| Id Trinity | TRINITY_DN52764_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_480970 |
| Sequence | TATCGTATGACCTCTTTATCAGAGAGTGATCTGTTCGTAACTATTCCGAAATTTTCCATACTAGATGTCCGCCCTGATACGAAACCTGAAATGCGTCTAA TGCTTGGATCATCTTCTGATGCTTCCAAACAAACAGTTACTGGAAAAGTTCCTTTTCCATTTAACCCAGGTAGCTTTAGGAGGACATCCAGTGAAGCTAG AGTTGAAACTGACATGCCAATTTCAACAATGTTCTTGATGGACTACAGGTGGAGGATGTCATCCCAATCATTTGTGATTCGTGTGCAGCAACCTCGGGTC CTTGTTGTGCCAGATTTCCTTCTTGCTGTGGCTGAGTTTTTCGTGCCTTCTCTAGGAGCGCTAACTGGAAGAGAGGAAATGACGGATCCAAAGAACGATC CTATTAGCAGAAATAGTAGCATAATGCTAATGGAATCAGTATACAAGCAGACAGAAGATGTGGTTCACCTCTCCCCATCAAAACAGTTAGTTGCAGATTG TGTAGGCATTGATGAATATACATATGATGGTTGTGGAAAGACTATTTATTTATCTGTTGAAACTGATGAAAAGGAAGTTCGGAGCTCAAGGTTTAGACCA ATTATAGTCATTGGACATAGTAAGAGATTGCGATTTATTAACGTAAAAATTGAGAATGGTTCACTATTAAGAAAGTATACGTACCTGAGTTATGATAGCA GCTACTCAATCTCTATTGAAGACGGTGTTGACATTGTGTTGCATGACAATTTTCCATCTGCTGATGAGAAAAGTCTTACGAATCAAACATCATGCACTTC TGTATATTCTCAAAGTGAAGTGAGTGGAACTGAAAGTTTTAGCTTTGAAACTCAGGTTGTTTCTTCAGAGCTCACCTTCTACGATGGTTCTAAGTCCTTT CTGGATGATTCATCCTATGGGGAGAAGCTTATTCGTGCAAAGTTGGACATGAGCTTCATGTATGCCTCCAAGGAAAAGGACACTTGGATTAGAGCTCTGG TTAAGGATTTTACTCTTGAGGCTGGTTCTGGTCTTATCATTCTAGATCCAGTGGATATATCAGGGGGGTATACTTCTGTGAAGGACAGAACAAATATTTC TTTGCTATCAACAGACATTTGTATTCATCTTTCACTTAGTGCTGTTTCCCTTATACTCAATCTGCAAAGTCAGGCATCTGCTGCATTAAATTTTGGAAAT GCAACTCCCCTTGTTCCGTGCACCAACTTTGACCGAGTTTGGGTTTCTGGAAAAGGAACTGGTCCAGACAATATCACCTTTTGGAGGCCTCGAGCACCTG CCAATTATGTTGTATTAGGAGATTGTGTGACATCAAGGCCAATTCCTCCATCACAGGCTGTAATGGCAGTATGTAACACATATGACCGTGTAAGGAAGCC TGTTGATTTCTATCTTATTGGGTCATTCCTGGACATTCAAGGGCATGGTGGAGGTGAAGGACATTCTGTTGCTGACAATGATTGTTCTCTTTGGATGCCC ATTGCACCCTCAGGTTACACAGCACTGGGCTGTGTAGCCCATGTCGGGAACCAACCACCACCGAATCATGTTGTTCATTGCTTACGCTCTGATCTCGTAA CATCAGCAAAATATTCAGACTGCTTATTTAATATCCTGCCAAATAATAAATTTACCTTTGGATTTAGCATATGGCGCCTTGATAATGCTATTGGCTCATT TTTGGCACATTCCTCAACTGGTTGCCCCCTGTATGACAAATGTTATAACTTAAACCATCTGCTTGTCTGGAATTCAAATCGAGCACCTTTGATAAGTTCA GTCCCAGATTTCAGTTCAGATCATGAAAATAACAATCAGCAGACAAGTAAAAGTGCGAACACATCAGGATGGGATATCCTCAAGTCCATTTCAAAAGCAA CTAACTGTTATATGTCTACACCAAACTTTGAAAGAATTTGGTGGGACAAAGGTAGTGACCTCCGTCGTCCAGTCTCTATTTGGCGACCTATTGCACGTCG TGGTTATGCAGTCGTGGGTGATTGCATCACTGAAGGAGTAGAACCTCCTGCGCTAGGCATAATCTTCAAGAATGATAATCCTGATATCTCTTCAAAACCT GTTCAATTTACCAAAGTTTCCCATATTGTTGGGAAAGGAGTTGAAGAAGTTTTCTTCTGGTATCCTATAGCTCCCCCTGGTTATGTTTCTCTAGGGTGTG TAGTCACAAGAACAGATGAAGCACCACATGCAGATTTGTTTTGTTGCCCGAGGATGGATCTTGTTAGCCAAGCAAGCATTCATGAGTTGCCTCTCTCGAG ATCTTCAAGCTCACGGGCTCCTCAGTGCTGGAGCATATGGAAAGTAGAAAATCAGGCATGCACTTTTTTGGCTCGTTCCGACCTTAAAAAACCATCAAGC CGATTAGCCTACATAATTGGTGATTACGTGAAGCCGAAGACTCGGGAAAACATAAATGCTGAACTGAAGCTGAGATTCTTTTCTATAACGATTTTGGACA GCTTATGTGGAATGGTTTGTTTTCTATGACTATTATGAAAAGAACTGGCATTCTTTTCAAAATTATTTACCATTGATGAATTTTTTGATAAAGAGGTATT CTTTTTTGCAATTCCAATGGTGAATTCAACTACCATTTCAGATGAGACCCCTATTTGACACAACAATTACCAATATTAAGCTTGCAACACATGGTGGACT TGAAGGGATGAATGCAGTAGTGATTTCTTCAATTGTTGCATCAACCTTCAATGCACAATTAGAGGCATGGGAGCCCCTTGTGGAGCCATTTGATGCCATA TTCAAGTTTGAAACTTATGATAACACTGCACAAGCACCATTAGGGCTTGGGAAAAGAGTTCGAATTTCTGCTACCAGCATCTTGAATGTAAATGTCAGCG CAGCAAATCTCGAATCCTTTGTGGGAAGCATTCTATCATGGAGAAGACAATTAGAGCTTGAACAAAAAGCATCAAAGCTAAATACGGGGGTTAGTGGTCC AAAAAGCAAGGGAGATGATGCAACTTTTTCTGCACTAGATGAGGATGACTTGCAGACTGTGATATTAGAAAATAAACTAGGGTGTGATATTTTTGTCAAA AAAGTTGAGCATGACGTGGACATAGTTGACAAGCTACATCACGATGATTGTACTTCTGTGTGGATTCCACCTCCTAGATTTTCAGATAGGTTAAATGTTG CAGATGAATCTAGAGAAGCACGATATTATATTGCTGTACAGATGCTTGAGGCCAAGGGTTTACCTGTCGTTGATGATGGTAACAGTCATAACTTCTTCTG TGCTTTGCGCCTCGTCATTGACAGTCAGGCATCAGAGCAACAAAAGCTTTTTCCTCAAAGTGCAAGAACAAAGTGTGTTAAGCCTGTAGTATCAAGAATT AATGGTCGGGATGAAGGCACAGTGAAATGGAATGAACTTTTCATATTTGAAGTTCCTCGAAAGGCCCCTGCGAAATTGGAAATAGAGGTTACCAACCTAG CTGCAAAAGCTGGAAAAGGAGATGTTGTGGGTTCGCTTTCATTTTCTGTTGGGCATGGTGCAAATGTTCTAAGGAAGGTTTCTTCTGTGAGATTGTTTCA CCAACCATGTGAATTTCAGAATATTAGAACATTCCCACTTAGTAGAATGGTTGAACAAAGTAACGTTGGAGCCATGCACAATGGGCGCCTCTTTGTTTCG ACTTCTTATTTTGAAAGAAACACAATTGCTAAAATTCAAAAAGATATGGAAAATGAGAATGTTGTTGATAGAGACATAGGTTTTTGGGTAGGGCTTAGCC CTGAGGGTAAGTGGGAGACTGTTCGGTCATTGCTTCCACTGTCAGTGGTTCCAAAATCATTAAATAATGAATACATTGGTATGGAAGTTGTTATGAAAAA TGGAAAGAAACATGTAGTTTTCAGGAGTCTTGTTACAGTAGTGAATGATTCAGATGTTGTGTTAAATATTATGCCATCCCATGCATCTCATGGTACTGAT CCCTTACTAGGGGCAAACAGTACTAATACTGTTGTTGAAGAGGTCTTCCAAAATCAATGTTATTCGTCATCTGGTTGGGGTAACGATTGGCCTGCTGTGC ACCTTGATAATCCTGGTCACTGGAGCACAAGGGACTTCTCATACTCATCTAAGGATTTCTTTGAACCTCCACTTCCTCCTGGATGGAAATGGGCGTCGGG TTGGTCCATAGATAAGTTTCAGTATGTTGACAAAGAAGGCTGGGCCTACGGGCCTGACCTTAAAAACTTAAAATGGCCTCCTACTTCTTCAAAGTTTTCA ACAAAATCAGCTTCTGATAATGTGCGTCGAAGACGCTGGATTTGTACTAGAGAGACCATTTCTGAGGAAGGTATTGAGTGCTTGCACAGCGGAGCAAGTA CAGTGCACCCTAGGGCTTCTGCAGTTTTATCTTGGAGATGTACGTCAAAGGACTCAAACCAATATTTGCAAGTTCGACCTAACTTCAATAGCTCGCAACC CTCCTACTCATGGGGTCGTGCTGTAGCTATTGGTTCAAGTTACATATATAGCAAAGACAACCTATTAGATCCAGGTTCTAGACAAAATTCTGTGACGCAC AATTGTTCTTTGAAGCTAAATGAGCTTGAGAAAAAGGATATACTTCTGTGTTGTAATCCTAGTAGTGGGAGTAAACAATTATGGTTTAGTGTGAGTTCAG ATGCCACAGTTCTTAATACTGCACTAAATGTTCCTGTATATGATTGGAAAATATCTATTAACTCTCCTATGAAATTGGAGAACCGGCTTCCTTGTCCTGC TGAATTTTCAATCTTGGAGAAAACTAAGGAAGGAAATTGTGTTGAGCGGCATCATGGTGTCATATCTTCTCGTCAGAGTGTACATATCTATTCAGCTGAT ATTCAGAAACCTGTGTATCTAACTTTGTTTGTGCAGGGTGGTTGGGTTATGGAAAAGGACTCTATTCTTGTTTTGGATCCTTCTTTCTCTAATCGCTTCT CATATTTCTGGATGGTTCACCGGCAAAGTAGAAGGAAATTGCGAGTGAGCGTTGAACATGATATGGGGGGAACAAGTGCTGCCCAAAAAACCTTGAGGAT TTTTGTCCCTTACTGGATTGTCAATGACTCTTCTCTTGCTTTGGCATATCGTGTGGTAGAAGTGGAACCTTCGGAAAATGCAGAGATAGATTCTGCCCAT CTCTCTAGAGCAGTTAAGTCTGCCAAAACAGCCTTGAAAAGCCCCATCATCTCAATGGATAGAAGGCATTCTACTTCAAGGAGAAATCTCCAAGTACTTG AAGTAATTGAAGACAACAGTCCATTGCCTAGTATGCTTTCTCCACAAGATTATGCTGGTCGTAGTGGAGTTACAATGTTTCAATCTCAAAAAGATACATA TTTGTCACCAAGGGTGGGCATTTCTGTTTCATTGCGGCGTTCAGAAGTTTACAGCCCTGGGATTTCTCTGCTTGAACTGGAAAACAAGGAACGCATTGAT GTCAAGGCTTTCAATTCTGATGGATCTTACTACAAGCTTTCAGCATTGTTGAACATGACCTCAGACAGAACAAAGGTGGTTCATTTCCAACCACACACAA TGTTCGTTAATAGGGTTGGATGTAGTCTCTGCCTGCAGCAATGTGATTCTCAGTCAGTTGTATGGGTACATCCTACTGACCCTCCAAAACCTTTTGAGTG GCAGTCATCAATCAGAGTTGAACTTTTGAAGTTGCGGGTTGATGGCTATAAATGGAGTACACCATTTAGTGTTAGCTATGAAGGTGTAATGCGCATTAAC TTGAAAAAAGATGATGGAGGTGACTCAATGCAATTAAGGGTTGCAGTAAGAAGTGGTGCCAAGAGATCACGCTTTGAAGTTATTTTTCGTCCAAATTCAT TGTCAAGTCCTTACAGGATTGAAAATCGCTCCATTTTATCGCCCATCCACTTTCGCCAAGTTGACGGTGTTGGTGATTCCTGGCAGCTGCTCCTTCCGAA TTCAGCTGCTTCATTTTTGTGGGAAGATCTTGGTAGAAGACGTTTGTTGGAACTCTTTGTAGATGGTACTGAGCCAAGGCAATCACTGAAGTATGATATT GATGAAATTTCTGATCATGAGCCCGTAAGTTCAGCAGATGGACCAACCAGAGCCTTGCGTGTTACTATTGTAAAGGAAGAGAAAATCAATGTTGTTAAGA TCAGTGATTGGATGCCAGAAACTGAACCTGCAGGAGTTCTGGGTAGGAGGAATTTATCATCAATGAGTGACAATCAAAAGCAACAACTAATGTCAATTAC AAATTCTGAATTCCACATTAATTTTGATCTTGCTGAGCTTGGGATATCTGTTATAGATCATACGCCTGAGGAAATTTTATACATGTCTGTTGAGAATCTT GTTCTGGCATATTCAACTGGTCTGGGATCCGGAATTAGTAGATTTAAACTCAGAATGACCGGGTTACAGGTGGACAATCAATTGCCGTTAACTCCAATGC CGGTTCTATTCAGGCCACAGAAAGCTGTGGCAGAAACTGATTATATCCTGAAATGTTCTGTGACAATGCAGTCAAATGGATCGTTGGATCTTTGTGTCTA TCCATACATTGGTCTTCATGGGCCAGAAAGTTCTTCTGCCTTTTTGGTAAACATTCATGAACCTGTTATTTGGCGCCTTCATGAAATGATCCAACAGGTG AAGCTCAGTAGGCTGTACGATTCTCAAATAACTGCTGCATCAGTTGATCCAATCATTCAAATTGGCGTGCTTAATATGTCTGAAGTTCGACTCAGAGTGT CAATGGCTATGTCACCCAGTCAAAGACCAAGGGGTGTGCTTGGGTTCTGGGCATCCTTAATGACTGCATTGGGTAACACAGAAAATATGCCTGTCAGGAT AAACCAGAGGTTTCATGAGAACATTACTATGAGGCAGAGTGCTATGATTAGCATGGCAACTTCAAACATCCAGAAGGATCTTCTTGGCCAACCACTTCAG CTTCTCTCAGGTGTTGATATACTGGGCAATGCAAGTAGTGCACTTGGACATATGAGTAAAGGTGTGGCTGCATTGTCTATGGACAAAAAGTTCATTCAAA GTCGGCAGAGACAGGAAAACAAAGGTGTGGAGGATTTTGGTGATGTTATTAGAGAGGGAGGTGGAGCATTTGCTAAAGGTTTATTTAGAGGGGTAACTGG CATTTTAACAAAGCCTCTTGAAGGAGCAAAAACTTCTGGTGTTGAGGGTTTTGTTCAGGGTTTTGGGAAAGGTATTATCGGTGTGGCTGCACAACCAGTG AGTGGAGTTCTGGATCTTCTTTCAAAAACGACCGAAGGTGCTAATGCTATGAGAATGAAAATTGCATCTGCTATAACATCTGATGAACAACTTCTCCGGA GGAGATTGCCTCGCGTTATAAGTGGTGATAATTTGCTTCGACTATATGATGATTACAAAGCTCAAGGACAGGTCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_195391; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_480970
| Blastp | Vacuolar protein sorting-associated protein 13C from Homo with 40.54% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 13C from Mus with 39.86% of identity |
| Eggnog | Vacuolar Protein(COG5043) |
| Kegg | Link to kegg annotations (54832) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418850.1) |
| Pfam | C2 domain (PF00168.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |