| Id Trinity | TRINITY_DN52755_c3_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_479024 |
| Sequence | TTTCTCTTCTTCTCTTATTTTTTCTCCCATTGTTCTAACATTTTCCCTTGAATCTACCGAAATCCAACCCCACCCAGAAAGTCAATGGCAATCGTATATT CATAGTTTCACACACTCTCATCTTTTTTCCCCTGTCACACCTTTCTTGTCCTCAAAGTTCTTCATTCTATATATACTCACACTCATCACTTAATCTTAAT AATTTTATTACCAAAATATCTTATTTTTTCTTTTCATTTTCACTCCCAAAAAAATGCATCTCTACAATGCATGGCTTCCACCACCCGTCGCCGCCCAAAC CGCCGCCGAGAGAGACTCCTTCCACCGCCTCGTCTCAATCCTTAACTCCTCCTTCCGCTCCGATGATCCCGATTCCGTTTATTCCACTCTCAAATATATC TCTGTTCTTGACCTTTTCATAAAGGCGAAAAGTGATGTATCTTTGGAAGATGTTCAATCCCTTATTCAGACGGGTCTTGAATTGTTTCACTTGTCTCATA ATAAGCTTTATGTCCAGGTTAGATGGGGAAATTTGGTAGTCAGACTTCTCAACAGGTATAGGAAAAAGGTTGCATTGAGTATTCAGTGGAGGCCTTTATA CGATACTCTAACTAGCACACATTTTACTAGAAGTACAGGTCCAGAAGGTTGGAGAATAAGACAACGGCATTTTGAAACTATAACTTCCCTTGTTCAATCT TGCCGGAAGTTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAGTGAGTGCTCTGGTATTATATCTGCATAATGGATAAAGTTGAATTGT TATGAGTGTTTTTATTTTTATGTTTTTATATATTTTGTACTTTATATTGACGCTGAGCTAAATTAAAGTGAACTGTCTATAGTTCATTTAGTGAAATTAT TCTTGAGCCACAGTAGAACTTACTCTCTTCTATTTATTCTTTTTCAAACTTCCAGCCTTTGATTTAATATATATTTTTATTAATGCCTTTTCTTTTGGTC AATGATTAATTTATAGATCTTTATTGCGAAACCCATGGCATAATTCCACCTTTGAAGGTTCTGGATTTGCAAGACTGTTTCTCCCAACAAATCTGGACAA TCAGGCTTTTTTTACACATGATTGGATAAAAGAGTGTATGGAGTTGTGGAAATCTATACCAAATTGCCAATTCTGGAACAGTCAATGGGCCGATGTTATA GCTCGAGTTGTAAAACAATACCATAATGTTGACTGGGAGTGCTTTTTGCCTTTGCTTTTTTCTAGATACTTGAATATGTTTGAGGTTCCTGTTGCAAATG GAAGTGGATCATATCCCTATTCACTGGATGTCCCGAGATACACAAGGTTCTTGTTCTCTAATAAAACTGCCACCCCATCAAAGGCTACTGCTAAATCAAT TGTGTATTTACTAAAACCTGGTAGTTCAGCACAACAGCACTTTGAGAAGTTGGTCAACATTTTGGAACAATACTATCACCCCTCAAATGGTGGTCGCTGG ACTTACTCATTGGAGCGGTTTTTGTTCCATGTGGTGATTCAATTTCAGAAGCGTCTACAGAATGAACAGTTGAGCATAAATAATAGCAGACCTGCTGAAC AACATCTTGGGGAATCAGAGAGGGTTTTCTTTGTTACTTCGGTGCTGAAGTTAATTGATCGTGGTCAATACAGCAAGAATGAGCATCTCTCCGAGACAGT TGCTGCAGCAACTTCCATATTGTCCTATGTGGAACCCTCATTGGTTCTGCCATTTGTGGCATCTCGGTTTCGTATGGCCCTTGAGACGATGACTGCCATC CACCAGTTGAAAGTTGCAGTTATGTCAGTGGCATTTGTTGGGCGTTCACTATTTTTTACATCTTTATCTGCTTCCTCCATGAAACCACATGATATTGGTG GTGGTGATGATGCATTCATTGATCTTGTGGGGCTTTCATTATCCAATGCATTACTTGGCATGGATGCTAATGACCCTCCAAAAACCATGGCTACCATGCA ATTGATTGGTTCCATTTTTTCAAATCTGACTTTATTGGATGATAACATTGATGACTTATCATTTATGCCCATGATCCGCTTTTCTGAATGGTTAGATGAG TTCTTATGCCGTCTGTTTTCCTTACTTCTACACTTGGAACCCAGCAGTGTTGTAAATGAAGGTCTGCAGTCATCAGCTGCATCAGGAACTTTTCTGGTTG ATGAGGGTCCGTACTACTTTTGTGTGCTTGAGATTCTTCTTGGGAGGCTGTCAAAATCACTTTATAACCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAG GACAAATATTCTTCCGGGTGCTATTGCAGAGGTTGGACTGCTCTGTTGTGCATGCCTTCACTCAAACCCAGAAACAGCAGTTAGTCAAATTGTTGAGCCA ATGTTAGTGTCTTTAATATCCTCTTTGCAAGGAACACCAGGGACTGGATTTGGAGGAGGAGGAACTTTTGAGGCTTCTGCTTCAACAAAGGTTAAATCAA CGATTTCACCAGCTCTTGAAGCTGCAATTGATTATCAACTAAAGATATTATCAGTTGGCATCACATATGGAGGCCCAGCACTCCTCCACTACAAGGATCA ATTCAAAGAAGCTATCTTCTTGGCTTTTGACTCACCATCTTGGAAGATTAATGGAGCTGCTGATCATCTTCTTCGGTCCCTTCTTGGAAGTCAGATTCAT TATTATCCAATAGATCAGTATAAGTGTGTTCTTAGTCACCCTGATGCAGCTTCTCTAGAGCAATGGATTAGCACAAAAGACTTTTCTACTGATGAACGAT TGACCCCAAAGTGGCATATTCCTTGTGATGAAGAAGTTCAGTTTGTAAATGAGCTTTTAGACATTCACTTCAAGTCAGCTTTGGATGATCTGTTGAAAAT ATGCCAATCTAAAATCCATGCTGACCAAGGAGATGAGAAAGAGCACTTGAAAGTAACTCTTTTACGTACTGAATCAACTTTGCAAGGACTTTTTTCTTGC TTGCCTGATTTTGTTCCCAGCTCTAGGGATGGAATGGTTGACGATTCAAACCATATGTTTCTAATTGCTGGAGCAACAGGTTGTACTGTTGGTAGTACTG CTCTGCGAGAAAAAGCTACTGAGATTGTACATGCAGCCTGCAAACATGTCCTTGAGAAAAATTCAGATGACAGCATCCTGTTGATACTCATTATTCGTAT TATGGATGCTTTAGGAAATTATGGAAGTTTGGAATATGATGAGTGGTCTAGTCACAGGCACTCTTGGAAGTTGGAATCTGCTGCCATAATAGAACCTCCA ATTAATTTCATTGTGTCATCTCATTCTAAAGGAAAGAAAAGACCTAGGTGGGCTCTTATCGACAAAGCATTCATGCACAATACCTGGAGATCTTCACAAG CAACCTATCATCTTTACCGTACGAGTGGAAATTTCTTTCCATCAGATCATGTGACTCTTTTGATGGATGATTTATTGAGTCTCTGTTTGCACAGTTATGA AACTGTCCGCCTACTTGCTGGAAAAGCTCTAGTAAAGCTGATCAAGAAGTGGCCATCGATGATTTCAAAGTGTGTTATCACCCTTACCCATAACTTGCAG GACCCCAATGCAAAGGAATATGCAGTGCTGGGTTCTTGTTCAGTCCTATCCTCACAAGCAGTTCTCAAGCATTTGACAACGGATCCAAAATCTTTTTCTT CATTTATCTTGGCGATTCTTTCAAGTTCTCATCATGAATCCTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTTGTAAAGTACAACATCCAATTTTCTGG AGTATCTAGAAGCTTTTTCCAGATATCAGACAAAGACAACCATACCGGTGGACTTTCCTTTTCAGATTTGGTTTCCCAGATTGGCTCTATGAGTTTTGAT TCTAGTGGCTTGCATTGGCGGTATAATTTAATGGCTAACAGAGTTCTGCTCTTGCTGGCTTTGGCTTCTCGGAACCACCCAAATTCATCATTGAAAATTC TGAGTGAAACTGCTGGACACTTTTTGAAAAATTTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCAATTTCAGCTCTGAATACACTATTAAAGGAATC ACCTTATAAGCTGTCTCCTGGTGAGAAATCTGTTGTACTTGAGGATTTACAAGGCAATGCCAAGTCATCCCTTGAAGGAGCTTTAACTAAAGCTTTTCTG GAAGAGGGTTTTTTCAACGAGACACTGACTAGTCTTTCTCATGTTCATATTATAACTGACACTGAAACTGCTACTAGAGGACATCAAGGAGATTCCAGTA TCCAAAGCTTAGCAGACAAATCTATAACCCACTTCTATTTTGAATTTTCGGCTTCATGGCCACGTACACCAAGTTGGATTTCCTTTTTAGGAAATGATAC ATTCTACTCAAGTTTTGCACGTATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTTTAGTATTGTCTCTTAAAGATGCAGTGGATGAGTTTATGATT GCTAAGGAGAGGTCTAAACAATGTGTAGCTGCTGAAGCATTTGCAGGTGTGTTACATTCTGATATTGATGGTCTCTCAGGAGCATGGGAAAGCTGGCTGA TGCCCCAATTGAAGAATATCATTTTAGCACAATCTGTTGAATCAGTTTCTGAGTGGGCCAATTGCATTCGATATGCAGTCACCGGTAAAGGAAAGCATGG AACAAGAGTACCTCTTTTACGGCAGAAAATTCTGGATACTTTGATGACACCTTTACCTCCAACAGTAGCCACTACTATAACAGCCAAGCGATATGCTTTT CTGGCAGCTGCACTTATAGAAATATCCCCACAGAAAATGCCAGTGGCTGAAATGCAGCTCCACAGTACACTTCTGAAGGAAGTTCTTGGCAGTATGTGCC ACTCGTCAGCCCAAGTGAGGGAAGCTCTTGGTGTTACCCTTTCTGTGTTGTGCTCTAACATTCGGCTATATCATTCAAGTCGTGATCATAATGATGATGA GAGAAACAACAATGTTGATGATTTAATGAAAGATGAAAGCTGGGTTCAGTTCCTTACAGAGCGAGCAGCTGAAGCTGTTGTGAACATTCAGATTGCTACC CAATCAGACAAATTGGTGAATTCCATAGATACAAGTTCTCAAAATGGGCATTCTGATGGTGATTCACAAGATGACATGAAATGGATGGAAACGGTACTCT ACTTCATAATCTCATCATTGAAGTCTGGGAGATCCTCATACCTAGTCGACGTGATTGTGGAGCTTCTCTATCCTGTGATTTCCTTGCAGGAAACATCAAA TAAAGATTTGTCAACATTAGCCAAGGCAGCATTTGAGTTGCTCAAATGGATGATTGTCTGGGAACCTCACCTTGAGAAGGTATGATTCTGAAGGCAAGGA AGCTGCAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_195306; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_479024
| Blastp | Proteasome activator subunit 4 from Arabidopsis with 69.37% of identity |
|---|---|
| Blastx | Proteasome activator subunit 4 from Arabidopsis with 69.36% of identity |
| Eggnog | Proteasome (Prosome, macropain) activator subunit 4(ENOG410XP7J) |
| Kegg | Link to kegg annotations (AT3G13330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425529.1) |
| Pfam | Proteasome-substrate-size regulator, mid region (PF16507.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |