Trinity: TRINITY_DN52734_c1_g1_i5
• Name Transcript: Ll_transcript_480930
• Sequence: AAAGGGGTGAAAGCATCTCACAAAATCTCCTTGATGCAATTGAGGAATCTCTTATTGCAATTGTTATAATCTCCAAAAACTATGCTTCTTCAACTTGGTG TTTGGATGAGCTACAAAAAATTGTTGAATGCAAACAAAGTTTGGGATTACATGTATTCCCAATTTTCTATGGTGTTGATCCATCTCATGTACGACATCAA AAGGAAAGTTTTGAACAAGCTTTCAAGGTTCATGAACAAAAATTTGATGAAGACAAAGAGAAGGTGCAAAAATGGAGAGATGTACTAAAAGATGTTGCCA AATTATCTGGTTGGGACTCTAAAAATAAGTAAGTTTTTCATTTATCTTTTGGTATCATACAACATCTACTTACTCTAGTTGAGATTCTTTTTTTTATTTA ATTTAGTTTTCATACACAATTCTTCTTTGAATAACAGATCCAATTCTAGCATACAGATTTTAAACTTTAAATTCAAACTTATGAATTAGTTGACACTAGA AAGTTAATTAAAAATGCTTCATTTCTTTTATTTTGTTAGATAAATTCACCATGACATTTATATGCCATATTCTGAACTCAAATATATTTAAAAACAAAAT TCATTAAGACCCATATTAGTTTTGTCATTGTTTTGTTGATTTGATCGTTTTCTTTAGGCATGAGTCAAAACTGATTGAAGAAATAGTTGAACAAGTATGG AAAAAGCTGGAACCCAAGTTGGCAATAAATACTGATGGATTGATTTCAATAAAAACAAAAGTAAATGATTTGATTTCACATTTAAGGTTGGAGTTGCAAG ATACTCACCTTATAGGAATATGGGGGATGGGTGGAATTGGAAAAACAACGTCTGATGTTGTTTACAACAAAATCAAAAGTAAATTTGATTTTAGTTGCTT TCTTCCCAATGTTAGAGCGGCTTCTAATGAAGGAGATCAAGGACTGGTTAGATTACAAGATAAACTTATTTCAAGGTTGAAACCAATGAGCATGATAATT GACACTTTAAGACAAGGAAAGTACATGATAAAAAACTTTCTACAGAACAAAAAAGTTCTTCTAGTACTCGATGATGTGAATGCTGAAATTCAACTGGAAC ATTTGGCTGGAAATCAAAACTGGTTTGGTGGAGGGAGTAGAATAATAGTGACAACCAGGGATAAACACTTGTTGACTTCACATGAATTATTGCTTGCTGT ATATGAGATGAGACTCTTAAATAATCAAGAGTCTCTTCTTCTCTTTTGTGAAAAAGCGTTTAATGGAAATCAACCATTAACTGAATATTTGGAGTTGTCT AAAAAAGTAGTTGAATACAGTGGAGGGCTTCCTCTAGCACTTAAAGTTTATGGTTCATTACTTCATGGAAGAAGTATACAAGAATGGGAAGACACTTTGA TTAAGATATGTCATGTTCCACTTGATGATATCCTCAACAAGCTTAAAATAAGTTATGATATGTTGGAAGATGAGTACAAGACTATATTTTTGTGTATAGC TTGTTTCTTTAATGGGTGGCCAAAAAAGGAAGTCAAACTAATATTGGAAAATTGTGGCATGCATCCATTAATAGGAATAAATGTTCTTATGGAAAAATCA TTGATAGCTTGTGATGCAAAACTTGTTCTACGAATGCATGATTTGCTTCAGGAAATGGGCCAAAAAATTGTTACCCAAAAATCTCCTCTTGATCCTGGTA GACGTCAATGGTTGTGGTCTCTTGAGGATATTGATAAAGTTTTAAGAACAAATACAGGAACTGAAAAAGTCCAAGGAATTGTTTTCAACCGAAGAGTGCA ATATGATGCATGTTGGCTACCTGATGCATTCTCTAAAATGTGTAACATTAGATTACTCATTATAAATTGTGATTTGCACCTTCAG
• Tissue: pods
• Gene name: LI_gene_195141;
• Additional information: details;

Expression of Ll_transcript_480930

FPKM

• PAB: 1.2
• PNAB: 3.8
• PS1: 0.6
• PS2: 0.5
• PS3: 0.4
• PW1: 7.1
• PW2: 6.8
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480930

• Blastp: TMV resistance protein N from Nicotiana with 40.18% of identity
• Blastx: TMV resistance protein N from Nicotiana with 38.06% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452279.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;