Ll_transcript_478951

• Id Trinity: TRINITY_DN52766_c1_g3_i6
• Name Transcript: Ll_transcript_478951
• Sequence: TAGAAACTTAGTCTGGTTTAATATCAAAAAAATTGTATCTTTGGATTTCTTGTCCTAAACTAAAGTTAGCATCAAATATCATAGTCAATTATCATAATAT ATTCATAATTCTGCACTTTCTTTATTGTTCCTTCTCAAGCACAAGATTTTAATCTCATCTCCATTCATTCATACTGGTTGCAGGTACAAAAATCTTCATA ATCATACAGATTATACCTTAATATATATGGAGGAATCTCTATAGACACAACCTTCAAGTGTATAGATCCACTCGCGGGTTGTTCTAGCTTAATCAGAGGT CTCGAGTTTGAGTCAGGCAGACGTAGTTGTCTATAGTGGTCTTACGACTCGAACAGGCTATTCAATGGAATCTTCATCTTCTTCTAGTGTTACTCAAATC AAATATGATGTGTTCATCAGCTTTAGGGGCACAGATATAAGGTATGGTTTTCTTAGCCATTTGAAAAAGGAGCTAAGGCAGAAACAGGTTGATGCTTATG TGGATGATAGGCTTGAGAGTGGGGATGAAATATCACCTGCACTTGTAAAAGCCATTGAACAATCACTTATTTCTTTGATCATATTCTCAAAAGACTATGC TTCTTCAAAGTGGTGTTTGGAAGAGCTTGTGAAAATAGTTGAGTGCATGGAAAGGAATAAACAAATTGTTATTCCAGTTTTCTACAATGTTGATCCATCT GATGTACGGCATCAGAAGGGGACTTATGGAGATGCATTTGCTATACATCAGAAAAAGAAAAGGAATCTGTCTAAGTTACAAAATTGGAGATCTGCTTTGA ATATAGCTGCCAATCTTTCTGGATTTCATTCATCAAAATATGGGGATGAAGTTAAGCTTATAGAAGAAGTTGTGAAAAGTTTGTTGGCAAGGTTGAATCT TATGTACCAAAGTGAGTTAACAGACCTTGTTGGAGTTGAAGAACGGATCGCAGATATAGAGTCACTATTGTTCCTGAAATCGACAATAGATGTTCGCGTG ATTGGGATTTGGGGCATGGGAGGTATTGGTAAAACAACAATTGCAGCTGCAGTATTTAACCGTTTGTGTTTTGAGTATGAAGGATGTTGCTTTATGGCAA ACATAAGAGAAGAATCAGAGAAACATGGAACTATTTCTTTGAAGAATAAGATCCTCTCTATACTATTAAAGGAAAATGATCTATATATCGGTACGCCTAA TGGAGTTCCTCCTTATGTAAAGAGAAGGCTGCGTCGTAAAAAGGTTCTTGTTGTTCTTGATGATATTAATGACTCAGAGCAACTAGAGAATTTGGTCGGA GAACTTGATTGGTTCGGACCCGGTAGCAGAATCATTGTGACAACAAGAGATAAACAAGTGCTTGGTAAAAGAGTTAATAGTATCTATGAGGCTAAGGCAT TAAAATTTGATGAAGCTGTTAAGCTTTTCATTATGAATGCTTTCAAACAAATTAGTTGTCTCGACATGGAGTGGATTGAGCTATCAAGAAAGGTGATTCA GTATGCTAATGGAAATCCATTAGCTTTAAAAGTTTTGGGCTCTTTTCTTTACGGTAAGACGAAAATAGAGTGGGAAAGTCAATTGCAAAAGCTTAAGAAA ATGCCGCATGCAAAAATTCAGAATGTTTTGAGATTGACTTTTGATAAGTTGGATAGAGAAGAGAAGAACATATTTCTATATGTTGCATGTTTTCTGAAAG GATATGAATCACACCGAATAATAGTTCTGCTTGATGCTTGTGGTTTCTCAACAATTATTGGGCTAAAAGTCCTTCAAGACAAAGCCCTTATAGTTGAAGC CAAGGGATCAGGAAGATCAATTGTATCAATGCATGATTTGATACAAGAAATGGGTTGGGAGATTGTTAGAGAAGAATCTATCGACGACCCGGGAAAACGC AGCAGGCTATGGGATCCTACTGATATTCATCAAGTATTGAAAAATAATACAGGAACTAAAGCCATTAAAAGCATAACTCTGAATGTGTCAAAAATTGGTG AACTGTGCTTAAGTCCTCAAGTCTTTGATAGGATGCAACAGTTAAAATTTCTTAACTTTTCCCAACCTTATGGTGATGAGCAAATCTTGTATCTTCCTCA AGGGCTTACATCTTTGCCAAATGACCTAAGACTTTTTCATTGGATTAGTTATCCTTTGAAATCCTTGCCTACTACATTCTGTGCAGAAAATCTTGTTGAG CTCAACTTGACTTGGAGCAGAGCCGAAAAACTTTGGGATGGAATCCAGAACCTTCAACATTTAAAGAAAATTGACCTCAGTAATTCCAAACATTTGCTAG AGCTACCGGATTTTTCAAAGGCCACAAATCTTGAAGAAATAGAACTATTTAGTTGCAGAAATTTGCTTAATGTTCATCCATCTATTTTATCTCTCCACAA GCTTGTAAGATTAAACCTGTTTTTTTGCAAAGCACTCACCAGTATCCGAAGCGATACTCATTTAAGATCCCTCCGCGATCTCTTCCTCGGTGGTTGCTCA AGGCTCAAGGAGTTTTCACTGACTTCAGAGAACATGAAAGACTTGAACTTAAATTCAACTGCTATCAATGAATTGCCATCATCAATTGGGAGACTAAAAA AACTTGAAACTTTGACACTTGATCACTGCAAAGGCCTAAACAATCTTCCAGACAAGGTTGCCGACCTTGGATCGCTACGTGTTCTTCGTATATATGGTTG CACACAACTTGATGCATCAAATCTGCATGTCTTATTCAATGGTTTAAGGTCTTTGGAAACACTACTGCTAGAGGAATGTCTTAACTTACATGAAATTCCA GACAACATAAGTCTCCTATGTTCATTGCATCATTTGTTACTGAAAGGAACAAATGTTGAGAGATTCCCTACAAGCATTAAGCATCTTACAAATCTAGAAA AGCTTGACTTAAGTGATTGCAAGAGGCTTCATTTTCTACCAGAACTTCCACTATCCATAAAAGAGTTATATGCCACTAATTGCTCATCTTTGGAGACTGT AATGTTCCCTTTGAGGACTACTGATCTAGTACATGCATACAAGTCA
• Tissue: pods
• Gene name: LI_gene_195407;
• Additional information: details;

Expression of Ll_transcript_478951

FPKM

• PAB: 1.2
• PNAB: 2.1
• PS1: 3.5
• PS2: 0
• PS3: 0.2
• PW1: 4.2
• PW2: 3.9
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478951

• Blastp: TMV resistance protein N from Nicotiana with 38.39% of identity
• Blastx: TMV resistance protein N from Nicotiana with 36.88% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436492.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;