Ll_transcript_480213

• Id Trinity: TRINITY_DN52752_c1_g3_i2
• Name Transcript: Ll_transcript_480213
• Sequence: GGAAGCAGAAAGAATTAAACGGTGCAAGGGAAGGGTGTTTGCTTTGCAAGATGAGCCAGAAGTTCACAGGGTATGGTTGCCTTTTGATGATGCACCTGGA TTAGCAATGGCTAGAGCGTTTGGAGACTTTTGCTTGAAGGAATATGGAGTGATTTCTATACCGGAATTCTATCACCGTGTGCTTACAGATGGAGATCAGT TCATTGTCATTGCCTCAGATGGGGTAATAATTTTCAATCTCAACTATTTTATTTATTTATAATTTACTTGCTTTTTGTATTCTTCCCAATCTTGGTCGAG GAAGAATTACAAGGTGTAAAAAGATTACGTTCTTGTTTTTTGGTAACATGAAAGTCATTTCATTATTTTTCCCCCGCCTGAAGTTAGTTTCTTATTAGAC CATGTTATGCTATGAAAGAGTGGAATAAGAACATGCAATGAGCAGAGGCAAATTTTTAGAATGATGACATTGCACGCATTAGTTATTTTCTGGCAGTAAT GATACTGAGAAAGGGCTTCTGGAAACCAACCGTGGAGTTGAATAGAATTGTTAAATGCTTTTCACAAAACTCGGAACATGTCTTCTGTTTTTGTGATAGT TGAAAAACAGCTTAGCTAGCTAGCCCTTTGAAAGCCCGAAGGATAAGATTGGCTCTTTTCAGTATGAAGAAACAAATCAGTAGCAAAAGTTGTCTAATGC TAACTGATTGCTTCTCATTTTCTGTTTTCATTCTCGGTTTGCCTTGCTGGACATCGTTAGAACACCTTATCATTTATTACTTCAGCTTTTTCGTGCAAGT TTTCTACAAAAATTATACGAGCATGACATATGATGAGTTTGAATTTAGATTTTGTAAAATAGACTAGAAATTCCGGTTTACCTTTATGTTATTTTATCTT GATTCTACTATCTTGGTTTCTGCTTACCTTTGTTTCATGTTCTCAAACTTCAGTGAAGGAAAAGGTGAAAACAATGAAGAGTTACTTTCACAATTTCTAC ATTTGGCTTTTTTTAAAAGTGAAAACTGTATCACTTTTGTAATTATCAGTGAGAAGGCATATCATTTGAAAATGAAAACTCAACAAAACCAATACCTCTT TAATGTTCTGAAACTACCATCTTCTCGTAATGTGTAGCATAACCAATTCTCTTGATGAATAGTGCAGGTCTGGGATGTTTTAAGCAATGAAGAGGTAGTT GAGATAGTATCTTCAGCACCAACTCGGTCATCAGCTGCAAGGAGTGTGGTGGCATCCGCTGCTCGAGAATGGAAGCTTAAATATCCTACTTCAAAGATGG ATGACTGTGCTGTTGTCTGCCTATTTTTGGATGGAAAAATGGACTCAGAATCTGAATGTGATGAGCAATGTTTTTCTTCTGCAACCATCCAGAGCAACCA CTCTGGTAATCCAGTTGAATCAGATGATGTTCAAAAGTCGGAGCCATCTTTGAAAAGGAACTATACTGTGAGATCCTCAGAAGAAACCTATGGAGGACTA TCTGTTGATGCCGGAGATGGAATATCATCAGCTGAAGAGCAAAACTGGTCCGGTCTGGAGGGCGTAACCCGAGTAAACTCCTTGGTCCAACTCCCTAGAT TTTCTGATGAAAGACCAAATGCTTTATTATAATACCTGTTGTAACTTGTAACATAGTGAATTCAAGAAAGAAAATCTTTCTGTGGATTTGTTGCTTTTCA TTCAGTCAATTCCTTGTACCAAACTAGGCTCAATTAAGTTATTGAATTCTATTGGTTTCAGCATAATGCATGGTGTTAATATCATCAACTCTCAAGAGGT CCTTCTATTTGTGCTCTGAGATTGTTACATATCAAACAAGAAATGCTATCAACTTCTGTTGGTCTAAGTGGTAAGAGTTTAGTTTCTTTTCAGCAATGTC TACACAGTCATTCCTCTAAGCTCTTTTCAGCAATATCTCAACAAGAAATTATGTAAATAAAACAGGAAGTTATTATG
• Tissue: pods
• Gene name: LI_gene_195278;
• Additional information: details;

Expression of Ll_transcript_480213

FPKM

• PAB: 0.5
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.2
• PS3: 0.4
• PW1: 0.6
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480213

• Blastp: Probable protein phosphatase 2C 52 from Arabidopsis with 65.18% of identity
• Blastx: Probable protein phosphatase 2C 52 from Arabidopsis with 69.68% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT4G03415)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440772.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;