Ll_transcript_479018

• Id Trinity: TRINITY_DN52755_c3_g1_i8
• Name Transcript: Ll_transcript_479018
• Sequence: CATCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCACCTTTCTTGTCCTGAAAGTTGTTCTCTCTCTCATACCTTTCTTGTCC TCAAAGTTGTTTCCAATCTCTCACTATCTCTCTCTCTCTCTCTCTCTATATATACTCACACTCATGACTCATTCTCTATAATTACTACCAAAACCTTCAT TTTTCTACATTCCAAAAATGCATCTCTACAATGCATGGCTTCCACCGCCTGTCGCCGCCCAAACCGCCGCCGAGAGAGACTCCTTCCACCGCCGAGTCTT AACTCTCAACTCCTCCTACCGCTCTGATGATCCCGATTCCGTTTATTCTACTCTCAAACAAATCTCTGTTCTTGACCTTTTCGTGAAGGCGAAAAGTGAT GTATCTTTAGAAGATGTCCATTCCCTTATTCAGACGGGTCTTGAATTGTTTCACTTGTCCCGTAATAAGCTGTATGCGCAGGTTAGATGGGGAAATTTGT TAGTCAGACTTCTCAACAGGTATCGGAAAAAGGTTGCATTGACTATTGAGTGGCGGCCTTTGTACGATACACTGATTAGCACACATTTTACCAGAAGTAC TGGTCCAGAAGGTTGGAGAATAAGACAGCGACATTTTGAAACTATAACTTCCCTTGTTCAATCTTGCCGGAAGTTCTTCCCATCAGGTTCTGCCTTTGAG ATATGGTCTGAGTTTAAATCTTTATTGCGAAACCCATGGCATAATTCCACCTTTGAAGGTTCTGGATTTGCAAGACTGTTTCTCCCAACAAATCTGGACA ATCAGGCTTTTTTTACACATGATTGGATAAAAGAGTGTATGGAGTTGTGGAAATCTATACCAAATTGCCAATTCTGGAACAGTCAATGGGCCGATGTTAT AGCTCGAGTTGTAAAACAATACCATAATGTTGACTGGGAGTGCTTTTTGCCTTTGCTTTTTTCTAGATACTTGAATATGTTTGAGGTTCCTGTTGCAAAT GGAAGTGGATCATATCCCTATTCACTGGATGTCCCGAGATACACAAGGTTCTTGTTCTCTAATAAAACTGCCACCCCATCAAAGGCTACTGCTAAATCAA TTGTGTATTTACTAAAACCTGGTAGTTCAGCACAACAGCACTTTGAGAAGTTGGTCAACATTTTGGAACAATACTATCACCCCTCAAATGGTGGTCGCTG GACTTACTCATTGGAGCGGTTTTTGTTCCATGTGGTGATTCAATTTCAGAAGCGTCTACAGAATGAACAGTTGAGCATAAATAATAGCAGACCTGCTGAA CAACATCTTGGGGAATCAGAGAGGGTTTTCTTTGTTACTTCGGTGCTGAAGTTAATTGATCGTGGTCAATACAGCAAGAATGAGCATCTCTCCGAGACAG TTGCTGCAGCAACTTCCATATTGTCCTATGTGGAACCCTCATTGGTTCTGCCATTTGTGGCATCTCGGTTTCGTATGGCCCTTGAGACGATGACTGCCAT CCACCAGTTGAAAGTTGCAGTTATGTCAGTGGCATTTGTTGGGCGTTCACTATTTTTTACATCTTTATCTGCTTCCTCCATGAAACCACATGATATTGGT GGTGGTGATGATGCATTCATTGATCTTGTGGGGCTTTCATTATCCAATGCATTACTTGGCATGGATGCTAATGACCCTCCAAAAACCATGGCTACCATGC AATTGATTGGTTCCATTTTTTCAAATCTGACTTTATTGGATGATAACATTGATGACTTATCATTTATGCCCATGATCCGCTTTTCTGAATGGTTAGATGA GTTCTTATGCCGTCTGTTTTCCTTACTTCTACACTTGGAACCCAGCAGTGTTGTAAATGAAGGTCTGCAGTCATCAGCTGCATCAGGAACTTTTCTGGTT GATGAGGGTCCGTACTACTTTTGTGTGCTTGAGATTCTTCTTGGGAGGCTGTCAAAATCACTTTATAACCAGGCTTTGAAGAAAATTTCCAAGTTTGTGA GGACAAATATTCTTCCGGGTGCTATTGCAGAGGTTGGACTGCTCTGTTGTGCATGCCTTCACTCAAACCCAGAAACAGCAGTTAGTCAAATTGTTGAGCC AATGTTAGTGTCTTTAATATCCTCTTTGCAAGGAACACCAGGGACTGGATTTGGAGGAGGAGGAACTTTTGAGGCTTCTGCTTCAACAAAGGTTAAATCA ACGATTTCACCAGCTCTTGAAGCTGCAATTGATTATCAACTAAAGATATTATCAGTTGGCATCACATATGGAGGCCCAGCACTCCTCCACTACAAGGATC AATTCAAAGAAGCTATCTTCTTGGCTTTTGACTCACCATCTTGGAAGATTAATGGAGCTGCTGATCATCTTCTTCGGTCCCTTCTTGGAAGTCAGATTCA TTATTATCCAATAGATCAGTATAAGTGTGTTCTTAGTCACCCTGATGCAGCTTCTCTAGAGCAATGGATTAGCACAAAAGACTTTTCTACTGATGAACGA TTGACCCCAAAGTGGCATATTCCTTGTGATGAAGAAGTTCAGTTTGTAAATGAGCTTTTAGACATTCACTTCAAGTCAGCTTTGGATGATCTGTTGAAAA TATGCCAATCTAAAATCCATGCTGACCAAGGAGATGAGAAAGAGCACTTGAAAGTAACTCTTTTACGTACTGAATCAACTTTGCAAGGACTTTTTTCTTG CTTGCCTGATTTTGTTCCCAGCTCTAGGGATGGAATGGTTGACGATTCAAACCATATGTTTCTAATTGCTGGAGCAACAGGTTGTACTGTTGGTAGTACT GCTCTGCGAGAAAAAGCTACTGAGATTGTACATGCAGCCTGCAAACATGTCCTTGAGAAAAATTCAGATGACAGCATCCTGTTGATACTCATTATTCGTA TTATGGATGCTTTAGGAAATTATGGAAGTTTGGAATATGATGAGTGGTCTAGTCACAGGCACTCTTGGAAGTTGGAATCTGCTGCCATAATAGAACCTCC AATTAATTTCATTGTGTCATCTCATTCTAAAGGAAAGAAAAGACCTAGGTGGGCTCTTATCGACAAAGCATTCATGCACAATACCTGGAGATCTTCACAA GCAACCTATCATCTTTACCGTACGAGTGGAAATTTCTTTCCATCAGATCATGTGACTCTTTTGATGGATGATTTATTGAGTCTCTGTTTGCACAGTTATG AAACTGTCCGCCTACTTGCTGGAAAAGCTCTAGTAAAGCTGATCAAGAAGTGGCCATCGATGATTTCAAAGTGTGTTATCACCCTTACCCATAACTTGCA GGACCCCAATGCAAAGGAATATGCAGTGCTGGGTTCTTGTTCAGTCCTATCCTCACAAGCAGTTCTCAAGCATTTGACAACGGATCCAAAATCTTTTTCT TCATTTATCTTGGCGATTCTTTCAAGTTCTCATCATGAATCCTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTTGTAAAGTACAACATCCAATTTTCTG GAGTATCTAGAAGCTTTTTCCAGATATCAGACAAAGACAGTCATACTGGTGGGCTGGCTTTCTCAGATTTGGTTTCCCAGATTGTCTCTATGAGCTTTGA TTCTACTGGCTTGCATTGGCGGTATAATTTAATGGCTAACAGAGTTCTGCTCTTGCTGGCTTTGGCTTCTCGGAACCACCCAAATTCATCACCTAAAATT CTGAGTGAAACTGCTGGACACTTTTTGAAAAATTTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCAATTTCAGCTCTGAATACACTATTAAAGGAAT CACCTTATAAGCTGTCTCCTGGTGAGAAATCTGTTGTACTTGAGGATTTACAAGGCAATGCCAAGTCATCCCTTGAAGGAGCTTTAACTAAAGCTTTTCT GGAAGAGGGTTTTTTCAACGAGACACTGACTAGTCTTTCTCATGTTCATATTATAACTGACACTGAAACTGCTACTAGAGGACATCAAGGAGATTCCAGT ATCCAAAGCTTAGCAGACAAATCTATAACCCACTTCTATTTTGAATTTTCGGCTTCATGGCCACGTACACCAAGTTGGATTTCCTTTTTAGGAAATGATA CATTCTACTCAAGTTTTGCACGTATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTTTAGTATTGTCTCTTAAAGATGCAGTGGATGAGTTTATGAT TGCTAAGGAGAGGTCTAAACAATGTGTAGCTGCTGAAGCATTTGCAGGTGTGTTACATTCTGATATTGATGGTCTCTCAGGAGCATGGGAAAGCTGGCTG ATGCCCCAATTGAAGAATATCATTTTAGCACAATCTGTTGAATCAGTTTCTGAGTGGGCCAATTGCATTCGATATGCAGTCACCGGTAAAGGAAAGCATG GAACAAGAGTACCTCTTTTACGGCAGAAAATTCTGGATACTTTGATGACACCTTTACCTCCAACAGTAGCCACTACTATAACAGCCAAGCGATATGCTTT TCTGGCAGCTGCACTTATAGAAATATCCCCACAGAAAATGCCAGTGGCTGAAATGCAGCTCCACAGTACACTTCTGAAGGAAGTTCTTGGCAGTATGTGC CACTCGTCAGCCCAAGTGAGGGAAGCTCTTGGTGTTACCCTTTCTGTGTTGTGCTCTAACATTCGGCTATATCATTCAAGTCGTGATCATAATGATGATG AGAGAAACAACAATGTTGATGATTTAATGAAAGATGAAAGCTGGGTTCAGTTCCTTACAGAGCGAGCAGCTGAAGCTGTTGTGAACATTCAGATTGCTAC CCAATCAGACAAATTGGTGAATTCCATAGATACAAGTTCTCAAAATGGGCATTCTGATGGTGATTCACAAGATGACATGAAATGGATGGAAACGGTACTC TACTTCATAATCTCATCATTGAAGTCTGGGAGATCCTCATACCTAGTCGACGTGATTGTGGAGCTTCTCTATCCTGTGATTTCCTTGCAGGAAACATCAA ATAAAGATTTGTCAACATTAGCCAAGGCAGCATTTGAGTTGCTCAAATGGATGATTGTCTGGGAACCTCACCTTGAGAAGGTTGTTTCCGTGGTTCTTTC TGCTTCTGAAGATTCCAACTGGCGAACTAGATCTGCTATATTGACATATTTGCGTACTTTTATGTATAGGCACACTTTCCTTCTTTCAAGTTCAAAGAAA CAGGAAATTTGGAGAGCCGTTGAGAAGTTACTAGTAGACAACCAAGTTGAGGTAAGAGAACATGCTGCAGCAGTTTTAGCAGGGTTAATGAAGGGTGGAG ATGAAAATCTAGCTAAAGATTTCCGTGATAGAGCTTATGTGGAGGCAAATATTGTACAAAGGAGAAGAAAGTCGAGAAATTCAGGTTCTGGTTCATCTGT AGCATCTCTTCATGGTGCTGTATTAGCTTTGGCAGCTTCTGTATTATCAGCTCCATATGATATGCCAAGTTGGTTGCCTGAACACGTTACACTACTAGCT CGTTTTAGTGGGGAGACATCCCCTGTGAAATCTACAGTTACAAAAGCAGTTGCAGAGTTCCGGCGGACCCATGCTGATACATGGAATGTTCAAAAAGAGT TATTTTCTGAAGAACAACTTGAGATTTTGGCCGATACATCCTCTTCATCATCGTATTTTGCTTGATTTAATATTTCAAAGATAGTGTTGGGAGAGTTCTA AAAATAATGGCTGGGAAGAGCTTTTCATTGTAGTGTGTCTATAAATTGTAAAAGTAGCTCTTGTTTACATTTAGTACAATTAATCATATTCATGAGTACT TTATTCTTCATTCCAGTATTCAAAAGTTGAGCATCTTGCCTTCCTCTGTTCTGTAATCTTTCTCATACCATAGGGTTATTTAAATCATCTGCTGGTAAAT CCCATAAGACACAATCTGGGTTGAATATATTGGATATATTTCTCATTTCTTTTGTAGCCTCCGAATCATCCCCATTTTCTTCAAGTTTTTCATATAACTG GCTTTGATGATCCATGGGTGTGAATGTGCTTCCAGTACATACACTTTGGCTCCATGGTGATGCATCATCCTCTTTATTGCACAAAGATGCTTGGCTGTAC TGAAACACAGGCATGGTAGGGAAAACACTGTATTGCATTGCAAAACTTGCAGATGTAGCTGCAATCGAGTTCCAAGCTTTATTTGAGAGTATCATTCCAG GTTCGTCATCGGTAACCTTTGAAAAAAAGCCATGCTTAATCTTGTCAGAAGTTCGGTTGATTTCTTCCTGCTCATACATAATGTAATTGTTGATCTCATT CCCCAGTGGTGCAACGGAATGTTGGCCCTGGAAGTTAATTGGCTTCTTGGC
• Tissue: pods
• Gene name: LI_gene_195306;
• Additional information: details;

Expression of Ll_transcript_479018

FPKM

• PAB: 1.3
• PNAB: 6.5
• PS1: 6.4
• PS2: 4.7
• PS3: 5.7
• PW1: 2.8
• PW2: 3.8
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_479018

• Blastp: Proteasome activator subunit 4 from Arabidopsis with 69.56% of identity
• Blastx: Proteasome activator subunit 4 from Arabidopsis with 69.56% of identity
• Eggnog: Proteasome (Prosome, macropain) activator subunit 4(ENOG410XP7J)
• Kegg: Link to kegg annotations (AT3G13330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425529.1)
• Pfam: Proteasome-substrate-size regulator, mid region (PF16507.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;