| Id Trinity | TRINITY_DN52764_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_480974 |
| Sequence | TATGACTTCTTTATCAGAGACAGACCTATTTGTGACTATTCCAAAATTCTCCATACTAGATGTCCGCCCCAATACCAAACCTGAAATGCGTCTAATGCTT GGATCATCTTCTGATGCTTCCAAACAAACTGTTACTGGAAAGGTTCCTTTTCCATTTAACACCGGTAGCTTTAGGAGGACATCCAGTGAAGTTAAAATTG ACGTTGACATGCCAATTTCAACAATGTTCTTGATGGACTACAGGTGGAGGATGTCATCCCAATCATTTGTGATTCGTGTGCAGCAACCTCGGGTTCTTGT TGTGCCAGATTTTGTTATTGGAGTGGCTGAATTTTTTGTGCCTGCTCTAGGAGCACTCACTGGAAGAGAGGAAACAATGGATCCGAAGAATGATCCTATT AGCAGAACCAGCAACGTAGTGCTAATGGAATCAGTTTACAAGCAGACAGAAGATGTGGTACACCTCTCCCCATCAAAACAGTTAGTGGCTGATTGTGTAG GCATTGATGAATATACTTATGATGCTTGTGGAAAGACTATCTGTTTATCCATTGAAACTGATGCAAGGGATGTCAGGAGCACAAGGTTCAGACCAATTAT AGTTATTGGACACGGCAAGAGATTGCGATTTATGAATGTAAAAATTGAGAATGGTTTTCTACTAAGAAAGTATACGTACCTGAGTTATGATAGCAGCTAC TCAATCTCTACTGAAGATGGAGTTGACATTGTGTTGGAAGACAATTTGCCATCTGGTGACGAGAAAAGACTCATGAATCAAACATCAGGCACTTCTGTAT ATTCTCAAAGTGAATCGATTGGAACTCAAAGTTTTAGCTTTGAAACCCAGGTTGTTTCTTCAGAGCTCACCTTCTATGATGGTTCCAAGTCGTTTCTGGA TGATTCATCCTATGGCGAGAAGCTTATTCGCGCAAAGTTGGACCTGAGCTTCATGTATGCCTCCAAGGAAAAGGATACTTGGATTAGAGCTCTGGTGAAG GATTTTACTCTTGAGGCTGGTTCTGGTCTTATCATTCTAGATCCAGTGGATATATCAGGGGGGTACACTTCTGTGAAGGGAAGAACAAATATTTCTTTGC TATCAACAGACATTTGTATTCATCTTTCACTTAGTGCTGTTTCCCTTATACTCAATCTGCAAAGTCAGGCATCTTCTGCATTAAGTTTCGGAAATGCAAC TGCCCTGGTTCCGTGCACCAACTTTGACCGAATTTGGGTTTCTGGAAAAGGGACTAGTCCAGACAATATCACCTTTTGGAGGCCTCGAGCACCTGCCAAT TATGTTGTATTAGGGGATTGTGTGACATCAAGATCAATTCCTCCGTCACAAGCAGTAATGGCAGTAACTAACATGTATGGGCGTGTAAGGAAGCCAGTTG GTTTCCATCTTATTGGGTCATTCCTGGACATTCAAGGGGATGTTGGAGGTGAAGAACATTCTGTTGATGACAGTGATTGTTCTCTTTGGATGCCCATTGC ACCCCCAGGTTACACAGCATTGGGCTGTGTAGCCCATGTTGGGAACCAACCACCACCAAATCATATCGTTCATTGCTTACGTTCTGATCTTTTAACATCA ACAAAATGTTCAGACTGCTTATTTAATATGCCGCCGAATAATCAATTAACATCTGGATTTAGCATATGGCGCCTTGATAATGCTATTGGCTCATTTTTGG CGCATTCTTCAACTGGTTGCCCCCTGAATGATAAATGTTATAACTTAAATCATTTGCTCGTCTGGAATTCAAATAGGGTTCCTCTGATAGGTTCAGTCTC AGATTTTAATTCTGATCCTGAAAATAATAATCAACAGACAAGCAAAAGTGTGAACACATCAGGATGGGATATCCTCAAGTCCATTTCAAAAGCCACTAAC TGCTATATGTCCACACCGAACTTTGAAAGAATTTGGTGGGACAAAGGTAGTGACCTCCGTCGTCCAGTCTCTATTTGGCGACCTATTGCACGTCGTGGTT ATGCAGTCTTGGGTGATTGCATCACTGAAGGGCTGGAACCTCCTGCACTAGGAATCATCTTCAAGAATGACAATCCTGATATATCTTTAAAACCTGTTCA ATTTACCAAAGTTTCCCATATTGGTGGGAAAGGGGTTGATGAAATTTTCTTCTGGTATCCTATAGCTCCTCCTGGTTATGTTTCTCTAGGTTGTGTTGTC ACCCGAATAGATGAAGCACCACGTGCAGATTTGCTTTGCTGCCCGAGGATGGATCTTGTTAGCCAAGCAAACATTCATGAGGTGCCTCTTTCGAGGTCTT CAAGCTCACGGGCTCCTCAGTGCTGGAGCATATGGAAAGTACAAAATCAGGCTTGTACTTTTATGGCTCGTTCTGACCTTAAAAAGCCATCAAGCCAATT GGCCTACATCATTGGTGACTCTGTGAAACCGAAGACTGAGGAAAACATAAATGCTGAGCTGAAGCTAAGATTCTTTTCTGTAACGATTTTGGACAGCTTA TGTGGAATGGTTTGATTTCTATGCCTATTATGAAAAGAATTGACATTGTTGATTTACCAATGATGAAATTTTGTATAAAGGAATTTTATTTTTTTGCAAT GCCAATACTGAACTCAACACCCATTTCAGATGAGACCCCTATTTGACACAACAATTACCAATATTAAGCTTGCAACACGTGGTGGACTTCAAGGGATGAA TGCAGTATTGATTTCTTCAATTGTTGCATCAACCTTCAATGCACAATTAGAGGCATGGGAGCCCCTTGTGGAGCCATTTGATGCCATATTCAAGTTTGAA ACTTATGATAACAATGCACAATCACAATTGGGGCTTGGGAAGAGAGTTCGAGTTTCTGCTACAAGTATCCTGAATGTAAATGTCAGCGCAGCAAATCTCG AATCCTTTGTGGGAAGCATTCTATCTTGGAGAAGACAATTAGAACTTGAACAAAAAGCATCAAAGCTACATATGGGGGTTGGTGGTCTTCAAAGCAAGGG GGAGGATGCAAGTTTTTCTGCACTAGACGAGGATGACTTGCAGACTGTGATACTAGAAAATAAACTTGGGTGTGATATTTTTGTCAAAAAAGTTGAGCAT GATGAGGAGATAGTTAACAAGCTACATCATGGTGATTGTACTTCTGTGTGGACTCCACCTCCTAGATTTTCGGAGAGGTTAAACGTTGCAGATGAATCTA GAGAAGCACGATATTATATTGCTGTACAGATACTTGAGGCCAAGGGTTTACCCATCGTTGATGATGGTAACAGCCATAACTTCTTCTGTGCTTTGCGTCT CGTCATTGACAGCCAAGCATCAGAGCAGCAAAAGCTTTTTCCCCAAAGTGCAAGAACAAAGTGTGTGAAGCCTGTAGTGTCAAGAACTAATGGTTGGGAA GTAGGCACCGTGAAATGGAATGAACTTTTCATATTTGAAGTTCCTAGAAAGGCCCCTGCGAAGTTGGAAATAGAGGTTACAAATCTAGCTGCAAAAGCTG GAAAAGGGGATGTTGTGGGTTCACTTTCATTTTCTGTTGGACATGGTGCAAATGTTCTGAGAAAGGTTGCTTCTGTGAGATTGTTTCATCAACCATATGA TTTTCAGAATATTAGAACGTTCCCACTTAGTAGAATGGTTGAACAAAGCAACGTTGAAGCCATGCACAACGGGTGCCTCTTTGCTTCAACTTCTTATTTC GAAAGAAACACAATTGCTAAAATTCAACAAGATATGGAAAGTGGGAATGTTATTGATGGAGACATTGGTTTTTGGGTAGGGCTTGGCCCAGAGGGGGAGT GGGAGAGTGTTCGGTCATTGCTTCCACTGTCAGTGGTTCCAAAATCATTAAATAATGAATACATTGGTATGGAAGTTGTCATGAAAAATGGAAAAAAGCA TGCAATTTTCAGGAGTCTTGTTACAGTAGTGAATGAGTCAGATGTTGTGTTGAATATTTTGACTTCCCTTGCCTCTAATGGCAGTGATCCCTTACTTGGG GCAAACAGTTCAAATAATGTTGTTGAAGAGGTCTTTCAAAATCAGTGTTATTCGTCATCAGGTTGGGGCAATAATTGGCCAGCTGTGCACCTTGACAATC CTGGCCACTGGAGCACAAGGGATTTCTCATTCTCATCTAAGGACTTCTTTGAACCTCCGCTTCCTCCTGGATGGAAATGGGCGTCGGGTTGGTCCATAGA TAAGTTTCAGTATGTTGACAAGGAAGGCTGGGCCTATGGACCTGACCTTAAAAAGTTAAAGTGGCCCCCTACTTCTTTGAAGTTTTCAACAAAATTAGCC TCTGATGTTGTGCGTCGAAGGCGCTGGGTTCGTACTCGACAAACCTTTTCTGATGAAGGTACTGAATGCTTGCAGAGCGGAGCAAATACCATACAGCCTA AGGCTTCTGCTGTTTTATCTTGGAGAAGTACGTTGAAAGACTCTAACCAATGTTTGCAAGTTCGACCTAACTTCGATAGTTCTCAGCCCTCCTACTCATG GGGTCGTGCAGTAGCTGCTGGTTCAAGTTACATATATAGCAAAGACAACCTATTAGATCCAGGTTCTAGACAAAATTCTGTGACGCCTTCTTTGAAGTTA AATGAGCTTGAGAAAAAGGATATACTGCTATGCTGTAATCCTAGTAGTGGAAGTAAACAATTATGGTTTAGTGTGAGTTCAGATGCCACAGTTCTTAATA CTGCACTAAATGTTCCTGTATATGATTGGAAAATATCTATCAACTCTCCCATGAAATTGGAGAATCGGCTTCCTTGTCCTGCTGAGTTTTCAATCTTGGA GAAAACAAAGGAAGGAAATTGTGTTGAGCTGCATCATGGTGTCATATCTTCTCGTCAGAGTGTACATATCTATTCAGCTGATATTCAGAAACCTGTGTAT CTGAATTTGTTTGTGCAGGGTGGTTGGGTTATGGAAAAGGCGGACCCTATTCTTGTACTGGATCCTTCTTTCTCCAATCACTTCTCATCTTTCTGGATGA TTCACCGGCAAAGTAGAAGGAAACTGCGTGTGAGCATTGAACATGATATGGGGGGCACAAGTGCTGCACCAAAAACCTTGAGAATTTTTGTCCCTTATTG GATTGTCAATGATTCTTCTCTTGCTTTGGCATATCGTGTGGTGGAAGTGGAACCTTTGGAAAATGCAGAGATAGATGCTGTCCATCTATCTAGAGCAGTT AAGTCTGCCAAAACAGCCTTGAAAAGTCCCATCAGCTCAATGGATAGAAAGCATTCTACTTCAAGGAGAAACCTTCAAGTACTTGAAGTAATTGAAGATA ACAGTCCGTTTCCTAGTATGCTTTCTCCACAAGATTATGCTGGTCGTAGTGGAGTTACAATGTTTCAATCTCAAAAAGATACATATTTGTCACCAAGGGT GGGCATTTCTGTTTCTATGCGCCATTCTGAAGTTTACAGTTCTGGGATTTCTCTGCTTGAGCTAGAAAACAAGGAACGTATTGATGTCAAGGCTTTCAAT TCTGATGGATCTTACCACAAACTTTCAGCATTGTTGAACATGACTTCAGACAGAACAAAGGTGATTCATTTCCAGCCACACACAATGTTTGTTAATAGGG TTGGACGTAGTCTCTGCCTGCAGCAATGTGATTCTCAATCAGCTGTATGGATTCATCCTACTGATCCTCCAAAACCTTTTGAGTGGCAGTCATCAGCTAA AGTTGAACTTTTGAAGTTGCGGATTGATGGCTACAAATGGAGTATGCCATTTAGTGTTAGCTATGAAGGTGTAATGCGGATTAGCTTGAAAAAAGATGTT GGGAATGACTCTATGCAATTAAGGGTATCAGTAAGAAGTGGTGCCAAGAGATCACGCTTTGAAGTTATTTTTCGTCCAAATTCATTGTCAAGTCCTTACA GGATTGAAAATCGCTCCATGTTCTTGCCCATCCGCTTTCGCCAAGTTGACGGTCTTGGTGATTCCTGGCAGCTGCTTCTTCCGAATTCAGCTGCTTCATT TTTGTGGGAAGATCTTGGTAGAAGACGTTTGTTGGAACTGTTGGTAGATGGTACTGACCCAATGAAATCACTGAAGTATGATATTGATGAAATTTCTGAT AATGAGCCCATCAGTGCAGCAGATGGACCAACAAGAGCCTTGCGTGTTACTATTGTAAAGGAAGAGAAAATCAATGTTGTTAAGATCAGTGACTGGATGC CAGAAACCGAACCTGCAGGAGTTCTGGGCAGAAGGAATTTATCATCAATGGGTGACTCTCAAAAGCAACAACTAATGTCAGCTACAGATGCTGAATTCCA CATCAATTTTGATCTTGCAGAGCTTGGAATATCTATTATAGATCATACGCCTGAGGAAATTTTATACTTGTCTGTTCAGAATCTTGTTATGGCATACTCA ACTGGTTTGGGATCTGGAATTAGTAGATTTAAACTCAGAATGACCGGGTTACAGGTGGACAATCAATTGCCGTTAACTCCAATGCCGGTTCTATTCAGGC CACAGAAAGCTGTGGCAGAAACTGATTATATCCTGAAATGTTCTGTGACAATGCAGTCAAATGGATCGTTGGATCTTTGTGTCTATCCATACATTGGTCT TCATGGGCCAGAAAGTTCTTCTGCCTTTTTGGTAAACATTCATGAACCTGTTATTTGGCGCCTTCATGAAATGATCCAACAGGTGAAGCTCAGTAGGCTG TACGATTCTCAAATAACTGCTGCATCAGTTGATCCAATCATTCAAATTGGCGTGCTTAATATGTCTGAAGTTCGACTCAGAGTGTCAATGGCTATGTCAC CCAGTCAAAGACCAAGGGGTGTGCTTGGGTTCTGGGCATCCTTAATGACTGCATTGGGTAACACAGAAAATATGCCTGTCAGGATAAACCAGAGGTTTCA TGAGAACATTACTATGAGGCAGAGTGCTATGATTAGCATGGCAACTTCAAACATCCAGAAGGATCTTCTTGGCCAACCACTTCAGCTTCTCTCAGGTGTT GATATACTGGGCAATGCAAGTAGTGCACTTGGACATATGAGTAAAGGTGTGGCTGCATTGTCTATGGACAAAAAGTTCATTCAAAGTCGGCAGAGACAGG AAAACAAAGGTGTGGAGGATTTTGGTGATGTTATTAGAGAGGGAGGTGGAGCATTTGCTAAAGGTTTATTTAGAGGGGTAACTGGCATTTTAACAAAGCC TCTTGAAGGAGCAAAAACTTCTGGTGTTGAGGGTTTTGTTCAGGGTTTTGGGAAAGGTATTATCGGTGTGGCTGCACAACCAGTGAGTGGAGTTCTGGAT CTTCTTTCAAAAACGACCGAAGGTGCTAATGCTATGAGAATGAAAATTGCATCTGCTATAACATCTGATGAACAACTTCTCCGGAGGAGATTGCCTCGCG TTATAAGTGGTGATAATTTGCTTCGACTATATGATGATTACAAAGCTCAAGGACAGGTCATATTGCAGTTGGCAGAATCAGGTTCTTTTTTCAGCCAGGT TGATCTTTTCAAAGTTCGGGGAAAATTTGCCCTAACGGATGCTTATGAAGATCACTTCATGCTTCCGAAAGGGAAAGTTCTAATTGTCACTCATGGAAGA GTCATACTATTGCAACAACCATCTAATATTATCGCTCAGAGGAAGTTCATCCCTGCAAGGGATCCTTGTTCAATACTTTGGGATATAATGTGGGATGACC TCGGTACAATGGAACTGACACATAGAAAAAAAGACAACCCAAAAGGTCTACCTTCACAACTCATCTTATATTTGCAATCTAGATCAATGGATATGAAAGA AAATGTTCGAATAGTAAAATGCACCCCTGAATCCCATCAAGCGCTTGAAGTTTACTCTTCAATTGAGCATGCATTGAGTACTTATGGCCCAGGTGCATCA AAGGGAATACTGAAAAATAAAGTGACAAAACCATATTCACCACTTGCTGCTGATGGTCCTAGTTCTGGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_195391; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_480974
| Blastp | Vacuolar protein sorting-associated protein 13C from Homo with 35.12% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 13C from Mus with 34.63% of identity |
| Eggnog | Vacuolar Protein(COG5043) |
| Kegg | Link to kegg annotations (54832) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431161.1) |
| Pfam | C2 domain (PF00168.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |