Ll_transcript_479013

• Id Trinity: TRINITY_DN52755_c3_g1_i4
• Name Transcript: Ll_transcript_479013
• Sequence: CATCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCACCTTTCTTGTCCTGAAAGTTGTTCTCTCTCTCATACCTTTCTTGTCC TCAAAGTTGTTTCCAATCTCTCACTATCTCTCTCTCTCTCTCTCTCTATATATACTCACACTCATGACTCATTCTCTATAATTACTACCAAAACCTTCAT TTTTCTACATTCCAAAAATGCATCTCTACAATGCATGGCTTCCACCGCCTGTCGCCGCCCAAACCGCCGCCGAGAGAGACTCCTTCCACCGCCGAGTCTT AACTCTCAACTCCTCCTACCGCTCTGATGATCCCGATTCCGTTTATTCTACTCTCAAACAAATCTCTGTTCTTGACCTTTTCGTGAAGGCGAAAAGTGAT GTATCTTTAGAAGATGTCCATTCCCTTATTCAGACGGGTCTTGAATTGTTTCACTTGTCCCGTAATAAGCTGTATGCGCAGGTTAGATGGGGAAATTTGT TAGTCAGACTTCTCAACAGGTATCGGAAAAAGGTTGCATTGACTATTGAGTGGCGGCCTTTGTACGATACACTGATTAGCACACATTTTACCAGAAGTAC TGGTCCAGAAGGTTGGAGAATAAGACAGCGACATTTTGAAACTATAACTTCCCTTGTTCAATCTTGCCGGAAGTTCTTCCCATCAGGTTCTGCCTTTGAG ATATGGTCTGAGTTTAAGTGAGTGCTCTGGTATTATATCTGCATAATGGAAAAAATGAATTATTATGAGTGTTCTTATTTCTATGTTTTTATATATTTTA TCCTTTATCTTGATGCTGAGCTAAACTAAAATGAACTATCTATAGTTCCATTTAATGGAATTATTATTGACCCACAATAGGCTATTGCCAAATCAATTGT AAGCAAATGTGCCATGGCTAATATTTGATTTAATATTTGTTCTTATTAATGCCTTTTCTTTTGGCCAATGGATAATTTGTAGATCTTTATTGCAAAACCC ATGGCATAATTCAACTTTCGAAGGATCTGGGTTTGCAAGACTGTTTCTCCCAATAAATTTGGACAATCAGGCCTTTTTTACACATGATTGGATAAAAGAG TGTATGGAGTTGTGGAAATCTATACCAAATTGCCAATTCTGGAACAGTCAATGGGCCGATGTTATAGCTCGAGTTGTAAAACAATACCATAATGTTGACT GGGAGTGCTTTTTGCCTTTGCTTTTTTCTAGATACTTGAATATGTTTGAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCCTATTCACTGGATGTCCC GAGATACACAAGGTTCTTGTTCTCTAATAAAACTGCCACCCCATCAAAGGCTACTGCTAAATCAATTGTGTATTTACTAAAACCTGGTAGTTCAGCACAA CAGCACTTTGAGAAGTTGGTCAACATTTTGGAACAATACTATCACCCCTCAAATGGTGGTCGCTGGACTTACTCATTGGAGCGGTTTTTGTTCCATGTGG TGATTCAATTTCAGAAGCGTCTACAGAATGAACAGTTGAGCATAAATAATAGCAGACCTGCTGAACAACATCTTGGGGAATCAGAGAGGGTTTTCTTTGT TACTTCGGTGCTGAAGTTAATTGATCGTGGTCAATACAGCAAGAATGAGCATCTCTCCGAGACAGTTGCTGCAGCAACTTCCATATTGTCCTATGTGGAA CCCTCATTGGTTCTGCCATTTGTGGCATCTCGGTTTCGTATGGCCCTTGAGACGATGACTGCCATCCACCAGTTGAAAGTTGCAGTTATGTCAGTGGCAT TTGTTGGGCGTTCACTATTTTTTACATCTTTATCTGCTTCCTCCATGAAACCACATGATATTGGTGGTGGTGATGATGCATTCATTGATCTTGTGGGGCT TTCATTATCCAATGCATTACTTGGCATGGATGCTAATGACCCTCCAAAAACCATGGCTACCATGCAATTGATTGGTTCCATTTTTTCAAATCTGACTTTA TTGGATGATAACATTGATGACTTATCATTTATGCCCATGATCCGCTTTTCTGAATGGTTAGATGAGTTCTTATGCCGTCTGTTTTCCTTACTTCTACACT TGGAACCCAGCAGTGTTGTAAATGAAGGTCTGCAGTCATCAGCTGCATCAGGAACTTTTCTGGTTGATGAGGGTCCGTACTACTTTTGTGTGCTTGAGAT TCTTCTTGGGAGGCTGTCAAAATCACTTTATAACCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAGGACAAATATTCTTCCGGGTGCTATTGCAGAGGTT GGACTGCTCTGTTGTGCATGCCTTCACTCAAACCCAGAAACAGCAGTTAGTCAAATTGTTGAGCCAATGTTAGTGTCTTTAATATCCTCTTTGCAAGGAA CACCAGGGACTGGATTTGGAGGAGGAGGAACTTTTGAGGCTTCTGCTTCAACAAAGGTTAAATCAACGATTTCACCAGCTCTTGAAGCTGCAATTGATTA TCAACTAAAGATATTATCAGTTGGCATCACATATGGAGGCCCAGCACTCCTCCACTACAAGGATCAATTCAAAGAAGCTATCTTCTTGGCTTTTGACTCA CCATCTTGGAAGATTAATGGAGCTGCTGATCATCTTCTTCGGTCCCTTCTTGGAAGTCAGATTCATTATTATCCAATAGATCAGTATAAGTGTGTTCTTA GTCACCCTGATGCAGCTTCTCTAGAGCAATGGATTAGCACAAAAGACTTTTCTACTGATGAACGATTGACCCCAAAGTGGCATATTCCTTGTGATGAAGA AGTTCAGTTTGTAAATGAGCTTTTAGACATTCACTTCAAGTCAGCTTTGGATGATCTGTTGAAAATATGCCAATCTAAAATCCATGCTGACCAAGGAGAT GAGAAAGAGCACTTGAAAGTAACTCTTTTACGTACTGAATCAACTTTGCAAGGACTTTTTTCTTGCTTGCCTGATTTTGTTCCCAGCTCTAGGGATGGAA TGGTTGACGATTCAAACCATATGTTTCTAATTGCTGGAGCAACAGGTTGTACTGTTGGTAGTACTGCTCTGCGAGAAAAAGCTACTGAGATTGTACATGC AGCCTGCAAACATGTCCTTGAGAAAAATTCAGATGACAGCATCCTGTTGATACTCATTATTCGTATTATGGATGCTTTAGGAAATTATGGAAGTTTGGAA TATGATGAGTGGTCTAGTCACAGGCACTCTTGGAAGTTGGAATCTGCTGCCATAATAGAACCTCCAATTAATTTCATTGTGTCATCTCATTCTAAAGGAA AGAAAAGACCTAGGTGGGCTCTTATCGACAAAGCATTCATGCACAATACCTGGAGATCTTCACAAGCAACCTATCATCTTTACCGTACGAGTGGAAATTT CTTTCCATCAGATCATGTGACTCTTTTGATGGATGATTTATTGAGTCTCTGTTTGCACAGTTATGAAACTGTCCGCCTACTTGCTGGAAAAGCTCTAGTA AAGCTGATCAAGAAGTGGCCATCGATGATTTCAAAGTGTGTTATCACCCTTACCCATAACTTGCAGGACCCCAATGCAAAGGAATATGCAGTGCTGGGTT CTTGTTCAGTCCTATCCTCACAAGCAGTTCTCAAGCATTTGACAACGGTGATTTTCAAGGATCATGTTCTTAAAATTGTCTTTATGGTGTCTCTTACATA TTTTCAAACACTTGTTCAGCCAATACTTTTGTGGCTCTTACATACTCTCTCTTTGATTTAGGATCCAAAATCTTTTTCTTCATTTATCTTGGCGATTCTT TCAAGTTCTCATCATGAATCCTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTTGTAAAGTACAACATCCAATTTTCTGGAGTATCTAGAAGCTTTTTCC AGATATCAGACAAAGACAGTCATACTGGTGGGCTGGCTTTCTCAGATTTGGTTTCCCAGATTGTCTCTATGAGCTTTGATTCTACTGGCTTGCATTGGCG GTATAATTTAATGGCTAACAGAGTTCTGCTCTTGCTGGCTTTGGCTTCTCGGAACCACCCAAATTCATCACCTAAAATTCTGAGTGAAACTGCTGGACAC TTTTTGAAAAATTTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCAATTTCGGCTCTGAATACGCTATTAAAGGAATCACCTTATAAGCTGTCTCCTG TTGAGAAATCTGCTTTACTTGAGGATTTACAAGGCAATTCCAAGTCATCCCTTGAAGGAGCTTTAACTAGAGCTTTTCAGGAAGAGGGTTTTTTCAATGA GACACTAACTAGTCTATCTCATGTTCATATAATAACTGATACTGAAACTGCTACTAGAGGAAATCAAGGAGATTCCAGTTTCCAAAGCTTAGCAGACAAA TCTATAACCCGCTTCTATTTTGAGTTTTCGTCTTCATGGCCACGCACACCCAGTTGGATATCCTTTTTAGGAAGTGATACATTCTACTCAAGCTTTGCAC GTATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTGTAGTATTGGCTCTTAAAGATGCAGTAGATGAGTTTATGACTGCTAAGGAGAGGTCTAAACA ATGTGTCGCTGCTGAAGCATTGGCAGGTGTGTTACATTCTGATATTGATGGTCTATCAGGAGCATGGGAAGGTTGGCTGATGCCCCAGTTGAAGAATATC ATTTTAGCTCAATCTGTTGAATCAGTTTCTGAGTGGGCCAATTGCATTCGATATGCAGTCACCGGTAAAGGAAAGCATGGAACAAGAGTACCTCTTTTAA GGCAGAAAATTCTGGATTCTTTGATGACACCTTTACCTCCAACAGTAGCTACCACTATAACAGCGAAACGATATGCTTTTCTGGCAGCTGCACTCATAGA AATATCCCCACAAAAAATGCCAGCAGCTGAAACGCAGATCCACAATACCCTTCTGAAGGAAGTTCTTGGTAGTATGTGTCACTCATCAGCCCAAGTACGG GAAGCTCTTGGTGTTACCCTTTCTGTGTTGTGCTCTAACCTTCGGCTATATCATTCAAGTTGTAATCATATTGATAATGGGAGAAACAACAATGTTGATG ATTTAATGAAAGATGAAAGCTGGGTTCAGTTCCTTACAGAGCGAGCAGCTGAAGCTGTTGTGAACATTCAGATTGCTACCCAATCAGACAAAGTAGCGAA TCCCATAGATACAAGTTCTCAAAATGGGCATTCTGATGGTGATTCACAAGATGACATGAAATGGATGGAAACGGTACTCTACTTCATAATCTCATCATTG AAGTCTGGGAGATCCTCATACCTAGTCGACGTGATTGTGGAGCTTCTCTATCCTGTGATTTCCTTGCAGGAAACATCAAATAAAGATTTGTCAACATTAG CCAAGGCA
• Tissue: pods
• Gene name: LI_gene_195306;
• Additional information: details;

Expression of Ll_transcript_479013

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 2.3
• PS2: 1.3
• PS3: 0.8
• PW1: 2.5
• PW2: 0.7
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479013

• Blastp: Proteasome activator subunit 4 from Arabidopsis with 71.83% of identity
• Blastx: Proteasome activator subunit 4 from Arabidopsis with 67.16% of identity
• Eggnog: Proteasome (Prosome, macropain) activator subunit 4(ENOG410XP7J)
• Kegg: Link to kegg annotations (AT3G13330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430869.1)
• Pfam: Proteasome-substrate-size regulator, mid region (PF16507.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;