Ll_transcript_480549

• Id Trinity: TRINITY_DN52737_c1_g1_i11
• Name Transcript: Ll_transcript_480549
• Sequence: GACAAGAAGCTAAGCAAAACCAAAATGAGGCAATTTCAGCAGCACAAGAAAGATATGAGAGAGCAAAACAAGCAGCAAATGAGACTCTAAGCAACACAAC ACAAACCACACAAGAGAAAGCATCACAAGCAAAGGACATTGCATTGGAGAAGGGTCAACAAGGTTATGGTCCTACCAAAGACACCATCACTCAAGCAAAG CATGCAACAACTCAAAAGGGTCAACAAGGTTATGCTACCACCAAAGACATTATCACCGGTGTGGCAATAACTACCGTTGAATACACAGTTCAGTGGCTGA AAAGACCAACGATTACACAATTCAAGCAGCTGTGAAGACCAAGGTTGTGACACTGGAAACTAGGAGGGTGCTGCTCAGGTTGATGGGAAAATGGCTGTGG ACTTGAAGGAAAAGGTCAAAGTGGCAGGTTGGACTGTGGCGCATTACTCAACCCATTTGACAGTTGATGGTACCAAGGTTGCTGCCAATGTGGTTGAGGA AGTAGTCGGGTATGCTGGCCATAAGGATATGCCTAGCTTGGTGCGAAATCGGTGGGTGTTGTTAAAGGATTGGCTGATATTGTTGGTGAGACTGCTAAGG AGTATACTGCAAGGAAGAAATAGGAGGCAAGACTGGAATTGGAGGCCAAAAGATAAGCTCAACCCCAGGTTCTATATATATGATCACTTTGTGGCTGTGT TCTTAATTACTTATTTTTAATGCCTAATGAAACTGAATTAAGAATGAAGTTCAATTAAACTGATTTAGTTATTAGGTTTGATTTATTGCTAATATCATAT ACTATCATTTGCATGTTTTGTAACATAGGAGTGAAATCTTATTATTTCTAATTCATCATCGATCCAAACATTTGTAAACATGTCATATTAGTGGGAATTA ACCTATGTTAAGCGTGTTACTTTGTTACGATGACTTTTGATGGAATTTCTTTTCAATGCAACACTTTATATGTGGCTTTATGCTAAATATAAGAATGCAT TTTTATTATCTGTATTTCTCAACGTCTATTTCCTTTGAAATGGGAATGCTCAGCATCTTTTTTGTTGCTTCCAAGTTAAACTATTCCCAACAAGTGCGGA TAGATGGAAATGAAAAATCTTGCATATATAGAGGTTCTATAAGCTAAAAAGGTAGGTTCTATTTGTTGCAATAGTGGCTGTGATTTATTATATATGAATT GAAAGAAATAAATGACCCTCGGGGTAAAGCAAGAATTGCAGAAAATGTTTTCAAACAAATTAAACAAGAATCTGCAAAAGCAAGTTGACAAACACAGAGG CAGACTGACAGAGTACTTTCAACATGGTGAGATTATAGTTAAAAATTAATATTGTCAATACAATGATGTTGTTCAAGTTTATAGGAGACTCTGAGAAGGT AACAGCTCTTGCAATATCCCTAAATGAGTTGATGTATATACTGGGTCTTCTTTCATTGACTGTATGTAATTAATATTCACCAAAAAAATATAATTGATGT AACGTAAAATTTATAGTTAGTGTCATTTTATACTGAAAGCATTTTTATCATTGTCTTTTTCACTCTTTATATTTACCATAATTATGGATGCAGATAAAAG GTAGAAGGGAGAAAAGTATGAGATAATGGTTATTATATTGAGTTGGGTTTGGTTAATACTTCATACCTACATCTTTTCACAATAGAGGCATCATTGAGGT TAAGGGCTTACAACCATATAAAAAATCTACCTAATTTATCTATTCATATTGAGCTGTATTTGGTTATAATATTGTGTACTGAAATCTTGCCACAACACAG CCATGGAAAAGGTTAAAGGCTTAATGTTATGTAATATACTTCTATTCTATCTACTGTTATATGCTAATATATTATGAATATTCTTTACACAGATAGATAA TAGATTCATGTATGAATAGTACACCTCATAAACAATAGGAAAGCGGGTTGACAGACACTTGCCTGTCAACACACTAGTTACAAATAATAAAAAAACTATA TTTCATATTTATAATATATGGATTACACATTATAAACCATAGGAGAGCGACACGCTAGTATATAATTATATTAGAAGTGTGTAAGAAGACTAGGCAGTGC CTATACTACCCCCTCTCCTATCGTTTATGATGAAATCCATATATTATAAATATGAAATATAGTTTTTTTTGTTATATTTGTAATATGCACTTGATAGTAT TTCAACTGTATTAAAATACCAATATATACCAAGTATGTTTTCATTTTGAAGCATAAATGGGAACACAATATGCTGTGATACAACAGATGAAAGAAAGTGT ACTTGCAAAAATAATTACCAAGCAATTATCATGTTGGGTTGTGCATGAAACATCCATAGATAAAGAAATATTATGATGATCAGTGTCACTGCTGAGATCC ACTTTATCCAATAAAAGTACTATAATTAATATTGGTACATTTACTGATACAATGACTGAATCACTTGCACGTTTCTCAGTTTCTGCTTCTTTTGTTTTTC CAATTGCTAAGCTTTTTCTGTTGTGTAGAACTTGAGAAACATACCCTTTTCTTTAGAATCTGTTTTGTATTATTTTTTGTACTCTTGAGTCTTGGCCTCT TTCCTCTTATTCCCTTATTACACTGCCAACTACAAAGTCACACAAGAACAACAAAGTTGGGAAAGTGAAAACAAACATCATGGCTGGAAACAAGTTTGCA ACCATGTTGCATAGGAACACCAACAATATGGTTGTGATTCTAGTGTATGCACTTCTTGAATGGGTCTTGATAGTGCTCCTGCTTTTTAACTCTTTGTTCA GTTATCTTATCACAAAATTTGCCGAATCGGTTGGCCTCAAACCACCATGCTTTTGGTGTTCAAGGGTTGATCATGTCCTGCAGCCAGGAAAAAGCACAAA TTTACACAAGGGTCTTCTGTGTGGGACTCATGCAGCTGAGATTTCCAAGCTTGGTTACTGCTCAAATCATCGAAGGCTCGCGGAGACAGAAAGCATGTGT GTGGATTGCTTGGCCTCTATGCCAAATCATCATGAAAACTCCTTCGGAATGAGACACAAGATTTCTTTTGTCTCATGGGAGAGTCATGAAAATGGTGAGA GTAAGAATATAAAAAAGTGCTCTTGCTGCAATGAGAGTTTGAGCAACCAGATTTACCCACCTTATTTGTTAATGAATCCTTCTTGGGGGGATGAGAACTT TACAAGCAAAGGGTCTCGAATTGTAGAATCATTAGATGATGACAAAGAAGGTGATAGAGAGAAAAACGGAGAGGATCATGATCATGAAGATGAAGGGATA AGAGATGAGCATCAAACATTTTCTGATATCGAGAGTTTTATCCTTAGAGAGGTGGCAGAGGATCGTTCAAGTTCTTTTTCGAACTTGCATTCTGATGGAA AGGATGCAGAAAAAGAAGATAAAGAAGATGATCTTATCATCACAGAACTGGATCCAAGTGGTGCTGACAATTTTATTCATCAATTTGCTGATACTTCGAT TACGCAGGCTTCATTGTTGGAGGATAGATCACTTGAACTCATGAATATGTATTTTGAGGATTATGTAGCTTGTGATACTCGCCGTTTGATACCTGTAAAG TTAATAGATTCCATTACCTCTTTGAATTTTGAATCATCATGCAAATTAGACGAGGATCTCGGGGAGAATGAGCAAAAGATTCATACTTTTGATATCGAGT CACCAATTGAAGCACAATTAAGTATTTTAGAAGAGGCATCATTGCTCACAATGGATAACAATGGCGAGAAAACAAGCATGAGAGAAATTGAAAGCTTGGC GAATTTTATAGTTTTTGATTTTGAAGAGTTAAAGCAGAATTCACTACTTGAGGTGCAGACACAAAGGATTACTTCTGATGAAGCTCAAACTTTTCCGAAC GAGGACAACAATGTTGACGCAGCCTCAGAAGAACAAGATAATAAACAAGTCGATCTGCCTCGGTCTCAAGAGCTGGTCTACCTTTATGAAAGCACACAAG AAGATGGATCTTCATCAAGTGGTGATGATGCTGAAATCCAAAATGCCTTTGGTGAATTCATTGCTCAGAATAATCTAAGTGAGTCTGAAAGTTTATCCAA TGATGACAACAATGTAGATACATCCACGGAAGAACCAAATAACACGGCAGGAGGTACAAGTATATGATTTGTAGAATTCATGAACCCTTATCCATGCACA ATTGTGTTGGCTGATGTTTCCTATTGCTTTTTATTTAAGTCAGTTCATCAAACTAAAAGGCATATTATGGCTCTACTGAATGATCTGTCTACTTCAAAAA TCACATTTTTTGGCCATGCAGTCGATCTGTCTCTATCTCAAGAACCGGTCGGCTTATGTGATTGCACAGACGAAGATGAATCTTCAACAAGTGATGATGA TGATGATATTGAAGTTCAAAATGCTTTTAATGAATTCATTGCTCAGAATAATCTCAACAACTCTCCAATTTTATCTAATGGGGACAACAATGTAGAATCA GCCACTGAAAAACCAGATTACACACCACAAGGTACAATGAAAAGTACATGAATTATAAGAGTGGACACTGCAATAGCTACAAGTACATGAAAAGTACATG AATTCTAAGTGCTACATATCAAGAGCTAGAAGAAGAGAGAAGTGCCTCTGCAATAGCTACAAACCAGACAATGGCAATGATCACAAGGCTTCAAGAGGAA AAGGCGACAATGCAGATGGAAGCGTTGCAATACCAGAGAATGATGGAAGAGCAAGCAGAATATGACCAGGAGGCTTTACAGTTTTTGAACGAGTTAATGG TAAAAAGAGAGAAAGAGAAGCAAGAACTCGAGAAGGAA
• Tissue: pods
• Gene name: LI_gene_195159;
• Additional information: details;

Expression of Ll_transcript_480549

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.3
• PS2: 0.5
• PS3: 0.4
• PW1: 0.3
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480549

• Blastp: Myosin-binding protein 3 from Arabidopsis with 36.19% of identity
• Blastx: Seed biotin-containing protein SBP65 from Pisum with 52.83% of identity
• Eggnog: Pfam:DUF593(ENOG410YA8U)
• Kegg: Link to kegg annotations (AT5G16720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432817.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;