Ll_transcript_479868

Id TrinityTRINITY_DN52761_c3_g3_i5
Name TranscriptLl_transcript_479868
SequenceCAAAACCGGACTGAAACGAAAAGTAAATTCGGAAGCACAGATACTCTTTATTGATAGAATCATCAGCGAAGACCCCTTTCTCTTTCTTCGCCAAAATCAC TCGCTTCACTCTAGGGTTTCTCTCTCTCTCTCTACAAGCTCTGTTATCACTTCTCACTCACTCAGAACACTGCATTAATCAAATAAAAGCATCACAGCAT TGGCAAGCGGGATGAGTGGAAGTGCTAGAAAGCGCTCTTCAAAGTGGGATATGAGAGATGGCCATGAATTTGCACCTGATAGTAAGCAATTGCGTTCTTA TTTGGAAGGAAATGATAAGTCAAAGTCTGGTATGGGGTTTTCATCCAAGGAACCTTTTTCTCGAGGCAGAGGTTCAAATAAGGATGATATTATGAATAAT AAAGACTATAGAGATTGGGTTGAAACAATGGAATGGGATGCTGATGGAAGTTACAACAATAAACTTTCTCCTGGGTTTGAGGAACGAAAATATAAGAGAC GTAGTCAATCCCCGAAAAATGGTCGGAGCATGTCAGTCAGGAGTAGTCGGAGCAGGAGCCCTCCCCATGGTTTTAGGCGGGATTCAGGATTCAGTGACAT AAATAGAACGAGGGCTGGAGGATCATTACAACCATGTAGAGAGTTTGCTGCTGGTAAATGCAGAAGAGGCAGCAATTGCCATTTTCTTCACCATGATAAT CAAAATTATGAGGATAGTTTGGAAAGTAAACATAGGGAAGATGATGCTCCCAAATATTATGGTCCCCATGACAGTAGAGACCATTCTCATAGGAGTGGTA GATCTAATGAAGCTTGCGTTAATTTTGCTAAAGGCAGATGTAGAATGGGATCATCATGTAACTTTGTGCATAACAGTTCTGGTGGATACAGTAAAGGTTC TGTGGATGAATCAACTAGAGAAAGGGAAAATGATAGAAGACGCAGAGATAATTCTTTTGATCAGGTTGGTGGACTTGGGCCCAACCGTAGTGGTCCTACT CCTTGCAAATTTTTTGCTAACGGAAACTGCCGCAATGCTGGACATTGTAGGTTTTCTCATGATAGGCAAGCATATGGTAGCTCTCCTAATAGAAGATCAA GGGATGATAAGTGGGGGAGCAATCTGGGTGGAGATCATCAGACATTGGATAGACGAGAATTGATTGATTCAGTTAGTCCTACTGGAAGACTAAGAGATAA TAGATGGGGTTCAGATGGCAATATGGTAGACAAGGACAATCCAAAACCGAATGATACAGTTGCTGTGTCTGATACATCAAAGCTGGTTGAGGACAAATGT GGAAATATAGGTGCCTCAGATCCTGGATTTACTCCTTGGCCTAGAAAGGAGGGATGGGGTCATGCTTTATATAAGAACAGAGAGCATAGTGAACTAACAT TTTCGAGTGATAAGGAAACTGGCTATTGGATGGCAGAAAATGCTGGTGCCAACAGGCACGTTCCCCAGCCAGCAGGTACAGGCAATTGGTCTGGTGATGA AATGTCTCCTGATTGGAATTACAGGGTGGGATCTTCTAGTCATATTGAAGAAGAGCATGGACAGAATAAGCATGGGATAACCCAGGGTGGTACATATTTA GCCACTGAACGTGAAAGAACACAATTTATTCCAGGGCAAGCCTTGAATCAGAACGCACAGAATATAAATCCTTCACATTCTTCAAGCGGTCATGGAGTTG GACAAAGTCAAGTGGATGTTCCCAATCTCCCTTCAAGAGGAGTTGTTGAAAGTATGCATAACCAACAAGTTTCTGCTGATCTTCAGGAGCAGGGCTTTAA TAAGAATTCACAGAATCCAAATCTAAATCCAAGCAGCCATGCAGTTGGACAAAGTCAAGTGGCTGTTCCCGGTCTTCCTTCAAGAGGAGTAGATGAAAGT ATGGGTAACCAACAAGTTTCTTATGATGTTCCCTCAGGGAAAGGGTTTAACTACAATCCACAGAATATAAATCCTTTTTATTCTTCAGGTGGCCATGCAG TTGGACAAAGTCAAGTTGCTGCTCCCATTCTTCATTCAATTGAAAGTATGCATAAGCAAGTTTTGAATGATGTTCTTCCAGGGAAAGTCTTTAATTACAA TGCACAAAATATAAATCCTTTGCATTCTTCAAGTGGGCATTCAGTTGGGCAAAGTCAAGTTGCTATTCCAATTCTTCCTTCAAGAGGAATTACTGAAAGT ATGCATAACCAAGAAGTCTCTGCTGAGAAAAAGTACACTGTTGAACCAAATGTCACGGTTGAAGGCTTATCACAAGTTAGTTCAAGAAATCCTCCTACTA AAAATATGGTAAGCAATGAACAGCTTACTCAGTTTAGCAGTCTCTCAGCCTCTCTGGCTCATATCCTTGGAACAGGTCAGCAACTGCCACAACTTTATGC TGCTTTAAATTCTAATGATGCAAAGGATACTTCCTCATTAGCCAAAACTGAAGTGCCAGCTATTCCTGTTTCCAATACATCCATCAAGCCAGATCCTGTG CTTGGATACAGGAAGCAGTATGATCCAATGTGTGATAGCATTGAAACAAAGAAAGTTGTTGCAAGTGGGGCTACCCCTGCCTTTTCTCCAAGTAAAAAGA AGGCAGAAGATAAAGTAGAATTTCAATCACAAGCGTCTAACTCAAGGAGACTAAATTGTGGCAACTCTTTTAAGGCTGCCTGCTCAGAAGAGCATTTAAT CCAGCTGCAGTCAGGTCGAAACCTTGAGTTTAATAAGGAGAAGAATGACGTGATAGTTGAGGAAAGGCAAAATTCGCCTGGTGATCATAAAAATACAAAA GAGAATGGTCCTTTGGAAAACATGGACCAAAAAGGTGGACCTGATGATGATAAGACATCAAAGGATGCAAAAGGGATTCGTACATTTAAATTTGCATTGG TTGACTTTGTTAAGGAGCTTCTGAAACCAGCATGGAAAGAAGGTCAAATTAACAAAGAAGATTATAAAGCAATTGTGAAGAAAGTTGTTGATAAAGTAAC TGGCACCATGCAGGGCACCAATGTTCCTCAGACGCAAGAGAAAATTGACCACTATTTGTCATTCTCTAAACCAAAACTTAGCAAACTCGTACAGGTCAGT GGTGGTTAAGTTACATATTGCCTACATGTTTGAAGGATTTCAACTAGTTCCCCCATCTTACTTTTAGTTTGATAGGTAAATGTAAACATTAGATGAAGCT CCAGAAACTCTTTAGTTTCCAAACTGCTTAATTTTGATGTTGCAAGAGTTGATGGAAAATTGCCCAAATTTAATTTTAGGTGAGAAAATATGTACTTATC CAAGACCTTACATAAAGGGCGGCCAGATGCACGAAACTCTCACCTATTGGGGTCTGGTGATGGTAGATGTACTAAGTTTTACCCTCACATGCAAATATGC TGTTTCCGGGAACCTTTTTGAAAATTGAACTATTTTCTTCTTTTTTTTGAAAATTTACTCAGTTTCTTTTTTATTTATTTCATATTTTACTTATTTTTCA GTTTAACAAGATCTCATGTGGAATTGAAGAAGTGACATCTATCTGTTGTACTTTTTTCATTACAGCTTTTGAATCCATTAAAATATTTTGACCTGATTGA CCTCTACAAGATTTCTCACCATAGTTGCTGAAGTTTTACCCTAATATTTCTTATGTAGAAGTTGTGCTAGTTTGCTACTAGACATATGTTAGCTTCTGAA TCTAGATTGCATTGGAGACATTTGATGATAATTGATTACTTGTGGCCTTTATGAGTTTTCTGGCGTGTTTTACAGTTCTTATCATTTTGGTTGCAGGCTT ATGTGGAAAGGGTTCCGAAGGCTTAGCGCAAGTATAGAAATTTGTCTATCAAATCATTCTTGGTGTTATTGTCTTTATCTTGTACTATGTTTCATTTTCT CCAGAATCTTCTTTTTTGTGTGTCCTCTTATTCCTGTACTCCATTTTCTAGTAGAATCTAGTAGGCATTCCAGAATCCAGAGCTCGTGTACATACAATCT GCGGGCATTTCTTTCTTTTTCGACCTTTAGTTGTTTCTTCTGAGAAGAACTATTGGCTGTTTTGTGCCATTGGATATTAATCTTCAATTGGGATGCTAGG CAGTTGTTATGTGAGAGTCATTTTATTTTGTTAGTTTGTTGTGTAATTACCTGAGGAGTCATCTCTTTCCTTTTTGTAAAACAGAGTTCAGGACTTGTTA AAGAAGGTTGTGAGACTTATGTGCAGACTTTTAAACCTGTTTGTTCAGTTTTCTGACTCTGCAAAAAGTTCCAATGGTGATATTTGCAATTTACCTCCTA AAAAAAA BLAST
Tissuepods
Gene nameLI_gene_195368; 
Additional informationdetails; 

Expression of Ll_transcript_479868

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_479868
BlastpZinc finger CCCH domain-containing protein 55 from Oryza sativa with 52.68% of identity
BlastxZinc finger CCCH domain-containing protein 55 from Oryza sativa with 60.71% of identity
Eggnogzinc finger CCCH domain-containing protein(ENOG410ZKTI)
KeggLink to kegg annotations (4344611)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434518.1)
PfamZinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;