Ll_transcript_480540

• Id Trinity: TRINITY_DN52737_c1_g2_i2
• Name Transcript: Ll_transcript_480540
• Sequence: TGAAATTGAAATGTTAGACTCTTATACACTGAATGAAGTTTCAGTTGCTATGGAATATGAGAAAGACATGAATCTTCATGAGACAATGAATAAAAAATGA GGTAGATTTATATCTCATGGAGGGTTTGGAGAAGAAAAGTCCAAATTTTGATATATTTAATTGGTGGAAGATGAACTCCACGAAATATCTGATTCTTGTG CAAATAGCTAGAGATGTATTGGCCATGTCTGTGTCGACAGTCGCTTCAGAGTCTACTTTTAGCAAAGGAGGTAGAGTTCTTAATTGTTATAGGAGCTCCC TTTCTCCCAAAATAGTTGAAGCTTTAGTATGTTCACAAAACTGGTTTCGGTTCTCTTCAATTGCAACTGATGTTGAAGAGTTATTGGAAGATTTAGAAAA GTTTGAGAAAGAACTTGAACCAATCCCACAACCAAATGAAGAAGATTGTGATGATGATCAGGTGTTCATATTGTTGTTGTCTTGATGTTATTGTTGTTAG CCTGTTATTGCTAATGCTCTGTTAGAAATTGATGTTGTTGTATTACAAATTGTTGTTGTTGTGTTATAAATTGCTGCTGTTGTGTTACAAATTGTTACTG ATGTGTTACAAATTCTTATATCACTCTGCTATGTATTTGAATTTCTGCTATATCACTCTTGCTGCTGGTCTGCTGCTATATCGCAGAAAAAATGTAACTC AAGATTTATCCATAACCACTAAGCAAAATACATTCAAAATTTATGAAAGTTTCTGTTTTTG
• Tissue: pods
• Gene name: LI_gene_195160;
• Additional information: details;

Expression of Ll_transcript_480540

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0
• PS2: 0.3
• PS3: 0.7
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480540

• Blastp: Putative AC transposase from Zea with 46.15% of identity
• Blastx: Putative AC transposase from Zea with 57.83% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020992218.1)
• Pfam: hAT family C-terminal dimerisation region (PF05699.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;