Ll_transcript_479011

• Id Trinity: TRINITY_DN52755_c3_g1_i2
• Name Transcript: Ll_transcript_479011
• Sequence: TTTCTCTTCTTCTCTTATTTTTTCTCCCATTGTTCTAACATTTTCCCTTGAATCTACCGAAATCCAACCCCACCCAGAAAGTCAATGGCAATCGTATATT CATAGTTTCACACACTCTCATCTTTTTTCCCCTGTCACACCTTTCTTGTCCTCAAAGTTCTTCATTCTATATATACTCACACTCATCACTTAATCTTAAT AATTTTATTACCAAAATATCTTATTTTTTCTTTTCATTTTCACTCCCAAAAAAATGCATCTCTACAATGCATGGCTTCCACCACCCGTCGCCGCCCAAAC CGCCGCCGAGAGAGACTCCTTCCACCGCCTCGTCTCAATCCTTAACTCCTCCTTCCGCTCCGATGATCCCGATTCCGTTTATTCCACTCTCAAATATATC TCTGTTCTTGACCTTTTCATAAAGGCGAAAAGTGATGTATCTTTGGAAGATGTTCAATCCCTTATTCAGACGGGTCTTGAATTGTTTCACTTGTCTCATA ATAAGCTTTATGTCCAGGTTAGATGGGGAAATTTGGTAGTCAGACTTCTCAACAGGTATAGGAAAAAGGTTGCATTGAGTATTCAGTGGAGGCCTTTATA CGATACTCTAACTAGCACACATTTTACTAGAAGTACAGGTCCAGAAGGTTGGAGAATAAGACAACGGCATTTTGAAACTATAACTTCCCTTGTTCAATCT TGCCGGAAGTTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTATTGCGAAACCCATGGCATAATTCCACCTTTGAAGGTTCTG GATTTGCAAGACTGTTTCTCCCAACAAATCTGGACAATCAGGCTTTTTTTACACATGATTGGATAAAAGAGTGTATGGAGTTGTGGAAATCTATACCAAA TTGCCAATTCTGGAACAGTCAATGGGCCGATGTTATAGCTCGAGTTGTAAAACAATACCATAATGTTGACTGGGAGTGCTTTTTGCCTTTGCTTTTTTCT AGATACTTGAATATGTTTGAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCCTATTCACTGGATGTCCCGAGATACACAAGGTTCTTGTTCTCTAATA AAACTGCCACCCCATCAAAGGCTACTGCTAAATCAATTGTGTATTTACTAAAACCTGGTAGTTCAGCACAACAGCACTTTGAGAAGTTGGTCAACATTTT GGAACAATACTATCACCCCTCAAATGGTGGTCGCTGGACTTACTCATTGGAGCGGTTTTTGTTCCATGTGGTGATTCAATTTCAGAAGCGTCTACAGAAT GAACAGTTGAGCATAAATAATAGCAGACCTGCTGAACAACATCTTGGGGAATCAGAGAGGGTTTTCTTTGTTACTTCGGTGCTGAAGTTAATTGATCGTG GTCAATACAGCAAGAATGAGCATCTCTCCGAGACAGTTGCTGCAGCAACTTCCATATTGTCCTATGTGGAACCCTCATTGGTTCTGCCATTTGTGGCATC TCGGTTTCGTATGGCCCTTGAGACGATGACTGCCATCCACCAGTTGAAAGTTGCAGTTATGTCAGTGGCATTTGTTGGGCGTTCATTATTTTTTACATCT TTATCCGCTTCTTCCATGAAATCACTTGATCTTGGTGGTGGTGATGAGGCATTCATTGATCTTGTGGGGCTTTCATTATCCAATGCATTACTTGGCATGG ATGCTAATGACCCTCCAAAAACCATGGCTACCATGCAATTGATTGGTTCCATTTTTTCAAATATGGCTTTATTGGATGATAACATTGATGACTTATCATT TATGCCAATGATCCGCTTTTCTGAATGGTTGGATGAGTTCTTATGCCGTCTGTTTTCCTTACTTCTACACTTGGAACCCAGCAGTGTTGTAAATGAAGGT CTGCAGTCGTCAGCTGCTTCAGGAACTTTTCTGGTTAATGAGGGTCCATACTACTTTTGTGTGCTTGAGATTCTTCTTGGGAGGCTGTCAACATCACTGT ATAACCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAGGACAAATATTCTTCCGGGTGCTATTGCAGAGGTTGGACTGCTCTGTTGTGCATGCCTTCACTC ACACCCAGAAGCAGCAGTTAGTCAAATTGTCGAACCAATATTAGTTTCCGTGATATCCTCTTTGAAAGGAATACCACGGACTGGGTTTGGAGGGGGAGGA ACTTTCGAGGCTTGTGCTTCAACAAAGGTTAAATCAACGATTTCACCAGCTCTTGAAGCGGCAATTGACTATCAACTAAAGATATTATCAGTTGGCATCA CATATGGAGGCCCAGCACTCCTACGCTACAAGGATCAATTCAAAGAAGCTATCTTCTTGGCTTTTGACTCACCATCTTGGAAGGTTAATGGGGCAGCTGA TCATCTTCATCGATCCCTCCTTGGAAGTCAGATTCATTATTATCCAATAGATCAGTATAAGTGTGTTCTTAATCACCCTGATGCAGCTGCTCTAGAGGAA TGGATTAGCACAAAAGACTTTTCCACTGATGATAGATTGATCCCAAAGTGGCATATTCCTTCTGATGAAGAAGTTCAGTTTGTTAACGAGCTTTTAGACA TTCACTTTAATTCAGCTTTGGATGATCTGTTGAAAATATGTCAGTCTAAAATCCATGTTGACCAAGGAGATGAGAAAGAGCACTTGAAAGTGACTCTTTT ACGTATTGAATCAACTTTGCAAGGACTTTTTTCTTGCTTGCCTGATTTTGTCCCTGGCTCTAGGAATGGAATGGTTGAAGATTCAAACAATACATTTCTA ATTGCTGGAGCAACAGGTTGTACTGTTGGTAGTACTGCTCTGCGAGAAAAAGCTACTGAGATTGTACATGCAGCCTGCAAATATGTCCTTGAGAAAAAAT CAGATGACAGCATCCTGTTGATACTCATTATCCGTATTATGGATGCTTTAGGAAACTATGGAAGTTTGGAATATGATGAGTGGTCTAGTCACAGGCATGC TTGGAAGTTAGAGTCTGCTGCAATAATAGAACCTCCGATTAATTTCATTGTGTCTTCTCATTCCAAAGGAAAGAAAAGACCTAGGTGGGCTCTTATCGAC AAAGCATTCATGCACAATACCTGGAGGTCTTCACAGGCAACTTATCATCTTTACCGTTTGAGTGGAAATTTCTTTCCATCAGATCATGCGACTCTTTTGA TGGATGATTTGTTGAGTCTCTGTTTGCACAGTTATGAAACTGTTCGCCTACTTGCAGGAAAAGCTCTAGTAAAGCTGATCAAGAAGTGGCCATCTATGAT TTCAAAGTGTGTTATCACTCTTACCAATAACTTGCAGGACCCCAATGAAAAGGAATATGCTGTGCTGGGTTCTTGTTCAGTGCTTGCCTCACAAACAGTA CTCAAGCATTTGACAAAGGATCCAAAATCATTCTCTTCATTTATCGTGGCAATTCTTTCAAGTTCTCATCATGAATCCTTGAAAGCTCAGAAAGCAATTA ATGAGCTTTTTGTAAAGTACAACATCCAATTTTCTGGAGTATCTAGAAGCTTTTTCCAGATATCAGACAAAGACAACCATACCGGTGGACTTTCCTTTTC AGATTTGGTTTCCCAGATTGGCTCTATGAGTTTTGATTCTAGTGGCTTGCATTGGCGGTATAATTTAATGGCTAACAGAGTTCTGCTCTTGCTGGCTTTG GCTTCTCGGAACCACCCAAATTCATCATTGAAAATTCTGAGTGAAACTGCTGGACACTTTTTGAAAAATTTGAAAAGTCAACTTCCTCAGACAAGGATAC TTGCAATTTCAGCTCTGAATACACTATTAAAGGAATCACCTTATAAGCTGTCTCCTGGTGAGAAATCTGTTGTACTTGAGGATTTACAAGGCAATGCCAA GTCATCCCTTGAAGGAGCTTTAACTAAAGCTTTTCTGGAAGAGGGTTTTTTCAACGAGACACTGACTAGTCTTTCTCATGTTCATATTATAACTGACACT GAAACTGCTACTAGAGGACATCAAGGAGATTCCAGTATCCAAAGCTTAGCAGACAAATCTATAACCCACTTCTATTTTGAATTTTCGGCTTCATGGCCAC GTACACCAAGTTGGATTTCCTTTTTAGGAAATGATACATTCTACTCAAGTTTTGCACGTATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTTTAGT ATTGTCTCTTAAAGATGCAGTGGATGAGTTTATGATTGCTAAGGAGAGGTCTAAACAATGTGTAGCTGCTGAAGCATTTGCAGGTGTGTTACATTCTGAT ATTGATGGTCTCTCAGGAGCATGGGAAAGCTGGCTGATGCCCCAATTGAAGAATATCATTTTAGCACAATCTGTTGAATCAGTTTCTGAGTGGGCCAATT GCATTCGATATGCAGTCACCGGTAAAGGAAAGCATGGAACAAGAGTACCTCTTTTACGGCAGAAAATTCTGGATACTTTGATGACACCTTTACCTCCAAC AGTAGCCACTACTATAACAGCCAAGCGATATGCTTTTCTGGCAGCTGCACTTATAGAAATATCCCCACAGAAAATGCCAGTGGCTGAAATGCAGCTCCAC AGTACACTTCTGAAGGAAGTTCTTGGCAGTATGTGCCACTCGTCAGCCCAAGTGAGGGAAGCTCTTGGTGTTACCCTTTCTGTGTTGTGCTCTAACATTC GGCTATATCATTCAAGTCGTGATCATAATGATGATGAGAGAAACAACAATGTTGATGATTTAATGAAAGATGAAAGCTGGGTTCAGTTCCTTACAGAGCG AGCAGCTGAAGCTGTTGTGAACATTCAGATTGCTACCCAATCAGACAAATTGGTGAATTCCATAGATACAAGTTCTCAAAATGGGCATTCTGATGGTGAT TCACAAGATGACATGAAATGGATGGAAACGGTACTCTACTTCATAATCTCATCATTGAAGTCTGGGAGATCCTCATACCTAGTCGACGTGATTGTGGAGC TTCTCTATCCTGTGATTTCCTTGCAGGAAACATCAAATAAAGATTTGTCAACATTAGCCAAGGCAGCATTTGAGTTGCTCAAATGGATGATTGTCTGGGA ACCTCACCTTGAGAAGGTTGTTTCCGTGGTTCTTTCTGCTTCTGAAGATTCCAACTGGCGAACTAGATCTGCTATATTGACATATTTGCGTACTTTTATG TATAGGCACACTTTCCTTCTTTCAAGTTCAAAGAAACAGGAAATTTGGAGAGCCGTTGAGAAGTTACTAGTAGACAACCAAGTTGAGGTAAGAGAACATG CTGCAGCAGTTTTAGCAGGGTTAATGAAGGGTGGAGATGAAAATCTAGCTAAAGATTTCCGTGATAGAGCTTATGTGGAGGCAAATATTGTACAAAGGAG AAGAAAGTCGAGAAATTCAGGTTCTGGTTCATCTGTAGCATCTCTTCATGGTGCTGTATTAGCTTTGGCAGCTTCTGTATTATCAGCTCCATATGATATG CCAAGTTGGTTGCCTGAACACGTTACACTACTAGCTCGTTTTAGTGGGGAGACATCCCCTGTGAAATCTACAGTTACAAAAGCAGTTGCAGAGTTCCGGC GGACCCATGCTGATACATGGAATGTTCAAAAAGAGTTATTTTCTGAAGAACAACTTGAGGTAGCTTTCTAAAGATATTGTGCTCCTCGATTTAAAAACTT TTCTTATTACGTTTTTCATATCATTTTTCTAATATATTTGTTTAAAACCATATTTACAGATTTTGGCCGATACATCCTCTTCATCATCGTATTTTGCTTG ATTTAATATTTCAAAGATAGTGTTGGGAGAGTTCTAAAAATAATGGCTGGGAAGAGCTTTTCATTGTAGTGTGTCTATAAATTGTAAAAGTAGCTCTTGT TTACATTTAGTACAATTAATCATATTCATGAGTACTTTATTCTTCATTCCAGTATTCAAAAGTTGAGCATCTTGCCTTCCTCTGTTCTGTAATCTTT
• Tissue: pods
• Gene name: LI_gene_195306;
• Additional information: details;

Expression of Ll_transcript_479011

FPKM

• PAB: 1.1
• PNAB: 7.8
• PS1: 7.7
• PS2: 5.5
• PS3: 6.7
• PW1: 4.7
• PW2: 5.5
• PW3: 4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479011

• Blastp: Proteasome activator subunit 4 from Arabidopsis with 69.63% of identity
• Blastx: Proteasome activator subunit 4 from Arabidopsis with 69.63% of identity
• Eggnog: Proteasome (Prosome, macropain) activator subunit 4(ENOG410XP7J)
• Kegg: Link to kegg annotations (AT3G13330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425529.1)
• Pfam: Proteasome-substrate-size regulator, mid region (PF16507.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;