Ll_transcript_480214

• Id Trinity: TRINITY_DN52752_c1_g5_i1
• Name Transcript: Ll_transcript_480214
• Sequence: CATGAGTTTTACGTTTTCTCTTCACTCTTTTTTATCATCGATTCAGTGCTAACTAATTTTGCACCGTTTCTCTTGAATCTTCGCACGAACAACAAAACCA GAAAGAGAGAAGAAACAGTGTATTCAAACGCTATTTCTCTCACTCTCACTCTTCTCTTCAAATCATATTCAGATTCCAATTCCATCATTTTCGCTCACTC TCACTCTTCTCATGACTCGCAACGACACCAACCCCTTCGAAGAAGAACAAGAGGTTAATCCTTTTTCGGAGGAAACAGCTAAGGAAAAAAGGTCTGGGCA ATCAAGTTATGACGGAGGTGCATTTTATACGACTAAGAATCCTGGAAGTGTTCCCTCTACAACCTCAAGTCTTTCACCCCTTCCTCACGAGCCTTATGAT CGTGGGGCAACTATTGACATTCCTCTTGATAGCGCAAAGGACGTCAAAGCAAAGGAGAAGGAACTTCAGGCTAAAGAGGCTGAATTGAAAAAAAGGGAAC AGGAAGTAAAACGAAGGGAAGATGCTATAGCACGTGCTGGAATAGTTGTAGAGGAGAAAAACTGGCCACCTTTTTTCCCCATTATTCATCATAACATTGC AGATGAAATACCAATACACCTTCAAAGGGTCCAGTATGTTGCATTTACAACATGGTTAGGAC
• Tissue: pods
• Gene name: LI_gene_195280;
• Additional information: details;

Expression of Ll_transcript_480214

FPKM

• PAB: 0.3
• PNAB: 0.6
• PS1: 1.1
• PS2: 5.5
• PS3: 1.9
• PW1: 0.9
• PW2: 0.6
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480214

• Blastp: Secretory carrier-associated membrane protein 1 from Oryza sativa with 67.33% of identity
• Blastx: Putative secretory carrier-associated membrane protein 1 from Oryza sativa with 63.4% of identity
• Eggnog: secretory carrier membrane protein(ENOG410XSJN)
• Kegg: Link to kegg annotations (4343617)
• CantataDB: Link to cantataDB annotations (CNT0000241)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412917.1)
• Pfam: SCAMP family (PF04144.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;