Ll_transcript_480967

• Id Trinity: TRINITY_DN52764_c1_g1_i3
• Name Transcript: Ll_transcript_480967
• Sequence: TATCGTATGACCTCTTTATCAGAGAGTGATCTGTTCGTAACTATTCCGAAATTTTCCATACTAGATGTCCGCCCTGATACGAAACCTGAAATGCGTCTAA TGCTTGGATCATCTTCTGATGCTTCCAAACAAACAGTTACTGGAAAAGTTCCTTTTCCATTTAACCCAGGTAGCTTTAGGAGGACATCCAGTGAAGCTAG AGTTGAAACTGACATGCCAATTTCAACAATGTTCTTGATGGACTACAGGTGGAGGATGTCATCCCAATCATTTGTGATTCGTGTGCAGCAACCTCGGGTC CTTGTTGTGCCAGATTTCCTTCTTGCTGTGGCTGAGTTTTTCGTGCCTTCTCTAGGAGCGCTAACTGGAAGAGAGGAAATGACGGATCCAAAGAACGATC CTATTAGCAGAAATAGTAGCATAATGCTAATGGAATCAGTATACAAGCAGACAGAAGATGTGGTTCACCTCTCCCCATCAAAACAGTTAGTTGCAGATTG TGTAGGCATTGATGAATATACATATGATGGTTGTGGAAAGACTATTTATTTATCTGTTGAAACTGATGAAAAGGAAGTTCGGAGCTCAAGGTTTAGACCA ATTATAGTCATTGGACATAGTAAGAGATTGCGATTTATTAACGTAAAAATTGAGAATGGTTCACTATTAAGAAAGTATACGTACCTGAGTTATGATAGCA GCTACTCAATCTCTATTGAAGACGGTGTTGACATTGTGTTGCATGACAATTTTCCATCTGCTGATGAGAAAAGTCTTACGAATCAAACATCATGCACTTC TGTATATTCTCAAAGTGAAGTGAGTGGAACTGAAAGTTTTAGCTTTGAAACTCAGGTTGTTTCTTCAGAGCTCACCTTCTACGATGGTTCTAAGTCCTTT CTGGATGATTCATCCTATGGGGAGAAGCTTATTCGTGCAAAGTTGGACATGAGCTTCATGTATGCCTCCAAGGAAAAGGACACTTGGATTAGAGCTCTGG TTAAGGATTTTACTCTTGAGGCTGGTTCTGGTCTTATCATTCTAGATCCAGTGGATATATCAGGGGGGTATACTTCTGTGAAGGACAGAACAAATATTTC TTTGCTATCAACAGACATTTGTATTCATCTTTCACTTAGTGCTGTTTCCCTTATACTCAATCTGCAAAGTCAGGCATCTGCTGCATTAAATTTTGGAAAT GCAACTCCCCTTGTTCCGTGCACCAACTTTGACCGAGTTTGGGTTTCTGGAAAAGGAACTGGTCCAGACAATATCACCTTTTGGAGGCCTCGAGCACCTG CCAATTATGTTGTATTAGGAGATTGTGTGACATCAAGGCCAATTCCTCCATCACAGGCTGTAATGGCAGTATGTAACACATATGACCGTGTAAGGAAGCC TGTTGATTTCTATCTTATTGGGTCATTCCTGGACATTCAAGGGCATGGTGGAGGTGAAGGACATTCTGTTGCTGACAATGATTGTTCTCTTTGGATGCCC ATTGCACCCTCAGGTTACACAGCACTGGGCTGTGTAGCCCATGTCGGGAACCAACCACCACCGAATCATGTTGTTCATTGCTTACGCTCTGATCTCGTAA CATCAGCAAAATATTCAGACTGCTTATTTAATATCCTGCCAAATAATAAATTTACCTTTGGATTTAGCATATGGCGCCTTGATAATGCTATTGGCTCATT TTTGGCACATTCCTCAACTGGTTGCCCCCTGTATGACAAATGTTATAACTTAAACCATCTGCTTGTCTGGAATTCAAATCGAGCACCTTTGATAAGTTCA GTCCCAGATTTCAGTTCAGATCATGAAAATAACAATCAGCAGACAAGTAAAAGTGCGAACACATCAGGATGGGATATCCTCAAGTCCATTTCAAAAGCAA CTAACTGTTATATGTCTACACCAAACTTTGAAAGAATTTGGTGGGACAAAGGTAGTGACCTCCGTCGTCCAGTCTCTATTTGGCGACCTATTGCACGTCG TGGTTATGCAGTCGTGGGTGATTGCATCACTGAAGGAGTAGAACCTCCTGCGCTAGGCATAATCTTCAAGAATGATAATCCTGATATCTCTTCAAAACCT GTTCAATTTACCAAAGTTTCCCATATTGTTGGGAAAGGAGTTGAAGAAGTTTTCTTCTGGTATCCTATAGCTCCCCCTGGTTATGTTTCTCTAGGGTGTG TAGTCACAAGAACAGATGAAGCACCACATGCAGATTTGTTTTGTTGCCCGAGGATGGATCTTGTTAGCCAAGCAAGCATTCATGAGTTGCCTCTCTCGAG ATCTTCAAGCTCACGGGCTCCTCAGTGCTGGAGCATATGGAAAGTAGAAAATCAGGCATGCACTTTTTTGGCTCGTTCCGACCTTAAAAAACCATCAAGC CGATTAGCCTACATAATTGGTGATTACGTGAAGCCGAAGACTCGGGAAAACATAAATGCTGAACTGAAGCTGAGATTCTTTTCTATAACGATTTTGGACA GCTTATGTGGAATGATGAGACCCCTATTTGACACAACAATTACCAATATTAAGCTTGCAACACATGGTGGACTTGAAGGGATGAATGCAGTAGTGATTTC TTCAATTGTTGCATCAACCTTCAATGCACAATTAGAGGCATGGGAGCCCCTTGTGGAGCCATTTGATGCCATATTCAAGTTTGAAACTTATGATAACAAT GCACAATCACAATTGGGGCTTGGGAAGAGAGTTCGAGTTTCTGCTACAAGTATCCTGAATGTAAATGTCAGCGCAGCAAATCTCGAATCCTTTGTGGGAA GCATTCTATCTTGGAGAAGACAATTAGAACTTGAACAAAAAGCATCAAAGCTACATATGGGGGTTGGTGGTCTTCAAAGCAAGGGGGAGGATGCAAGTTT TTCTGCACTAGACGAGGATGACTTGCAGACTGTGATACTAGAAAATAAACTTGGGTGTGATATTTTTGTCAAAAAAGTTGAGCATGATGAGGAGATAGTT AACAAGCTACATCATGGTGATTGTACTTCTGTGTGGACTCCACCTCCTAGATTTTCGGAGAGGTTAAACGTTGCAGATGAATCTAGAGAAGCACGATATT ATATTGCTGTACAGATACTTGAGGCCAAGGGTTTACCCATCGTTGATGATGGTAACAGCCATAACTTCTTCTGTGCTTTGCGTCTCGTCATTGACAGCCA AGCATCAGAGCAGCAAAAGCTTTTTCCCCAAAGTGCAAGAACAAAGTGTGTGAAGCCTGTAGTGTCAAGAACTAATGGTTGGGAAGTAGGCACCGTGAAA TGGAATGAACTTTTCATATTTGAAGTTCCTAGAAAGGCCCCTGCGAAGTTGGAAATAGAGGTTACAAATCTAGCTGCAAAAGCTGGAAAAGGGGATGTTG TGGGTTCACTTTCATTTTCTGTTGGACATGGTGCAAATGTTCTGAGAAAGGTTGCTTCTGTGAGATTGTTTCATCAACCATATGATTTTCAGAATATTAG AACGTTCCCACTTAGTAGAATGGTTGAACAAAGCAACGTTGAAGCCATGCACAACGGGTGCCTCTTTGCTTCAACTTCTTATTTCGAAAGAAACACAATT GCTAAAATTCAACAAGATATGGAAAGTGGGAATGTTATTGATGGAGACATTGGTTTTTGGGTAGGGCTTGGCCCAGAGGGGGAGTGGGAGAGTGTTCGGT CATTGCTTCCACTGTCAGTGGTTCCAAAATCATTAAATAATGAATACATTGGTATGGAAGTTGTCATGAAAAATGGAAAAAAGCATGCAATTTTCAGGAG TCTTGTTACAGTAGTGAATGAGTCAGATGTTGTGTTGAATATTTTGACTTCCCTTGCCTCTAATGGCAGTGATCCCTTACTTGGGGCAAACAGTTCAAAT AATGTTGTTGAAGAGGTCTTTCAAAATCAGTGTTATTCGTCATCAGGTTGGGGCAATAATTGGCCAGCTGTGCACCTTGACAATCCTGGCCACTGGAGCA CAAGGGATTTCTCATTCTCATCTAAGGACTTCTTTGAACCTCCGCTTCCTCCTGGATGGAAATGGGCGTCGGGTTGGTCCATAGATAAGTTTCAGTATGT TGACAAGGAAGGCTGGGCCTATGGACCTGACCTTAAAAAGTTAAAGTGGCCCCCTACTTCTTTGAAGTTTTCAACAAAATTAGCCTCTGATGTTGTGCGT CGAAGGCGCTGGGTTCGTACTCGACAAACCTTTTCTGATGAAGGTACTGAATGCTTGCAGAGCGGAGCAAATACCATACAGCCTAAGGCTTCTGCTGTTT TATCTTGGAGAAGTACGTTGAAAGACTCTAACCAATGTTTGCAAGTTCGACCTAACTTCGATAGTTCTCAGCCCTCCTACTCATGGGGTCGTGCAGTAGC TGCTGGTTCAAGTTACATATATAGCAAAGACAACCTATTAGATCCAGGTTCTAGACAAAATTCTGTGACGCCTTCTTTGAAGTTAAATGAGCTTGAGAAA AAGGATATACTGCTATGCTGTAATCCTAGTAGTGGAAGTAAACAATTATGGTTTAGTGTGAGTTCAGATGCCACAGTTCTTAATACTGCACTAAATGTTC CTGTATATGATTGGAAAATATCTATCAACTCTCCCATGAAATTGGAGAATCGGCTTCCTTGTCCTGCTGAGTTTTCAATCTTGGAGAAAACAAAGGAAGG AAATTGTGTTGAGCTGCATCATGGTGTCATATCTTCTCGTCAGAGTGTACATATCTATTCAGCTGATATTCAGAAACCTGTGTATCTGAATTTGTTTGTG CAGGGTGGTTGGGTTATGGAAAAGGCGGACCCTATTCTTGTACTGGATCCTTCTTTCTCCAATCACTTCTCATCTTTCTGGATGATTCACCGGCAAAGTA GAAGGAAACTGCGTGTGAGCATTGAACATGATATGGGGGGCACAAGTGCTGCACCAAAAACCTTGAGAATTTTTGTCCCTTATTGGATTGTCAATGATTC TTCTCTTGCTTTGGCATATCGTGTGGTGGAAGTGGAACCTTTGGAAAATGCAGAGATAGATGCTGTCCATCTATCTAGAGCAGTTAAGTCTGCCAAAACA GCCTTGAAAAGTCCCATCAGCTCAATGGATAGAAAGCATTCTACTTCAAGGAGAAACCTTCAAGTACTTGAAGTAATTGAAGATAACAGTCCGTTTCCTA GTATGCTTTCTCCACAAGATTATGCTGGTCGTAGTGGAGTTACAATGTTTCAATCTCAAAAAGATACATATTTGTCACCAAGGGTGGGCATTTCTGTTTC TATGCGCCATTCTGAAGTTTACAGTTCTGGGATTTCTCTGCTTGAGCTAGAAAACAAGGAACGTATTGATGTCAAGGCTTTCAATTCTGATGGATCTTAC CACAAACTTTCAGCATTGTTGAACATGACTTCAGACAGAACAAAGGTGATTCATTTCCAGCCACACACAATGTTTGTTAATAGGGTTGGACGTAGTCTCT GCCTGCAGCAATGTGATTCTCAATCAGCTGTATGGATTCATCCTACTGATCCTCCAAAACCTTTTGAGTGGCAGTCATCAGCTAAAGTTGAACTTTTGAA GTTGCGGATTGATGGCTACAAATGGAGTATGCCATTTAGTGTTAGCTATGAAGGTGTAATGCGGATTAGCTTGAAAAAAGATGTTGGGAATGACTCTATG CAATTAAGGGTATCAGTAAGAAGTGGTGCCAAGAGATCACGCTTTGAAGTTATTTTTCGTCCAAATTCATTGTCAAGTCCTTACAGGATTGAAAATCGCT CCATGTTCTTGCCCATCCGCTTTCGCCAAGTTGACGGTCTTGGTGATTCCTGGCAGCTGCTTCTTCCGAATTCAGCTGCTTCATTTTTGTGGGAAGATCT TGGTAGAAGACGTTTGTTGGAACTGTTGGTAGATGGTACTGACCCAATGAAATCACTGAAGTATGATATTGATGAAATTTCTGATAATGAGCCCATCAGT GCAGCAGATGGACCAACAAGAGCCTTGCGTGTTACTATTGTAAAGGAAGAGAAAATCAATGTTGTTAAGATCAGTGACTGGATGCCAGAAACCGAACCTG CAGGAGTTCTGGGCAGAAGGAATTTATCATCAATGGGTGACTCTCAAAAGCAACAACTAATGTCAGCTACAGATGCTGAATTCCACATCAATTTTGATCT TGCAGAGCTTGGAATATCTATTATAGATCATACGCCTGAGGAAATTTTATACTTGTCTGTTCAGAATCTTGTTATGGCATACTCAACTGGTTTGGGATCT GGAATTAGTAGATTTAAACTCAGAATGACCGGGTTACAGGTGGACAATCAATTGCCGTTAACTCCAATGCCGGTTCTATTCAGGCCACAGAAAGCTGTGG CAGAAACTGATTATATCCTGAAATGTTCTGTGACAATGCAGTCAAATGGATCGTTGGATCTTTGTGTCTATCCATACATTGGTCTTCATGGGCCAGAAAG TTCTTCTGCCTTTTTGGTAAACATTCATGAACCTGTTATTTGGCGCCTTCATGAAATGATCCAACAGGTGAAGCTCAGTAGGCTGTACGATTCTCAAATA ACTGCTGCATCAGTTGATCCAATCATTCAAATTGGCGTGCTTAATATGTCTGAAGTTCGACTCAGAGTGTCAATGGCTATGTCACCCAGTCAAAGACCAA GGGGTGTGCTTGGGTTCTGGGCATCCTTAATGACTGCATTGGGTAACACAGAAAATATGCCTGTCAGGATAAACCAGAGGTTTCATGAGAACATTACTAT GAGGCAGAGTGCTATGATTAGCATGGCAACTTCAAACATCCAGAAGGATCTTCTTGGCCAACCACTTCAGCTTCTCTCAGGTGTTGATATACTGGGCAAT GCAAGTAGTGCACTTGGACATATGAGTAAAGGTGTGGCTGCATTGTCTATGGACAAAAAGTTCATTCAAAGTCGGCAGAGACAGGAAAACAAAGGTGTGG AGGATTTTGGTGATGTTATTAGAGAGGGAGGTGGAGCATTTGCTAAAGGTTTATTTAGAGGGGTAACTGGCATTTTAACAAAGCCTCTTGAAGGAGCAAA AACTTCTGGTGTTGAGGGTTTTGTTCAGGGTTTTGGGAAAGGTATTATCGGTGTGGCTGCACAACCAGTGAGTGGAGTTCTGGATCTTCTTTCAAAAACG ACCGAAGGTGCTAATGCTATGAGAATGAAAATTGCATCTGCTATAACATCTGATGAACAACTTCTCCGGAGGAGATTGCCTCGCGTTATAAGTGGTGATA ATTTGCTTCGACTATATGATGATTACAAAGCTCAAGGACAGGTCATATTGCAGTTGGCAGAATCAGGTTCTTTTTTCAGCCAGGTTGATCTTTTCAAAGT TCGGGGAAAATTTGCCCTAACGGATGCTTATGAAGATCACTTCATGCTTCCGAAAGGGAAAGTTCTAATTGTCACTCATGGAAGAGTCATACTATTGCAA CAACCATCTAATATTATCGCTCAGAGGAAGTTCATCCCTGCAAGGGATCCTTGTTCAATACTTTGGGATATAATGTGGGATGACCTCGGTACAATGGAAC TGACACATAGAAAAAAAGACAACCCAAAAGGTCTACCTTCACAACTCATCTTATATTTGCAATCTAGATCAATGGATATGAAAGAAAATGTTCGAATAGT AAAATGCACCCCTGAATCCCATCAAGCGCTTGAAGTTTACTCTTCAATTGAGCATGCATTGAGTACTTATGGCCCAGGTGCATCAAAGGGAATACTGAAA AATAAAGTGACAAAACCATATTCACCACTTGCTGCTGATGGTCCTAGTTCTGGTG
• Tissue: pods
• Gene name: LI_gene_195391;
• Additional information: details;

Expression of Ll_transcript_480967

FPKM

• PAB: 0.5
• PNAB: 2.9
• PS1: 3.6
• PS2: 2.8
• PS3: 3.4
• PW1: 1.7
• PW2: 3.2
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480967

• Blastp: Vacuolar protein sorting-associated protein 13C from Mus with 34.63% of identity
• Blastx: Vacuolar protein sorting-associated protein 13C from Mus with 34.63% of identity
• Eggnog: Vacuolar Protein(COG5043)
• Kegg: Link to kegg annotations (320528)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431161.1)
• Pfam: Vacuolar protein sorting-associated protein 62 (PF06101.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;