Ll_transcript_480968

• Id Trinity: TRINITY_DN52764_c1_g1_i4
• Name Transcript: Ll_transcript_480968
• Sequence: TATGACTTCTTTATCAGAGACAGACCTATTTGTGACTATTCCAAAATTCTCCATACTAGATGTCCGCCCCAATACCAAACCTGAAATGCGTCTAATGCTT GGATCATCTTCTGATGCTTCCAAACAAACTGTTACTGGAAAGGTTCCTTTTCCATTTAACACCGGTAGCTTTAGGAGGACATCCAGTGAAGTTAAAATTG ACGTTGACATGCCAATTTCAACAATGTTCTTGATGGACTACAGGTGGAGGATGTCATCCCAATCATTTGTGATTCGTGTGCAGCAACCTCGGGTTCTTGT TGTGCCAGATTTTGTTATTGGAGTGGCTGAATTTTTTGTGCCTGCTCTAGGAGCACTCACTGGAAGAGAGGAAACAATGGATCCGAAGAATGATCCTATT AGCAGAACCAGCAACGTAGTGCTAATGGAATCAGTTTACAAGCAGACAGAAGATGTGGTACACCTCTCCCCATCAAAACAGTTAGTGGCTGATTGTGTAG GCATTGATGAATATACTTATGATGCTTGTGGAAAGACTATCTGTTTATCCATTGAAACTGATGCAAGGGATGTCAGGAGCACAAGGTTCAGACCAATTAT AGTTATTGGACACGGCAAGAGATTGCGATTTATGAATGTAAAAATTGAGAATGGTTTTCTACTAAGAAAGTATACGTACCTGAGTTATGATAGCAGCTAC TCAATCTCTACTGAAGATGGAGTTGACATTGTGTTGGAAGACAATTTGCCATCTGGTGACGAGAAAAGACTCATGAATCAAACATCAGGCACTTCTGTAT ATTCTCAAAGTGAATCGATTGGAACTCAAAGTTTTAGCTTTGAAACCCAGGTTGTTTCTTCAGAGCTCACCTTCTATGATGGTTCCAAGTCGTTTCTGGA TGATTCATCCTATGGCGAGAAGCTTATTCGCGCAAAGTTGGACCTGAGCTTCATGTATGCCTCCAAGGAAAAGGATACTTGGATTAGAGCTCTGGTGAAG GATTTTACTCTTGAGGCTGGTTCTGGTCTTATCATTCTAGATCCAGTGGATATATCAGGGGGGTACACTTCTGTGAAGGGAAGAACAAATATTTCTTTGC TATCAACAGACATTTGTATTCATCTTTCACTTAGTGCTGTTTCCCTTATACTCAATCTGCAAAGTCAGGCATCTTCTGCATTAAGTTTCGGAAATGCAAC TGCCCTGGTTCCGTGCACCAACTTTGACCGAATTTGGGTTTCTGGAAAAGGGACTAGTCCAGACAATATCACCTTTTGGAGGCCTCGAGCACCTGCCAAT TATGTTGTATTAGGGGATTGTGTGACATCAAGATCAATTCCTCCGTCACAAGCAGTAATGGCAGTAACTAACATGTATGGGCGTGTAAGGAAGCCAGTTG GTTTCCATCTTATTGGGTCATTCCTGGACATTCAAGGGGATGTTGGAGGTGAAGAACATTCTGTTGATGACAGTGATTGTTCTCTTTGGATGCCCATTGC ACCCCCAGGTTACACAGCATTGGGCTGTGTAGCCCATGTTGGGAACCAACCACCACCAAATCATATCGTTCATTGCTTACGTTCTGATCTTTTAACATCA ACAAAATGTTCAGACTGCTTATTTAATATGCCGCCGAATAATCAATTAACATCTGGATTTAGCATATGGCGCCTTGATAATGCTATTGGCTCATTTTTGG CGCATTCTTCAACTGGTTGCCCCCTGAATGATAAATGTTATAACTTAAATCATTTGCTCGTCTGGAATTCAAATAGGGTTCCTCTGATAGGTTCAGTCTC AGATTTTAATTCTGATCCTGAAAATAATAATCAACAGACAAGCAAAAGTGTGAACACATCAGGATGGGATATCCTCAAGTCCATTTCAAAAGCCACTAAC TGCTATATGTCCACACCGAACTTTGAAAGAATTTGGTGGGACAAAGGTAGTGACCTCCGTCGTCCAGTCTCTATTTGGCGACCTATTGCACGTCGTGGTT ATGCAGTCGTGGGTGATTGCATCACTGAAGGAGTAGAACCTCCTGCGCTAGGCATAATCTTCAAGAATGATAATCCTGATATCTCTTCAAAACCTGTTCA ATTTACCAAAGTTTCCCATATTGTTGGGAAAGGAGTTGAAGAAGTTTTCTTCTGGTATCCTATAGCTCCCCCTGGTTATGTTTCTCTAGGGTGTGTAGTC ACAAGAACAGATGAAGCACCACATGCAGATTTGTTTTGTTGCCCGAGGATGGATCTTGTTAGCCAAGCAAGCATTCATGAGTTGCCTCTCTCGAGATCTT CAAGCTCACGGGCTCCTCAGTGCTGGAGCATATGGAAAGTAGAAAATCAGGCATGCACTTTTTTGGCTCGTTCCGACCTTAAAAAACCATCAAGCCGATT AGCCTACATAATTGGTGATTACGTGAAGCCGAAGACTCGGGAAAACATAAATGCTGAACTGAAGCTGAGATTCTTTTCTATAACGATTTTGGACAGCTTA TGTGGAATGATGAGACCCCTATTTGACACAACAATTACCAATATTAAGCTTGCAACACATGGTGGACTTGAAGGGATGAATGCAGTAGTGATTTCTTCAA TTGTTGCATCAACCTTCAATGCACAATTAGAGGCATGGGAGCCCCTTGTGGAGCCATTTGATGCCATATTCAAGTTTGAAACTTATGATAACACTGCACA AGCACCATTAGGGCTTGGGAAAAGAGTTCGAATTTCTGCTACCAGCATCTTGAATGTAAATGTCAGCGCAGCAAATCTCGAATCCTTTGTGGGAAGCATT CTATCATGGAGAAGACAATTAGAGCTTGAACAAAAAGCATCAAAGCTAAATACGGGGGTTAGTGGTCCAAAAAGCAAGGGAGATGATGCAACTTTTTCTG CACTAGATGAGGATGACTTGCAGACTGTGATATTAGAAAATAAACTAGGGTGTGATATTTTTGTCAAAAAAGTTGAGCATGACGTGGACATAGTTGACAA GCTACATCACGATGATTGTACTTCTGTGTGGATTCCACCTCCTAGATTTTCAGATAGGTTAAATGTTGCAGATGAATCTAGAGAAGCACGATATTATATT GCTGTACAGATGCTTGAGGCCAAGGGTTTACCTGTCGTTGATGATGGTAACAGTCATAACTTCTTCTGTGCTTTGCGCCTCGTCATTGACAGTCAGGCAT CAGAGCAACAAAAGCTTTTTCCTCAAAGTGCAAGAACAAAGTGTGTTAAGCCTGTAGTATCAAGAATTAATGGTCGGGATGAAGGCACAGTGAAATGGAA TGAACTTTTCATATTTGAAGTTCCTCGAAAGGCCCCTGCGAAATTGGAAATAGAGGTTACCAACCTAGCTGCAAAAGCTGGAAAAGGAGATGTTGTGGGT TCGCTTTCATTTTCTGTTGGGCATGGTGCAAATGTTCTAAGGAAGGTTTCTTCTGTGAGATTGTTTCACCAACCATGTGAATTTCAGAATATTAGAACAT TCCCACTTAGTAGAATGGTTGAACAAAGTAACGTTGGAGCCATGCACAATGGGCGCCTCTTTGTTTCGACTTCTTATTTTGAAAGAAACACAATTGCTAA AATTCAAAAAGATATGGAAAATGAGAATGTTGTTGATAGAGACATAGGTTTTTGGGTAGGGCTTAGCCCTGAGGGTAAGTGGGAGACTGTTCGGTCATTG CTTCCACTGTCAGTGGTTCCAAAATCATTAAATAATGAATACATTGGTATGGAAGTTGTTATGAAAAATGGAAAGAAACATGTAGTTTTCAGGAGTCTTG TTACAGTAGTGAATGATTCAGATGTTGTGTTAAATATTATGCCATCCCATGCATCTCATGGTACTGATCCCTTACTAGGGGCAAACAGTACTAATACTGT TGTTGAAGAGGTCTTCCAAAATCAATGTTATTCGTCATCTGGTTGGGGTAACGATTGGCCTGCTGTGCACCTTGATAATCCTGGTCACTGGAGCACAAGG GACTTCTCATACTCATCTAAGGATTTCTTTGAACCTCCACTTCCTCCTGGATGGAAATGGGCGTCGGGTTGGTCCATAGATAAGTTTCAGTATGTTGACA AAGAAGGCTGGGCCTACGGGCCTGACCTTAAAAACTTAAAATGGCCTCCTACTTCTTCAAAGTTTTCAACAAAATCAGCTTCTGATAATGTGCGTCGAAG ACGCTGGATTTGTACTAGAGAGACCATTTCTGAGGAAGGTATTGAGTGCTTGCACAGCGGAGCAAGTACAGTGCACCCTAGGGCTTCTGCAGTTTTATCT TGGAGATGTACGTCAAAGGACTCAAACCAATATTTGCAAGTTCGACCTAACTTCAATAGCTCGCAACCCTCCTACTCATGGGGTCGTGCTGTAGCTATTG GTTCAAGTTACATATATAGCAAAGACAACCTATTAGATCCAGGTTCTAGACAAAATTCTGTGACGCACAATTGTTCTTTGAAGCTAAATGAGCTTGAGAA AAAGGATATACTTCTGTGTTGTAATCCTAGTAGTGGGAGTAAACAATTATGGTTTAGTGTGAGTTCAGATGCCACAGTTCTTAATACTGCACTAAATGTT CCTGTATATGATTGGAAAATATCTATTAACTCTCCTATGAAATTGGAGAACCGGCTTCCTTGTCCTGCTGAATTTTCAATCTTGGAGAAAACTAAGGAAG GAAATTGTGTTGAGCGGCATCATGGTGTCATATCTTCTCGTCAGAGTGTACATATCTATTCAGCTGATATTCAGAAACCTGTGTATCTAACTTTGTTTGT GCAGGGTGGTTGGGTTATGGAAAAGGACTCTATTCTTGTTTTGGATCCTTCTTTCTCTAATCGCTTCTCATATTTCTGGATGGTTCACCGGCAAAGTAGA AGGAAATTGCGAGTGAGCGTTGAACATGATATGGGGGGAACAAGTGCTGCCCAAAAAACCTTGAGGATTTTTGTCCCTTACTGGATTGTCAATGACTCTT CTCTTGCTTTGGCATATCGTGTGGTAGAAGTGGAACCTTCGGAAAATGCAGAGATAGATTCTGCCCATCTCTCTAGAGCAGTTAAGTCTGCCAAAACAGC CTTGAAAAGCCCCATCATCTCAATGGATAGAAGGCATTCTACTTCAAGGAGAAATCTCCAAGTACTTGAAGTAATTGAAGACAACAGTCCATTGCCTAGT ATGCTTTCTCCACAAGATTATGCTGGTCGTAGTGGAGTTACAATGTTTCAATCTCAAAAAGATACATATTTGTCACCAAGGGTGGGCATTTCTGTTTCAT TGCGGCGTTCAGAAGTTTACAGCCCTGGGATTTCTCTGCTTGAACTGGAAAACAAGGAACGCATTGATGTCAAGGCTTTCAATTCTGATGGATCTTACTA CAAGCTTTCAGCATTGTTGAACATGACCTCAGACAGAACAAAGGTGGTTCATTTCCAACCACACACAATGTTCGTTAATAGGGTTGGATGTAGTCTCTGC CTGCAGCAATGTGATTCTCAGTCAGTTGTATGGGTACATCCTACTGACCCTCCAAAACCTTTTGAGTGGCAGTCATCAATCAGAGTTGAACTTTTGAAGT TGCGGGTTGATGGCTATAAATGGAGTACACCATTTAGTGTTAGCTATGAAGGTGTAATGCGCATTAACTTGAAAAAAGATGATGGAGGTGACTCAATGCA ATTAAGGGTTGCAGTAAGAAGTGGTGCCAAGAGATCACGCTTTGAAGTTATTTTTCGTCCAAATTCATTGTCAAGTCCTTACAGGATTGAAAATCGCTCC ATTTTATCGCCCATCCACTTTCGCCAAGTTGACGGTGTTGGTGATTCCTGGCAGCTGCTCCTTCCGAATTCAGCTGCTTCATTTTTGTGGGAAGATCTTG GTAGAAGACGTTTGTTGGAACTCTTTGTAGATGGTACTGAGCCAAGGCAATCACTGAAGTATGATATTGATGAAATTTCTGATCATGAGCCCGTAAGTTC AGCAGATGGACCAACCAGAGCCTTGCGTGTTACTATTGTAAAGGAAGAGAAAATCAATGTTGTTAAGATCAGTGATTGGATGCCAGAAACTGAACCTGCA GGAGTTCTGGGTAGGAGGAATTTATCATCAATGAGTGACAATCAAAAGCAACAACTAATGTCAATTACAAATTCTGAATTCCACATTAATTTTGATCTTG CTGAGCTTGGGATATCTGTTATAGATCATACGCCTGAGGAAATTTTATACATGTCTGTTGAGAATCTTGTTCTGGCATATTCAACTGGTCTGGGATCCGG AATTAGTAGATTTAAACTCAGAATGACCGGGTTACAGGTGGACAATCAATTGCCGTTAACTCCAATGCCGGTTCTATTCAGGCCACAGAAAGCTGTGGCA GAAACTGATTATATCCTGAAATGTTCTGTGACAATGCAGTCAAATGGATCGTTGGATCTTTGTGTCTATCCATACATTGGTCTTCATGGGCCAGAAAGTT CTTCTGCCTTTTTGGTAAACATTCATGAACCTGTTATTTGGCGCCTTCATGAAATGATCCAACAGGTGAAGCTCAGTAGGCTGTACGATTCTCAAATAAC TGCTGCATCAGTTGATCCAATCATTCAAATTGGCGTGCTTAATATGTCTGAAGTTCGACTCAGAGTGTCAATGGCTATGTCACCCAGTCAAAGACCAAGG GGTGTGCTTGGGTTCTGGGCATCCTTAATGACTGCATTGGGTAACACAGAAAATATGCCTGTCAGGATAAACCAGAGGTTTCATGAGAACATTACTATGA GGCAGAGTGCTATGATTAGCATGGCAACTTCAAACATCCAGAAGGATCTTCTTGGCCAACCACTTCAGCTTCTCTCAGGTGTTGATATACTGGGCAATGC AAGTAGTGCACTTGGACATATGAGTAAAGGTGTGGCTGCATTGTCTATGGACAAAAAGTTCATTCAAAGTCGGCAGAGACAGGAAAACAAAGGTGTGGAG GATTTTGGTGATGTTATTAGAGAGGGAGGTGGAGCATTTGCTAAAGGTTTATTTAGAGGGGTAACTGGCATTTTAACAAAGCCTCTTGAAGGAGCAAAAA CTTCTGGTGTTGAGGGTTTTGTTCAGGGTTTTGGGAAAGGTATTATCGGTGTGGCTGCACAACCAGTGAGTGGAGTTCTGGATCTTCTTTCAAAAACGAC CGAAGGTGCTAATGCTATGAGAATGAAAATTGCATCTGCTATAACATCTGATGAACAACTTCTCCGGAGGAGATTGCCTCGCGTTATAAGTGGTGATAAT TTGCTTCGACTATATGATGATTACAAAGCTCAAGGACAGGTCATATTGCAGTTGGCAGAATCAGGTTCTTTTTTCAGCCAGGTTGATCTTTTCAAAGTTC GGGGAAAATTTGCCCTAACGGATGCTTATGAAGATCACTTCATGCTTCCGAAAGGGAAAGTTCTAATTGTCACTCATGGAAGAGTCATACTATTGCAACA ACCATCTAATATTATCGCTCAGAGGAAGTTCATCCCTGCAAGGGATCCTTGTTCAATACTTTGGGATATAATGTGGGATGACCTCGGTACAATGGAACTG ACACATAGAAAAAAAGACAACCCAAAAGGTCTACCTTCACAACTCATCTTATATTTGCAATCTAGATCAATGGATATGAAAGAAAATGTTCGAATAGTAA AATGCACCCCTGAATCCCATCAAGCGCTTGAAGTTTACTCTTCAATTGAGCATGCATTGAGTACTTATGGCCCAGGTGCATCAAAGGGAATACTGAAAAA TAAAGTGACAAAACCATATTCACCACTTGCTGCTGATGGTCCTAGTTCTGGTG
• Tissue: pods
• Gene name: LI_gene_195391;
• Additional information: details;

Expression of Ll_transcript_480968

FPKM

• PAB: 0.6
• PNAB: 3.1
• PS1: 4.7
• PS2: 3.9
• PS3: 4.5
• PW1: 2
• PW2: 3.4
• PW3: 4.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_480968

• Blastp: Vacuolar protein sorting-associated protein 13C from Mus with 34.63% of identity
• Blastx: Vacuolar protein sorting-associated protein 13C from Mus with 34.63% of identity
• Eggnog: Vacuolar Protein(COG5043)
• Kegg: Link to kegg annotations (320528)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418850.1)
• Pfam: Vacuolar protein sorting-associated protein 62 (PF06101.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;