Ll_transcript_480192

• Id Trinity: TRINITY_DN52752_c0_g5_i1
• Name Transcript: Ll_transcript_480192
• Sequence: CGGAATGTGATATGTGTTAACCCGAGCTCGTTTGGGTAGCCAGTTTTGTCGACAAATGTAGAGTGCACTCAAAGGGTTCCTCCTCTCCACCCTATTTCCA ATTCTCCACGATGCCCTGTCCCACACACATCCTCCACCACAGCCTCCGCCTCCGCCTCCGCCCATTCTCCACCTCTGTCTCCGCCGCCATCGCCGCCACT ACCTCTCCTGCTCCCGACCCCACCCTCCTCAAATCCTACACCGTCACTCCCCCCATCAAACCCTGGCCCCACCGCCTCACCCCAAACCTCCTCTCCTCCC TCATTTCCCGCCAACACGACCCAAATCTCTCTCTCCAAATCTTCCTCTTCGCCCAGAACCACCACCCTGGCTTCTCCCACAACCCCCGAACCTTCCACGC CATCTTCCTCAAACTCTCACGCGCCCGCGCGTTTGACCTAATCGAGACTCTCTTATCCCACTCGCGCGAATCACGCGCTGTTAGTTGCATCGACGAGGAC CACTTTGTGACCATTATTCGTGGTTATGGCCTCGCTGGGAAGCCTGAGTTGGCGCTCAGAGCCTTTAAGAGGATCGAATCTTTCGGGATTCGACCCTCTG TTAGGTCTCTGAACGCCCTACTGAACGCTTTGGTTCAGAGTAAGCGATACGATTTAGTGCATTCGGTTTTTAGGAATTGTAAGAGTGTGTATGGTGTTGT GCCTAATGTTGTTAGTTGTAATATTTTGCTTAAGGCGCTTTGCGAGAGGAGTGATGTTGATGCTGGTATTAGGGTTTTGGATGAGATGGTTTCGATGGGT ATCGTGCCGAATGTTGTAAGTTATACAACAATTTTGGGAGGGTATGTAAGGAAAGGTGATATAAATGGTGCAAAGAGGGTTTTTTCCGAGATTTTGGATA AAGGGTGGGTTCCTGATGCGACTGCTTACACGGTTTTGATGAGTGGGTTTTGTAGGAATGGGAAGTTGGAGGATGCAATTAAGGTGATGGATGAGATGGA GGAGAATGGTGTTGAGCCTAATGAAGTGACTTATAGTGTTATGATTCAGGCTTATTGCGAGGGGATGAAGTCGGGGGAGGCAGTTAACTTGCTCGATGAT ATGATTGAAAAGGGTTGTATCCCGAGTTCGACCTTGTGTTGTAAGGTTGTTGATTTGTTGTGTGAGGAAGGAAGGGTTGAGAAGGCTTGTTTGTTGTGGA GGAGGCTTTTGCTGAAGAATTGTTGTCCTGACAATGCAATTGCGAGCACGATTATACATTGGCTTTGCAAGAAGGGGAAGGTGTTGGAAGCGAGGAAGTT GTTTGATGAGTTTGAGAGTGGCTCGGTTGCAAGTCTCTTGACGTATAACACTTTGATTGCTGGAATGTGTGAGACCGGGGAGCTTTGTGAGGCGGCAAGG TTGTGGGATGACATGGTGGAGAAGGGCCATGCTCCTAATGCCTTTACCTATAATGTATTGATTAAAGGATTTTGTAAGGTTGGCAATGCCATGGAGGCTA TTAGAATTCTGGAGGAGATGGTTGGAAATGGATGTTTGCCGAACAAATCAACTTACGCGATATTGATCGAGGGGCTTCCTCGATCAGGAGGAATGAAAGA AGAAATCAACAAGGTAGTTGCATTCGCTGTGTCCACTGGAGTTGATGGTGACTTGTGGGATCTTTTCTTGAAAAATGTCGTGGATAATTCGGATGCCAAC ACATCTGAACTTGATAGGATACTGTTAGAGAATGCATCCTAATTATGTAAGCTCTTAAGGTGTACTGTTGGATCTTATCTTTGCAAGGTGATTAAAAATG AGGATAAAACACTGGAATCAGTTCATCAAATGTGGAAGTATTCACATAGTTTATATCCCCTTTTCTCGGGTGAAATTTGATGCATTAACCGATTGACCAG GAACCATTTCTTTACTGGTTTTTGTCCATAATTACTCCAATTACAGTAACAGACACATCGAGTTTGCTGATTGCCAAATGTAATCATCATTGACATGAGT AGTTCTTGTAACGAAGGGAATGGATTAATATCTTGTATCTTGCTTTACTTAACTGTTATGCTTATGGCAGAGACAGGGAGCTTTACCAATTCTTCAAGAA TAATTGAAGTAAACAATGGGGATGGCTTTGCTGCTAGTATGTCTTGTGGAGATTTCACCAGGTTTCTGAGTCATGGATATTTGTTATTAGCCGAATTGAG CTTTTACTCACTGAAAAGAGCTTTCTGAATTTTTCGGACAGTAGAGGTATAGTGTTTGCTTGAAGGAACCAATGGATTGAGAAAAAAATCTGAGCCAATG AAATTTAATTGAGCTAGGACCCCAGTTTCTCTTAAGCTAGATCTCGGGTTCGAGTCTTGTGAATAGAAAATTTTGATACCGGAAGAATTTGTCCTCTCAA ATGGTTCTTGTCAGCTTGACTCGGACAACTCAGAGTCCAATGTGATTTTGGGATACTGGAGGTTTGGGAATTTTCAAGGTTTTTATGCTGGGTATATTGC ACGGGACCACATCTTCTGTCCCACAATTTGTGCCACTACCACGATCTCATGATTGGATGAAC
• Tissue: pods
• Gene name: LI_gene_195273;
• Additional information: details;

Expression of Ll_transcript_480192

FPKM

• PAB: 1.1
• PNAB: 0
• PS1: 0.5
• PS2: 0.2
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480192

• Blastp: Pentatricopeptide repeat-containing protein At5g16420, mitochondrial from Arabidopsis with 56.26% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g16420, mitochondrial from Arabidopsis with 56.26% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G16420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462037.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;