Ll_transcript_480966

• Id Trinity: TRINITY_DN52764_c1_g1_i2
• Name Transcript: Ll_transcript_480966
• Sequence: TATGACTTCTTTATCAGAGACAGACCTATTTGTGACTATTCCAAAATTCTCCATACTAGATGTCCGCCCCAATACCAAACCTGAAATGCGTCTAATGCTT GGATCATCTTCTGATGCTTCCAAACAAACTGTTACTGGAAAGGTTCCTTTTCCATTTAACACCGGTAGCTTTAGGAGGACATCCAGTGAAGTTAAAATTG ACGTTGACATGCCAATTTCAACAATGTTCTTGATGGACTACAGGTGGAGGATGTCATCCCAATCATTTGTGATTCGTGTGCAGCAACCTCGGGTTCTTGT TGTGCCAGATTTTGTTATTGGAGTGGCTGAATTTTTTGTGCCTGCTCTAGGAGCACTCACTGGAAGAGAGGAAACAATGGATCCGAAGAATGATCCTATT AGCAGAACCAGCAACGTAGTGCTAATGGAATCAGTTTACAAGCAGACAGAAGATGTGGTACACCTCTCCCCATCAAAACAGTTAGTGGCTGATTGTGTAG GCATTGATGAATATACTTATGATGCTTGTGGAAAGACTATCTGTTTATCCATTGAAACTGATGCAAGGGATGTCAGGAGCACAAGGTTCAGACCAATTAT AGTTATTGGACACGGCAAGAGATTGCGATTTATGAATGTAAAAATTGAGAATGGTTTTCTACTAAGAAAGTATACGTACCTGAGTTATGATAGCAGCTAC TCAATCTCTACTGAAGATGGAGTTGACATTGTGTTGGAAGACAATTTGCCATCTGGTGACGAGAAAAGACTCATGAATCAAACATCAGGCACTTCTGTAT ATTCTCAAAGTGAATCGATTGGAACTCAAAGTTTTAGCTTTGAAACCCAGGTTGTTTCTTCAGAGCTCACCTTCTATGATGGTTCCAAGTCGTTTCTGGA TGATTCATCCTATGGCGAGAAGCTTATTCGCGCAAAGTTGGACCTGAGCTTCATGTATGCCTCCAAGGAAAAGGATACTTGGATTAGAGCTCTGGTGAAG GATTTTACTCTTGAGGCTGGTTCTGGTCTTATCATTCTAGATCCAGTGGATATATCAGGGGGGTACACTTCTGTGAAGGGAAGAACAAATATTTCTTTGC TATCAACAGACATTTGTATTCATCTTTCACTTAGTGCTGTTTCCCTTATACTCAATCTGCAAAGTCAGGCATCTTCTGCATTAAGTTTCGGAAATGCAAC TGCCCTGGTTCCGTGCACCAACTTTGACCGAATTTGGGTTTCTGGAAAAGGGACTAGTCCAGACAATATCACCTTTTGGAGGCCTCGAGCACCTGCCAAT TATGTTGTATTAGGGGATTGTGTGACATCAAGATCAATTCCTCCGTCACAAGCAGTAATGGCAGTAACTAACATGTATGGGCGTGTAAGGAAGCCAGTTG GTTTCCATCTTATTGGGTCATTCCTGGACATTCAAGGGGATGTTGGAGGTGAAGAACATTCTGTTGATGACAGTGATTGTTCTCTTTGGATGCCCATTGC ACCCCCAGGTTACACAGCATTGGGCTGTGTAGCCCATGTTGGGAACCAACCACCACCAAATCATATCGTTCATTGCTTACGTTCTGATCTTTTAACATCA ACAAAATGTTCAGACTGCTTATTTAATATGCCGCCGAATAATCAATTAACATCTGGATTTAGCATATGGCGCCTTGATAATGCTATTGGCTCATTTTTGG CGCATTCTTCAACTGGTTGCCCCCTGAATGATAAATGTTATAACTTAAATCATTTGCTCGTCTGGAATTCAAATAGGGTTCCTCTGATAGGTTCAGTCTC AGATTTTAATTCTGATCCTGAAAATAATAATCAACAGACAAGCAAAAGTGTGAACACATCAGGATGGGATATCCTCAAGTCCATTTCAAAAGCCACTAAC TGCTATATGTCCACACCGAACTTTGAAAGAATTTGGTGGGACAAAGGTAGTGACCTCCGTCGTCCAGTCTCTATTTGGCGACCTATTGCACGTCGTGGTT ATGCAGTCTTGGGTGATTGCATCACTGAAGGGCTGGAACCTCCTGCACTAGGAATCATCTTCAAGAATGACAATCCTGATATATCTTTAAAACCTGTTCA ATTTACCAAAGTTTCCCATATTGGTGGGAAAGGGGTTGATGAAATTTTCTTCTGGTATCCTATAGCTCCTCCTGGTTATGTTTCTCTAGGTTGTGTTGTC ACCCGAATAGATGAAGCACCACGTGCAGATTTGCTTTGCTGCCCGAGGATGGATCTTGTTAGCCAAGCAAACATTCATGAGGTGCCTCTTTCGAGGTCTT CAAGCTCACGGGCTCCTCAGTGCTGGAGCATATGGAAAGTACAAAATCAGGCTTGTACTTTTATGGCTCGTTCTGACCTTAAAAAGCCATCAAGCCAATT GGCCTACATCATTGGTGACTCTGTGAAACCGAAGACTGAGGAAAACATAAATGCTGAGCTGAAGCTAAGATTCTTTTCTGTAACGATTTTGGACAGCTTA TGTGGAATGATGAGACCCCTATTTGACACAACAATTACCAATATTAAGCTTGCAACACGTGGTGGACTTCAAGGGATGAATGCAGTATTGATTTCTTCAA TTGTTGCATCAACCTTCAATGCACAATTAGAGGCATGGGAGCCCCTTGTGGAGCCATTTGATGCCATATTCAAGTTTGAAACTTATGATAACAATGCACA ATCACAATTGGGGCTTGGGAAGAGAGTTCGAGTTTCTGCTACAAGTATCCTGAATGTAAATGTCAGCGCAGCAAATCTCGAATCCTTTGTGGGAAGCATT CTATCTTGGAGAAGACAATTAGAACTTGAACAAAAAGCATCAAAGCTACATATGGGGGTTGGTGGTCTTCAAAGCAAGGGGGAGGATGCAAGTTTTTCTG CACTAGACGAGGATGACTTGCAGACTGTGATACTAGAAAATAAACTTGGGTGTGATATTTTTGTCAAAAAAGTTGAGCATGATGAGGAGATAGTTAACAA GCTACATCATGGTGATTGTACTTCTGTGTGGACTCCACCTCCTAGATTTTCGGAGAGGTTAAACGTTGCAGATGAATCTAGAGAAGCACGATATTATATT GCTGTACAGATACTTGAGGCCAAGGGTTTACCCATCGTTGATGATGGTAACAGCCATAACTTCTTCTGTGCTTTGCGTCTCGTCATTGACAGCCAAGCAT CAGAGCAGCAAAAGCTTTTTCCCCAAAGTGCAAGAACAAAGTGTGTGAAGCCTGTAGTGTCAAGAACTAATGGTTGGGAAGTAGGCACCGTGAAATGGAA TGAACTTTTCATATTTGAAGTTCCTAGAAAGGCCCCTGCGAAGTTGGAAATAGAGGTTACAAATCTAGCTGCAAAAGCTGGAAAAGGGGATGTTGTGGGT TCACTTTCATTTTCTGTTGGACATGGTGCAAATGTTCTGAGAAAGGTTGCTTCTGTGAGATTGTTTCATCAACCATATGATTTTCAGAATATTAGAACGT TCCCACTTAGTAGAATGGTTGAACAAAGCAACGTTGAAGCCATGCACAACGGGTGCCTCTTTGCTTCAACTTCTTATTTCGAAAGAAACACAATTGCTAA AATTCAACAAGATATGGAAAGTGGGAATGTTATTGATGGAGACATTGGTTTTTGGGTAGGGCTTGGCCCAGAGGGGGAGTGGGAGAGTGTTCGGTCATTG CTTCCACTGTCAGTGGTTCCAAAATCATTAAATAATGAATACATTGGTATGGAAGTTGTCATGAAAAATGGAAAAAAGCATGCAATTTTCAGGAGTCTTG TTACAGTAGTGAATGAGTCAGATGTTGTGTTGAATATTTTGACTTCCCTTGCCTCTAATGGCAGTGATCCCTTACTTGGGGCAAACAGTTCAAATAATGT TGTTGAAGAGGTCTTTCAAAATCAGTGTTATTCGTCATCAGGTTGGGGCAATAATTGGCCAGCTGTGCACCTTGACAATCCTGGCCACTGGAGCACAAGG GATTTCTCATTCTCATCTAAGGACTTCTTTGAACCTCCGCTTCCTCCTGGATGGAAATGGGCGTCGGGTTGGTCCATAGATAAGTTTCAGTATGTTGACA AGGAAGGCTGGGCCTATGGACCTGACCTTAAAAAGTTAAAGTGGCCCCCTACTTCTTTGAAGTTTTCAACAAAATTAGCCTCTGATGTTGTGCGTCGAAG GCGCTGGGTTCGTACTCGACAAACCTTTTCTGATGAAGGTACTGAATGCTTGCAGAGCGGAGCAAATACCATACAGCCTAAGGCTTCTGCTGTTTTATCT TGGAGAAGTACGTTGAAAGACTCTAACCAATGTTTGCAAGTTCGACCTAACTTCGATAGTTCTCAGCCCTCCTACTCATGGGGTCGTGCAGTAGCTGCTG GTTCAAGTTACATATATAGCAAAGACAACCTATTAGATCCAGGTTCTAGACAAAATTCTGTGACGCCTTCTTTGAAGTTAAATGAGCTTGAGAAAAAGGA TATACTGCTATGCTGTAATCCTAGTAGTGGAAGTAAACAATTATGGTTTAGTGTGAGTTCAGATGCCACAGTTCTTAATACTGCACTAAATGTTCCTGTA TATGATTGGAAAATATCTATCAACTCTCCCATGAAATTGGAGAATCGGCTTCCTTGTCCTGCTGAGTTTTCAATCTTGGAGAAAACAAAGGAAGGAAATT GTGTTGAGCTGCATCATGGTGTCATATCTTCTCGTCAGAGTGTACATATCTATTCAGCTGATATTCAGAAACCTGTGTATCTGAATTTGTTTGTGCAGGG TGGTTGGGTTATGGAAAAGGCGGACCCTATTCTTGTACTGGATCCTTCTTTCTCCAATCACTTCTCATCTTTCTGGATGATTCACCGGCAAAGTAGAAGG AAACTGCGTGTGAGCATTGAACATGATATGGGGGGCACAAGTGCTGCACCAAAAACCTTGAGAATTTTTGTCCCTTATTGGATTGTCAATGATTCTTCTC TTGCTTTGGCATATCGTGTGGTGGAAGTGGAACCTTTGGAAAATGCAGAGATAGATGCTGTCCATCTATCTAGAGCAGTTAAGTCTGCCAAAACAGCCTT GAAAAGTCCCATCAGCTCAATGGATAGAAAGCATTCTACTTCAAGGAGAAACCTTCAAGTACTTGAAGTAATTGAAGATAACAGTCCGTTTCCTAGTATG CTTTCTCCACAAGATTATGCTGGTCGTAGTGGAGTTACAATGTTTCAATCTCAAAAAGATACATATTTGTCACCAAGGGTGGGCATTTCTGTTTCTATGC GCCATTCTGAAGTTTACAGTTCTGGGATTTCTCTGCTTGAGCTAGAAAACAAGGAACGTATTGATGTCAAGGCTTTCAATTCTGATGGATCTTACCACAA ACTTTCAGCATTGTTGAACATGACTTCAGACAGAACAAAGGTGATTCATTTCCAGCCACACACAATGTTTGTTAATAGGGTTGGACGTAGTCTCTGCCTG CAGCAATGTGATTCTCAATCAGCTGTATGGATTCATCCTACTGATCCTCCAAAACCTTTTGAGTGGCAGTCATCAGCTAAAGTTGAACTTTTGAAGTTGC GGATTGATGGCTACAAATGGAGTATGCCATTTAGTGTTAGCTATGAAGGTGTAATGCGGATTAGCTTGAAAAAAGATGTTGGGAATGACTCTATGCAATT AAGGGTATCAGTAAGAAGTGGTGCCAAGAGATCACGCTTTGAAGTTATTTTTCGTCCAAATTCATTGTCAAGTCCTTACAGGATTGAAAATCGCTCCATG TTCTTGCCCATCCGCTTTCGCCAAGTTGACGGTCTTGGTGATTCCTGGCAGCTGCTTCTTCCGAATTCAGCTGCTTCATTTTTGTGGGAAGATCTTGGTA GAAGACGTTTGTTGGAACTGTTGGTAGATGGTACTGACCCAATGAAATCACTGAAGTATGATATTGATGAAATTTCTGATAATGAGCCCATCAGTGCAGC AGATGGACCAACAAGAGCCTTGCGTGTTACTATTGTAAAGGAAGAGAAAATCAATGTTGTTAAGATCAGTGACTGGATGCCAGAAACCGAACCTGCAGGA GTTCTGGGCAGAAGGAATTTATCATCAATGGGTGACTCTCAAAAGCAACAACTAATGTCAGCTACAGATGCTGAATTCCACATCAATTTTGATCTTGCAG AGCTTGGAATATCTATTATAGATCATACGCCTGAGGAAATTTTATACTTGTCTGTTCAGAATCTTGTTATGGCATACTCAACTGGTTTGGGATCTGGAAT TAGTAGATTTAAACTCAGAATGACCGGGTTACAGGTGGACAATCAATTGCCGTTAACTCCAATGCCGGTTCTATTCAGGCCACAGAAAGCTGTGGCAGAA ACTGATTATATCCTGAAATGTTCTGTGACAATGCAGTCAAATGGATCGTTGGATCTTTGTGTCTATCCATACATTGGTCTTCATGGGCCAGAAAGTTCTT CTGCCTTTTTGGTAAACATTCATGAACCTGTTATTTGGCGCCTTCATGAAATGATCCAACAGGTGAAGCTCAGTAGGCTGTACGATTCTCAAATAACTGC TGCATCAGTTGATCCAATCATTCAAATTGGCGTGCTTAATATGTCTGAAGTTCGACTCAGAGTGTCAATGGCTATGTCACCCAGTCAAAGACCAAGGGGT GTGCTTGGGTTCTGGGCATCCTTAATGACTGCATTGGGTAACACAGAAAATATGCCTGTCAGGATAAACCAGAGGTTTCATGAGAACATTACTATGAGGC AGAGTGCTATGATTAGCATGGCAACTTCAAACATCCAGAAGGATCTTCTTGGCCAACCACTTCAGCTTCTCTCAGGTGTTGATATACTGGGCAATGCAAG TAGTGCACTTGGACATATGAGTAAAGGTGTGGCTGCATTGTCTATGGACAAAAAGTTCATTCAAAGTCGGCAGAGACAGGAAAACAAAGGTGTGGAGGAT TTTGGTGATGTTATTAGAGAGGGAGGTGGAGCATTTGCTAAAGGTTTATTTAGAGGGGTAACTGGCATTTTAACAAAGCCTCTTGAAGGAGCAAAAACTT CTGGTGTTGAAGGTTTTGTTCAGGGTGTTGGGAAAGGTATTATTGGTGTAGCTGCACAACCAGTGAGTGGAGTTCTTGATCTTCTTTCAAAAACAACCGA AGGTGCTAATGCTATGAGAATGAAAATTGCATCTGCTATAACATCTGATGAACAACTTCTCCGAAGGAGATTGCCTCGTGTTATAAGTGGTGATAATTTG CTTCGACTATATGATGATTACAAAGCTCAAGGACAGGTCATATTGCAGTTGGCAGAATCAGGTTCTTTTTTTGGCCAGGTTGATCTTTTCAAAGTTCGGG GAAAGTTTGCCTTAACAGATGCTTATGAAGATCACTTTATGCTTCCGAAAGGGAAAATTCTGATGGTCACTCATAGAAGAGTCATACTATTGCAACAACC ATCCAATATTATTGCTCAGAGGAAGTTCAGCCCTGCAAGGGATCCATGTTCAATTCTGTGGGACATAATGTGGGATGACCTCGGTACGTTGGAACTGACA CACGGAAAAAAAGACAACCCAAAAGGTCTACCTTCACAGCTCATATTATATTTGCAGTCTAGATCAATGGATATAAAAGAAAATGTTCGCTTCATAAAGT GCACCCCTGAATCCCATCAAGCACTTGAAGTGTACTCTTCAATTGAGCATGCATTGAGTACTTATGGCCCAGGTGCATCAAAGGGAATACTGAAAAATAA AGTGACAAAACCATATTCACCATTTGCTGCTGATGCTCCTAGTTCTAGTATTGATTTAATAGCAAAAGATGGGGCTTCCCCATGGTCCCCCCAACATATG CCTGGATCTGCTCCCCTCTCTTCAACTTTTGGAAGCAGGACCGATCCTAATGACTGAGTTTTCAC
• Tissue: pods
• Gene name: LI_gene_195391;
• Additional information: details;

Expression of Ll_transcript_480966

FPKM

• PAB: 0.8
• PNAB: 3.6
• PS1: 5.2
• PS2: 4.2
• PS3: 5.2
• PW1: 2.4
• PW2: 4.4
• PW3: 4.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480966

• Blastp: Vacuolar protein sorting-associated protein 13C from Homo with 36.59% of identity
• Blastx: Vacuolar protein sorting-associated protein 13C from Homo with 36.59% of identity
• Eggnog: Vacuolar Protein(COG5043)
• Kegg: Link to kegg annotations (54832)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431161.1)
• Pfam: Vacuolar protein sorting-associated protein 62 (PF06101.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;