Ll_transcript_478944

• Id Trinity: TRINITY_DN52766_c1_g3_i4
• Name Transcript: Ll_transcript_478944
• Sequence: TAGAAACTTAGTCTGGTTTAATATCAAAAAAATTGTATCTTTGGATTTCTTGTCCTAAACTAAAGTTAGCATCAAATATCATAGTCAATTATCATAATAT ATTCATAATTCTGCACTTTCTTTATTGTTCCTTCTCAAGCACAAGATTTTAATCTCATCTCCATTCATTCATACTGGTTGCAGACAGATTATACCTTAAT ATATATGGAGGAATCTCTATAGACACAACCTTCAAGTGTATAGATCCACTCGCGGGTTGTTCTAGCTTAATCAGAGGTCTCGAGTTTGAGTCAGGCAGAC GTAGTTGTCTATAGTGGTCTTACGACTCGAACAGGCTATTCAATGGAATCTTCATCTTCTTCTAGTGTTACTCAAATCAAATATGATGTGTTCATCAGCT TTAGGGGCACAGATATAAGGTATGGTTTTCTTAGCCATTTGAAAAAGGAGCTAAGGCAGAAACAGGTTGATGCTTATGTGGATGATAGGCTTGAGAGTGG GGATGAAATATCACCTGCACTTGTAAAAGCCATTGAACAATCACTTATTTCTTTGATCATATTCTCAAAAGACTATGCTTCTTCAAAGTGGTGTTTGGAA GAGCTTGTGAAAATAGTTGAGTGCATGGAAAGGAATAAACAAATTGTTATTCCAGTTTTCTACAATGTTGATCCATCTGATGTACGGCATCAGAAGGGGA CTTATGGAGATGCATTTGCTATACATCAGAAAAAGAAAAGGAATCTGTCTAAGTTACAAAATTGGAGATCTGCTTTGAATATAGCTGCCAATCTTTCTGG ATTTCATTCATCAAAATATGGGGATGAAGTTAAGCTTATAGAAGAAGTTGTGAAAAGTTTGTTGGCAAGGTTGAATCTTATGTACCAAAGTGAGTTAACA GACCTTGTTGGAGTTGAAGAACGGATCGCAGATATAGAGTCACTATTGTTCCTGAAATCGACAATAGATGTTCGCGTGATTGGGATTTGGGGCATGGGAG GTATTGGTAAAACAACAATTGCAGCTGCAGTATTTAACCGTTTGTGTTTTGAGTATGAAGGATGTTGCTTTATGGCAAACATAAGAGAAGAATCAGAGAA ACATGGAACTATTTCTTTGAAGAATAAGATCCTCTCTATACTATTAAAGGAAAATGATCTATATATCGGTACGCCTAATGGAGTTCCTCCTTATGTAAAG AGAAGGCTGCGTCGTAAAAAGGTTCTTGTTGTTCTTGATGATATTAATGACTCAGAGCAACTAGAGAATTTGGTCGGAGAACTTGATTGGTTCGGACCCG GTAGCAGAATCATTGTGACAACAAGAGATAAACAAGTGCTTGGTAAAAGAGTTAATAGTATCTATGAGGCTAAGGCATTAAAATTTGATGAAGCTGTTAA GCTTTTCATTATGAATGCTTTCAAACAAATTAGTTGTCTCGACATGGAGTGGATTGAGCTATCAAGAAAGGTGATTCAGTATGCTAATGGAAATCCATTA GCTTTAAAAGTTTTGGGCTCTTTTCTTTACGGTAAGACGAAAATAGAGTGGGAAAGTCAATTGCAAAAGCTTAAGAAAATGCCGCATGCAAAAATTCAGA ATGTTTTGAGATTGACTTTTGATAAGTTGGATAGAGAAGAGAAGAACATATTTCTATATGTTGCATGTTTTCTGAAAGGATATGAATCACACCGAATAAT AGTTCTGCTTGATGCTTGTGGTTTCTCAACAATTATTGGGCTAAAAGTCCTTCAAGACAAAGCCCTTATAGTTGAAGCCAAGGGATCAGGAAGATCAATT GTATCAATGCATGATTTGATACAAGAAATGGGTTGGGAGATTGTTAGAGAAGAATCTATCGACGACCCGGGAAAACGCAGCAGGCTATGGGATCCTACTG ATATTCATCAAGTATTGAAAAATAATACAGGAACTAAAGCCATTAAAAGCATAACTCTGAATGTGTCAAAAATTGGTGAACTGTGCTTAAGTCCTCAAGT CTTTGATAGGATGCAACAGTTAAAATTTCTTAACTTTTCCCAACCTTATGGTGATGAGCAAATCTTGTATCTTCCTCAAGGGCTTACATCTTTGCCAAAT GACCTAAGACTTTTTCATTGGATTAGTTATCCTTTGAAATCCTTGCCTACTACATTCTGTGCAGAAAATCTTGTTGAGCTCAACTTGACTTGGAGCAGAG CCGAAAAACTTTGGGATGGAATCCAGAACCTTCAACATTTAAAGAAAATTGACCTCAGTAATTCCAAACATTTGCTAGAGCTACCGGATTTTTCAAAGGC CACAAATCTTGAAGAAATAGAACTATTTAGTTGCAGAAATTTGCTTAATGTTCATCCATCTATTTTATCTCTCCACAAGCTTGTAAGATTAAACCTGTTT TTTTGCAAAGCACTCACCAGTATCCGAAGCGATACTCATTTAAGATCCCTCCGCGATCTCTTCCTCGGTGGTTGCTCAAGGCTCAAGGAGTTTTCACTGA CTTCAGAGAACATGAAAGACTTGAACTTAAATTCAACTGCTATCAATGAATTGCCATCATCAATTGGGAGACTAAAAAAACTTGAAACTTTGACACTTGA TCACTGCAAAGGCCTAAACAATCTTCCAGACAAGGTTGCCGACCTTGGATCGCTACGTGTTCTTCGTATATATGGTTGCACACAACTTGATGCATCAAAT CTGCATGTCTTATTCAATGGTTTAAGGTCTTTGGAAACACTACTGCTAGAGGAATGTCTTAACTTACATGAAATTCCAGACAACATAAGTCTCCTATGTT CATTGCATCATTTGTTACTGAAAGGAACAAATGTTGAGAGATTCCCTACAAGCATTAAGCATCTTACAAATCTAGAAAAGCTTGACTTAAGTGATTGCAA GAGGCTTCATTTTCTACCAGAACTTCCACTATCCATAAAAGAGTTATATGCCACTAATTGCTCATCTTTGGAGACTGTAATGTTCCCTTTGAGGACTACT GATCTAGTACATGCATACAAGTCA
• Tissue: pods
• Gene name: LI_gene_195407;
• Additional information: details;

Expression of Ll_transcript_478944

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 3.1
• PS2: 0.6
• PS3: 0.7
• PW1: 3.1
• PW2: 1.8
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478944

• Blastp: TMV resistance protein N from Nicotiana with 38.39% of identity
• Blastx: TMV resistance protein N from Nicotiana with 36.88% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436492.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;