Ll_transcript_479028

• Id Trinity: TRINITY_DN52755_c3_g1_i16
• Name Transcript: Ll_transcript_479028
• Sequence: ATCTGCTACATTGACATATTTGCGTACTTTCATGTATAGGCACACTTTCCTTCTTTCAAGTTCAAAGAAACAAGAAATTTGGCAAACCGTTGAGAAGTTA CTAGTAGACAACCAAGTTGAGGTAAGAGAACATGCTGCAGCAGTTTTAGCAGGCTTGATGAAGGGTGGAGATGAAAAGCTAGCTAAAGATTTCCGTGATA GAGCTTATGTGGAGGCGAATGTTGTACAAAAGAGAAGAAAGTCGAGAAATTCAAGATCTGGTTCAGCTGTAGCATCTATTCATGGTGCTGTATTAGCTTT GGCAGCTTCTGTCCTATCAGCTCCATATGACATGCCAAGTTGGTTGCCTGAGCATGTTACACTACTGGCTCGTTTTAGTGGGGAGCCATCCCCTGTGAAA TCTACAGTTACAAAAGCAGTTGCAGAGTTCCGGCGGACCCATGCTGATACATGGAATGTTCAAAAAGAGTTTTTTACTGAAGAGCAACTTGAGATTCTGG CCGATACATCCTCCTCTTCTTCGTATTTTGCTTGATCTAATATTCCAAAGATAGTGCTGAGAGAGTTCTGAAAATAATGGCTGGAGAGAGCTTTTCATTT TAGTGTACTATAAATTGTAAACTAACTCTTATTTACATTTAGTCCCATTAATAATCTTCATGAGTAATTTATTCTTTATTATAGTATCCAAAAGTTGAGC ATCTCCCCTTCCTCTGTTCTGTAATCTTTCTTATACCATAGAGTGAATTAAATCATCTGCTGGTAAATCCCATAAGACAGAGTCTGAGTTGAATATATTG GATAGATTTCTCATTTCTTTTGTAGTCTCGGAATCATCTCCATTATCAAGTTTTTCATGTAACTGGCTTTGCTGATCCATGGTCGTGCATGTGCTTCCAG TACATACACTTTGGCTCCATGGTGATGCACCATCTCCTTTATTGCAAAAGGATGCTGGGCAATAGTTAAATGGAGGCATTGTCGGCAAAACACTGTATTG CATTGCAAAACTTGCAGATGCAGTTGCAGTGGAGTCCCAGGGTTTATTCGAGGGGATCATTTCAGTTTCCTCGCCCATGGCCTTCAAAAAGCCAACCTTA ATCTTTTCAACAGTTCCTTCCTTTTCTTCTGGCCTATAGTTAATGTAATTGGTGAAGTCATTCCCCAGTACTGCAGTGGAATTTTGAGCCTGGAAGTTAA TTGGCTTCTTGGTAAGAAGGTGGAGAACCTCATCTTTGAAGCAGCCAAGGGCTGCTTCAGCTAGGTGAGCTGCCTGTGGGGGTGCCAGTGTTGTAGCAAT TTCAGCCATGAGATGAGAGAATGGCTTGTGGGTCACAGGGTCAATACCCATGCCTGATAGTTTCTTTTTCAGCTTTGTGTTCCAATGGTTTTTGACATCA TTGTCAGTGCGTCCCGGTAGCTGAGCTGCTATTAGTGACCATCTGAAAACTCATTTTAGCAAATTATTTATGGAAGTTAGTCTAGTTCAAAGAGGGAAGT TAAGTACAATGATAGGCCAAAAGATTTTGAAAGATTTAGAGATAATGTTTTGTCAGAGAATGAGTTGATTCACCATAGAGCATTATGGTATTTTTCAATC TATGTAGTTAATTCTGTCTACTGAGATTTGAGATTTAAGGCTGTTGTATAATTAGATAAAGGAACACACACCCACAAAATAAAAATAGAAAATGTTCATA CCTGTTACCAAAAACTGAATGAAGTTTCACAATAGTTTGTTCCTCTGAATCCAAGAATTGGCCATGTTTAAGATCAGGACGAAGGTAGTTAGTCCATCTC AGCCTGCAGCTCTTTCCACATCTTTGGAGCCCT
• Tissue: pods
• Gene name: LI_gene_195306;
• Additional information: details;

Expression of Ll_transcript_479028

FPKM

• PAB: 2
• PNAB: 6.3
• PS1: 9.2
• PS2: 5.4
• PS3: 7.5
• PW1: 5.7
• PW2: 4.7
• PW3: 4.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479028

• Blastp: Transcription factor MYB80 from Oryza sativa with 37.31% of identity
• Blastx: Proteasome activator subunit 4 from Arabidopsis with 79.66% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (9272494)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430871.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;