| Id Trinity | TRINITY_DN52737_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_480534 |
| Sequence | ATAAAAAAGATTAATGTTATGATCTGTATTGCTGCCATACTTGATCCTCGAAACAAGTTTCATTTGGTTAAGTGGGGCTTGGAGAGGATTCATAATAAAG ATGATGCCATAGTTTTATGTGAAAAGATAAAGGATATGTTATACAAGATGTTTGATAAGTATAGGTTGTTCCTTAGTGAAGGCCAAGAAAATTCTTCACA AACCACTCATGAAATTGAAATGTTAGACTCTAATGCATCCAATGAAGTTTCAGTCGCTATGGTATTTAAGAAATATATGAATCTTCATGAGACAATGAAT AAAAATGAGGTAGATTTGTATCTCAAGGAGGGTTTGGAGAAGAAAATTCCAAATTTTGATATATTAAATTAGTGAAAGGTGAACTCCATGAAATATCCGA TTTTCTTGCACAAATAGCTAGAGATTTATTGGCCATGCCTATGTCGATAGTCGCTTCAGAGTTTGATTTTAGCACAGGAGGTAGAGTTCTTAATTGTTAT AGGAGCTCCCTTTCTCCCAAAATAGTTGAAGCTTTAGTATGTTCACAAAACTGGTTTCGGTTCTCTTCAATTGCAACTGATGTTGAAGAGTTATTGGAAG ATTTAGAAAAGTTTGAGAAAGAACTTGAACCAATCCCACAACCAAATGAAGAAGATTGTGATGATGATCAGGTGTTCATATTGTTGTTGTCTTGATGTTA TTGTTGTTAGCCTGTTATTGCTAATGCTCTGTTAGAAATTGATGTTGTTGTATTACAAATTGTTGTTGTTGTGTTATAAATTGCTGCTGTTGTGTTACAA ATTGTTACTGATGTGTTACAAATTCTTATATCACTCTGCTATGTATTTGAATTTCTGCTATATCACTCTTGCTGCTGGTCTGCTGCTATATCGCAGAAAA AATGTAACTCAAGATTTATCCATAACCACTAAGCAAAATACATTCAAAATTTATGAAAGTTTCTGTTTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_195160; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_480534
| Blastp | - |
|---|---|
| Blastx | Zinc finger BED domain-containing protein RICESLEEPER 1 from Oryza sativa with 51.79% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020992218.1) |
| Pfam | Domain of unknown function (DUF4413) (PF14372.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |