Ll_transcript_481382

• Id Trinity: TRINITY_DN52741_c2_g3_i3
• Name Transcript: Ll_transcript_481382
• Sequence: GAAAAGAACAGAAAAGAAAAAGAATAGAAAAAAGAAAAAGTGAGGGTATGAATAATGAACTATGAAGGAAGAACTGTTGTTCGTTTTTGATGAAAACCTC CTCATCCATTATAAAGGGAACCTTCTTCGTACTTCTGCTCTTTCCCCTTTTCAATCTAATCTCATTTCTTCCCATTTTCTAAACTTTTCTAATTTCTCTC CCCCTTCTTTCTTTCACTCTTTCTTCTTCTCTAATCTTGAGTTATTCAAACAAAGACTTCACCTTTTACTTCAAAACACAAAGTAAAACACATTTTCTAT CAAGGGTCTTCTTTGTTTTTTGATCTTAACTGTAATGCTTGAATCTCTTCTTCAAGATTTAGGCATCGGTTAATTTTGTTTGTGGAGTTATTATCATTTT ATATAAAAATAATTCTAGTACTTTGTCGTGAGTTGAGTCTAGTTGTTAGTTTTGGAAGGATTTTCGGTGTAAATAAGGTTAGATCGGTCAAAATACTAGA TTTTTGGGTTTAGTCTCCTCCTCTGATATTATTTGATTCCCAGGAGGATTTGCATTAACTAAAAACGAAAACAGAAAGAAAAAAACAGGAAATTAATTTA TAGTTTGTTTAAAAATCAAATCCCAAAATTTTATTGTGGGTTTTACCAAATACTCTGCACTTGATCTTGTATTTTTAGACAATTTTTGTGATCAGTATTT TGGTAGGTGCCAAAGGATATAACTTTCTAGACAATTTGATTTGTCGAGTGTTTTTCCAAATACTTCGCACTTGGTTTCATTTGATTTTGTGAAAGAATTT TGTTCATATCATAATGTTGAAATTTAGGTAGAGGAAAGTAAGACCCTTTTTGTGTGTGTTGGGTTCTCTGTTTTGGGTTATTACATCTTATATGGGAATA CCTGATAATTCATCACTAGATCTAATAGAAAAGATTAGGTCTTGGGTTTCTCAGGGAGTAAGTGATTTATCTTGTGTATGTGAGAAATTTGATATGCACA AAAGTGGTTGCAAAATGTGTTGTCAGTGCAATAAGAACATGGATGAGTTGCTGACTCAGCACAAATACAATTGCAAAGGTTGCGGTCGTTGGATTTGTGG AGAGTGTATAAGAGGTTGTGGCCTTGTTCCAAATATTGGTTCTGATAACAATACTGGAATCAAGGAAATAATTAGTTGCAAGTTCTGTTCAGATGATGCT ACTAGGAAGAGTTGTGAGAAAGTGCACCCTTCAGCTTCTCCACAAGAGAGTCCAAGACAATTTTCCGAACCACCTTCACCCTGTTTTGGTGTTGAAAGTG AAAGAATTAGTTCTCCACAGAATAGTGAATTGAGTCAGGGAAATCACTTTAAAAGCTATTTTCAATACCAAGATTGTGGTACTCACGCTTCTTCATTATC TACTCATCCATCTACCTTCAGGACTGACGAAAAAGGGATGGAGGATTCTGGGAAGCAATTTCTCAACCCATCACGTACATTTTGTAACAACTATTCAGAT AAAGATTTAAGTAGCATTAGTGCTAGACATGACATCTATAACTATAATTCTGTGGGGTCATGTCCTTCAGAGAGCTCCTCTAGGATTGGTTTTACTTCTA GCAGGTTGGAGCAGCTCCCTGTACAGAAGGGGCAAGAGAAAAGCCCCACCTCTCAGTATAATGCTCCCATTGGTCAACAAAGTGTGGCAGTTTTAAGTAA GCCTGAACCAGGGATTGAGGATGCATATAATACTGCTTACTTATCCGATGACTTGTCAATTTTCCAGAACCAGAATCAGAATTCACAGAGACCATTGGAT TTTGAAAACAATGGTCTTATCTGGTTCCCCCCACCGCCTGACAATGAAAACGATGATGCAGATGGTAATTTCTTTGCGTATGATGATGAAGATGATGATA TTGGCGACTCGGGTGTTTTTTCCTCATCCACTAGTCTATCTGATATGTTTCCTGCTAAGGAGAAGCATGATGAGGAAAGCAAAGAACCTTTAGAAGCTGC TATACATGGGCATTTTAGAGCTCTAGTTTCACAACTTTTGGAGGGAGAGGGAATTAAAGTTGGTAAGGAAAGTGATTCTGAAGACTGGCTTGATGTAGTT GCAACACTGGCTTGGCAGGCTGCTAACTTTGTGAGACCAGATACAAGCAAAGGAGGCAGTATGGATCCTGGTGATTATGTTAAGGTCAAATGTATAGCAT GTGGAAGCCCAAGTGAGAGCACACTTATCAAAGGAGTAGTTTGTACAAAAAATATTAAGCATAAGCGCATGACCTCTCAATACAAAAAGACTAGACTACT CCTCCTAGGAGGAGCACTGGAATATCAAAAGGTTCCAAACCAACTGGCTTCTTTTAATACATTGTTACAGCAGGAAAATGATCACCTGAAGATGATCGTT TCAAAAATTGAAGCTCTTCGCCCAAATGTTCTTCTGGTAGAAAAAAGCGTAGCTCCATATGCCCAGGAATATTTGCTGGCGAAGGAGATCTCTTTGGTAT TGAATGTTAAAAGGCCTCTGCTAGAGCGTATAGCTCGATGCACTGGTGCTATCATCACTCCATCAGTGGATGATTTATCTAAAGCACGCGTGGGGCACTG CGAATTGTTCCGTTTAGAAAGAATTGTAGAAGATCATGAGTCTGCTATTCATTTGAACAGAAAGCCCAAAACATTAATGTTTTTTGAAGGTTGTCCTCGG CGTTTGGGTTGCACGGTCTTACTAAAGGGAACATGCCGTGAAGATTTAAAGAAAATTAAGCATGTCGTGCAATTTGCAATTTTTGCAGCCTATCATTTAT CTCTCGAGACCTCATTCCTTGCTGATGAAGGTGCTACCATACCTAAAATGATAATAAAACAGTCAACTCATTTGCCAGAGAGCGCAACTGCTGATACTGC TTTAAAGCTTGGAACTTCGCGATCAGCACAAGAGCATCATTATGAACCTAGTTTAAACTCACATACAGGCACCATGGTGGATTATAGGGTTGAGAATGTA CTCTCTGACTCAAACTACAATAATTTAACTTCTGATTTAAATGTAGAACCAAATTATTTGAATCAGTGCATTGAATCAGAGGGGGACACTATATCTAATA TGAGAGACCTTTTGCCACCAGAGTTGCAAGAAGCCATGGTTGAAGAGGAGAGAGGTTTTGGTGAAGTTTCTGAGCCAATGAAAGACAAGATCAACGAGGA TGATTTTTCTGGTGAATACTTTTCCGCCACTGATGGTCATCAGAGCATACTGGTGTACTTTTCTAGTCACTGTGTGTCAAAAGCAGCTGTATGTGAACGG ACTAGATTGCTGCGCATAAAGTTTTATGGTTCTTTTGATAAGCCACTTGGGAGATATCTTCGTGATGATCTGTTTGATGAGACATCTTACTGTCAGTCTT GTAAAGAGCCAGCGGAGGCTCATATCCTTTGTTTTATGCATCAGCAAGGGAATCTTACAATCAATGTTCAGCGTCTTCCTTCTGTGAAGTTACCAGGGGA AAGGGATGGAAAGATTTGGATGTGGCATCGATGTCTGAGGTGTCCTCATGTGGATGGAGTGCCACCAGCAACTCGGAGAGTCGTTATGTCAGATGCTGCC TGGGGATTGTCTTTTGGGAAGTTCTTGGAACTTAGCTTTTCAAACCATGCAACTGCTAATCGAGTTGCAAGCTGTGGACATTCTTTGCAGAGGGACTGCC TTCGTTTCTATGGGTTTGGGAGTACGGTAGCTTTCTTC
• Tissue: pods
• Gene name: LI_gene_195193;
• Additional information: details;

Expression of Ll_transcript_481382

FPKM

• PAB: 1.3
• PNAB: 7
• PS1: 10.4
• PS2: 5.6
• PS3: 7.6
• PW1: 14.8
• PW2: 10.8
• PW3: 8.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_481382

• Blastp: Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C from Arabidopsis with 51% of identity
• Blastx: Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C from Arabidopsis with 50.7% of identity
• Eggnog: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity)(COG0459)
• Kegg: Link to kegg annotations (AT1G71010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432380.1)
• Pfam: TCP-1/cpn60 chaperonin family (PF00118.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;